Factsheet for Zm00001d053702_P008

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES06429	Sorghum	cytosol	91.59	92.27
Zm00001d015665_P007	Maize	cytosol, plastid	90.31	84.59
TraesCS6A01G170400.1	Wheat	cytosol	81.72	83.24
TraesCS6B01G198600.1	Wheat	cytosol	81.17	82.84
HORVU6Hr1G034840.3	Barley	cytosol	81.17	82.68
TraesCS6D01G160100.1	Wheat	cytosol	80.99	82.65
Os02t0191700-00	Rice	plasma membrane	82.08	81.34
Zm00001d032708_P009	Maize	cytosol	64.72	65.56
Zm00001d014037_P004	Maize	cytosol	63.99	60.98
Zm00001d024857_P002	Maize	cytosol	18.28	20.0
Zm00001d010862_P002	Maize	nucleus, plastid	17.73	19.68
Zm00001d019912_P001	Maize	mitochondrion	8.41	17.49
Zm00001d003796_P003	Maize	cytosol, mitochondrion	3.47	15.57

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.238.220	Gene3D:1.10.238.230	EntrezGene:100384234	MapMan:18.4.24.1.2.4	UniProt:A0A1D6QRR0
ProteinID:AQK60174.1	ProteinID:AQK60176.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	InterPro:IPR002048	PFAM:PF13499	ScanProsite:PS00018	PANTHER:PTHR14095
PANTHER:PTHR14095:SF7	SUPFAM:SSF47473	UniParc:UPI000844C297	EnsemblPlantsGene:Zm00001d053702	EnsemblPlants:Zm00001d053702_P008	EnsemblPlants:Zm00001d053702_T008
SEG:seg	:	:	:	:	:

Description

Serine/threonine protein phosphatase 2A regulatory subunit B''alpha

Coordinates

chr4:+:239551734..239557534

Molecular Weight (calculated)

62512.6 Da

IEP (calculated)

5.290

GRAVY (calculated)

-0.259

Length

547 amino acids

Sequence
(BLAST)

001: MVEAPAGLSA AAQVSALPLQ VDLLQLPPEV PAPGDPALRG VLDSLFAHWL SLPNTAVLLA SLVHKAKASG GGAAAAGAGM LPSMLLQGGA AVPPLSPRSP
101: RLSRRPSSLG VAPPNHAASP LRPPAARPAK EVIPQFYFRD GRPPPYEVRR QCISTVDQLF AGHSNGLRAP EFRMVTRELC KLPTFFTTVL FDKIDKESTG
201: FVTREAFIDF WVNNNLMSMD SATQVFTILK QQNHNYLTKE DFKPILKDLL DNHPGLEFLK STPEFQERYA ETVIYRIFYC LNRIGSGHLT LRELKRGNLL
301: NALRHADDEE DINKVLRYFS YEHFYVIYCK FWELDTDHDF FIDKENLIKY GNHALTYRIV DRIFSEVPRK FTSKVEGKMG YEDFVHFVLS EEDKSSAPSQ
401: EYWYFAWFTC IDLDGNGILT HIEIQFFFEE QLHRMECMAQ EPVLFEDILC QLIDMIGPEN DSYLTLKDFR RCKLSGHFFN ILFNLNKFMA FEARDPFLIR
501: QMREEPSLTD WDRFARREYV RLAMEEDGED ASNASGDVWD ESLESPF

Best Arabidopsis Sequence Match ( AT1G54450.1 )
(BLAST)

001: MESITLDIEL LQLPETSPMS MKSNQDFVKK LFDQWLALPE TNRLVTSLVN DAKAGVALNV MCGGGSSGTN SGSNSPLASM FPARNGPPLS PRNSTGSPRI
101: ARQRTGLSNL SSPLKVVSDH VKELIPQFYF EDGRPPPNDL KEQCIAKINS LFYGHEDGLQ LQEFKLVTTE ICKVPSFFST SIFKKVDTNN TGFVKREDFI
201: DYWVKGNMLT KEITSQVFTI LKQPDHNYLV QDDFKPVLQE LLATHPGLEF LQGTPEFQDR YAETVIYRIY YYINRSGNGH LTLRELKRGN LVDAMQHADE
301: EEDINKVLRY FSYEHFYVIY CKFWELDTDH DFLIDKENLI RYSNHALTYR IVDRIFSQVP RKFTSKTEGK MGYEDFVYFI LAEEDKSSEP SLEYWFKCID
401: LDANGVLTRN ELQFFYEEQL HRMECMAQEA VLFEDILCQL FDMVKPEDEG FICLNDLKGS KLSGNVFNIL FNLNKFMAFE TRDPFLIRQE RANPTWTEWD
501: RFAHREYIRL SMEEDVEDAS NGSAEAWDDS LEVPF

Arabidopsis Description

B''DELTAProbable serine/threonine protein phosphatase 2A regulatory subunit B''delta [Source:UniProtKB/Swiss-Prot;Acc:Q9SLI8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.