Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 5
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G170400.1 | Wheat | cytosol | 97.58 | 97.58 |
| TraesCS6B01G198600.1 | Wheat | cytosol | 97.02 | 97.2 |
| TraesCS6D01G160100.1 | Wheat | cytosol | 96.83 | 97.01 |
| Os02t0191700-00 | Rice | plasma membrane | 86.78 | 84.42 |
| EES06429 | Sorghum | cytosol | 82.87 | 81.95 |
| Zm00001d053702_P008 | Maize | cytosol | 82.68 | 81.17 |
| Zm00001d015665_P007 | Maize | cytosol, plastid | 82.31 | 75.68 |
| HORVU1Hr1G040980.1 | Barley | cytosol | 63.5 | 63.03 |
Protein Annotations
| EMBL:AK363798 | EnsemblPlants:HORVU6Hr1G034840.3 | EnsemblPlantsGene:HORVU6Hr1G034840 | Gene3D:1.10.238.10 | Gene3D:1.10.238.220 | Gene3D:1.10.238.230 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom |
| InterPro:IPR002048 | PANTHER:PTHR14095 | PANTHER:PTHR14095:SF7 | PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 |
| SEG:seg | SUPFAM:SSF47473 | UniParc:UPI0002006603 | UniProt:F2DIT0 | MapMan:18.4.24.1.2.4 | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DIT0]
Coordinates
chrchr6H:-:165333050..165337605
Molecular Weight (calculated)
61958.9 Da
IEP (calculated)
5.006
GRAVY (calculated)
-0.318
Length
537 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAAPDLSAV SALALQVDLL QLPPEIPAPG APALRGVLDH LFAHWLSLPD TVALVSCLAQ KAKANGVGGF AGGAMLPSMM MQGGANVPPL SPRSPRLSRK
101: PSGVGGHSNR SASPLRPSTA RAVKEVIPQF YFRDGRPLPY EQKRQCVSIV EQLFAGHSNG LRIQEFRMVT RELCKLPSFF TTVLFGKIDK DNTEFITRDA
201: FMDFWVNSNM MTMDSATQVF TILKQPDHDY LTKEDFKPVL RDLLDNHPGL EFLKSTPEFQ ERYAETVVYR IFYCLNRIGS GLLSLRELKR GNLLDSLRHA
301: DDEEDINKVL RYFSYEHFYV IYCKFWELDT DHDFFIDKEN LIKYGNHALT YRIVDRIFSE VPRKFTSKVP GKMCYEDFVH FILSEEDKSS EPSQDYWFKC
401: IDLDGNNILT HNELQYFFEE QLHRMECMAQ EPVLFEDILC QLVDMIGPED DTFFIIKDFR RCKLSGHFFN VLFNLNKFMA FESRDPFLIR QMREEPSLTD
501: WDRFARREYI RLAMEEDGED ASNASGDVWD ESLESPF
101: PSGVGGHSNR SASPLRPSTA RAVKEVIPQF YFRDGRPLPY EQKRQCVSIV EQLFAGHSNG LRIQEFRMVT RELCKLPSFF TTVLFGKIDK DNTEFITRDA
201: FMDFWVNSNM MTMDSATQVF TILKQPDHDY LTKEDFKPVL RDLLDNHPGL EFLKSTPEFQ ERYAETVVYR IFYCLNRIGS GLLSLRELKR GNLLDSLRHA
301: DDEEDINKVL RYFSYEHFYV IYCKFWELDT DHDFFIDKEN LIKYGNHALT YRIVDRIFSE VPRKFTSKVP GKMCYEDFVH FILSEEDKSS EPSQDYWFKC
401: IDLDGNNILT HNELQYFFEE QLHRMECMAQ EPVLFEDILC QLVDMIGPED DTFFIIKDFR RCKLSGHFFN VLFNLNKFMA FESRDPFLIR QMREEPSLTD
501: WDRFARREYI RLAMEEDGED ASNASGDVWD ESLESPF
001: MESITLDIEL LQLPETSPMS MKSNQDFVKK LFDQWLALPE TNRLVTSLVN DAKAGVALNV MCGGGSSGTN SGSNSPLASM FPARNGPPLS PRNSTGSPRI
101: ARQRTGLSNL SSPLKVVSDH VKELIPQFYF EDGRPPPNDL KEQCIAKINS LFYGHEDGLQ LQEFKLVTTE ICKVPSFFST SIFKKVDTNN TGFVKREDFI
201: DYWVKGNMLT KEITSQVFTI LKQPDHNYLV QDDFKPVLQE LLATHPGLEF LQGTPEFQDR YAETVIYRIY YYINRSGNGH LTLRELKRGN LVDAMQHADE
301: EEDINKVLRY FSYEHFYVIY CKFWELDTDH DFLIDKENLI RYSNHALTYR IVDRIFSQVP RKFTSKTEGK MGYEDFVYFI LAEEDKSSEP SLEYWFKCID
401: LDANGVLTRN ELQFFYEEQL HRMECMAQEA VLFEDILCQL FDMVKPEDEG FICLNDLKGS KLSGNVFNIL FNLNKFMAFE TRDPFLIRQE RANPTWTEWD
501: RFAHREYIRL SMEEDVEDAS NGSAEAWDDS LEVPF
101: ARQRTGLSNL SSPLKVVSDH VKELIPQFYF EDGRPPPNDL KEQCIAKINS LFYGHEDGLQ LQEFKLVTTE ICKVPSFFST SIFKKVDTNN TGFVKREDFI
201: DYWVKGNMLT KEITSQVFTI LKQPDHNYLV QDDFKPVLQE LLATHPGLEF LQGTPEFQDR YAETVIYRIY YYINRSGNGH LTLRELKRGN LVDAMQHADE
301: EEDINKVLRY FSYEHFYVIY CKFWELDTDH DFLIDKENLI RYSNHALTYR IVDRIFSQVP RKFTSKTEGK MGYEDFVYFI LAEEDKSSEP SLEYWFKCID
401: LDANGVLTRN ELQFFYEEQL HRMECMAQEA VLFEDILCQL FDMVKPEDEG FICLNDLKGS KLSGNVFNIL FNLNKFMAFE TRDPFLIRQE RANPTWTEWD
501: RFAHREYIRL SMEEDVEDAS NGSAEAWDDS LEVPF
Arabidopsis Description
B''DELTAProbable serine/threonine protein phosphatase 2A regulatory subunit B''delta [Source:UniProtKB/Swiss-Prot;Acc:Q9SLI8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.