Factsheet for Zm00001d024857_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d032249_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G18580.1	Zm00001d032249_P002	AT5G16560.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003796_P003	Maize	cytosol, mitochondrion	23.4	95.9
EES17718	Sorghum	nucleus, plastid	89.4	91.22
TraesCS1B01G118200.1	Wheat	cytosol, plastid	88.2	90.74
TraesCS1A01G090100.1	Wheat	cytosol, plastid	88.2	90.74
TraesCS1D01G098600.1	Wheat	cytosol, plastid	88.2	90.74
Zm00001d010862_P002	Maize	nucleus, plastid	87.0	88.24
VIT_05s0020g01710.t01	Wine grape	cytosol	82.8	86.97
Solyc01g067500.2.1	Tomato	cytosol	82.8	86.61
GSMUA_Achr1P14730_001	Banana	cytosol	83.4	85.45
KRH50907	Soybean	cytosol	80.2	84.07
KRH02218	Soybean	cytosol	79.8	83.65
CDY02615	Canola	nucleus	80.0	82.99
AT5G18580.1	Thale cress	nucleus	79.6	82.92
CDY58103	Canola	nucleus	79.4	82.37
Bra023686.1-P	Field mustard	nucleus	79.4	82.37
CDX70827	Canola	nucleus	77.0	81.74
CDX88930	Canola	nucleus	79.4	81.02
Bra002169.1-P	Field mustard	nucleus	77.0	80.21
CDX92599	Canola	nucleus	77.0	80.21
CDY13902	Canola	cytosol	68.4	76.51
GSMUA_Achr9P20260_001	Banana	cytosol, mitochondrion	17.8	68.99
Zm00001d019912_P001	Maize	mitochondrion	35.0	66.54
GSMUA_Achr9P20250_001	Banana	extracellular, golgi	35.2	56.23
Zm00001d053702_P008	Maize	cytosol	20.0	18.28
Zm00001d032708_P009	Maize	cytosol	18.8	17.41
Zm00001d014037_P004	Maize	cytosol	19.4	16.9
Zm00001d015665_P007	Maize	cytosol, plastid	19.6	16.78

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:103641393	MapMan:13.4.1.2.5	MapMan:18.4.24.1.2.4	UniProt:A0A1D6J2E1	ProteinID:AQK42207.1
ncoils:Coil	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:IPR002048	PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR12085
PANTHER:PTHR12085:SF3	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0008429081	EnsemblPlantsGene:Zm00001d024857	EnsemblPlants:Zm00001d024857_P002
EnsemblPlants:Zm00001d024857_T002	SEG:seg	:	:	:	:

Description

discordia1Discordia 1%3B Discordia1

Coordinates

chr10:+:90991479..90996600

Molecular Weight (calculated)

56775.7 Da

IEP (calculated)

4.742

GRAVY (calculated)

-0.347

Length

500 amino acids

Sequence
(BLAST)

001: MSTASGDGAD AGGDGAAASA PAGRRIPPAS SMPWVRNLRR FVGTGAGLGS EALMELETKR ILLEIFKERQ RKSAEAGSIP SFYKKKPEEG SISSRVQRLA
101: KYRFLKKQSE LLLNADDLDA MWVCLRENCV IDDATGAEKV RFLFDMNYED FCHIATVCTE QIGQKCKRFF SPSNFMKFEK DDSGRIAILP FYLYVMRTVS
201: LTQARIDMSE LDEDSDGFLQ PHEMEAYIRG LIPNLAQLRD MPTAFVQMYC RIAARKFFFF CDPHRRGKAC IKKVLLSNCL QELMELHQES EEEVTDTEQA
301: ENWFSLTSAQ RICGMPAGII VNNMFLALDK DTNGTLSKQE LKEYADGTLT EIFIERVFDE HVRRSKVGGG NSREMDFESF LDFVLALENK DTPEGLTYLF
401: RCLDLNGRGF LTTADIHTLF RDVHQKWIEG GNYELCIEDV RDEIWDMVKP ADPLRISLSD LLSCKQGGTV ASMLIDVRGF WAHDNRENLL QEEEEQVEEA

Best Arabidopsis Sequence Match ( AT5G18580.1 )
(BLAST)

001: MYSGSSDGES HDTSTQRKIP PASSMLWVRN LRRYIGSGAG LGSEALMELE TKRILLEIFK EKQQKSQEAG TIPSFYKKKP EEGSISQRVQ KLAKYRFLKK
101: QSDLLLNADD LAAMWVCLRE NCVIDDATGA EKMNYEDFCH IASVCTEQIG PKCRRFFSPS NFMKFEKDEA GRIAILPFYL YVMRTVSLTQ ARIDMSELDE
201: DSDGFLHSDE MESYIGGLIP NLAQLRDMPP AFNQMYCRIA SQKFFFFCDP HRRGRACIKK ILLSNCLQEL MELHQESEEE VTDTEQAENW FSLTSAQRIC
301: DMFLALDKDM SGSLCKQELK EYADGTLTEI FIERVFDEHV RRGKIVAGNS REMDFDSFLD FVLALENKDT PEGLTYLFRC LDLQGRGFLT TADIHSLFRD
401: VHQKWIEGGN YELCIEDVRD EIWDMVKPSD PLKITLGDLL GCKQGGTVAS MLIDVRGFWA HDNRENLLQE EEEPPEEESQ

Arabidopsis Description

TON2Probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FEE2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.