Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 2
- golgi 2
- plasma membrane 2
- endoplasmic reticulum 2
- vacuole 2
- cytosol 3
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
28056797
|
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G170400.1 | Wheat | cytosol | 84.78 | 87.15 |
| TraesCS6B01G198600.1 | Wheat | cytosol | 84.6 | 87.13 |
| TraesCS6D01G160100.1 | Wheat | cytosol | 84.42 | 86.94 |
| HORVU6Hr1G034840.3 | Barley | cytosol | 84.42 | 86.78 |
| EES06429 | Sorghum | cytosol | 82.97 | 84.35 |
| Zm00001d053702_P008 | Maize | cytosol | 81.34 | 82.08 |
| Zm00001d015665_P007 | Maize | cytosol, plastid | 81.7 | 77.23 |
| Os10t0476600-01 | Rice | cytosol, plasma membrane, plastid | 65.22 | 66.54 |
Protein Annotations
| Gene3D:1.10.238.10 | Gene3D:1.10.238.220 | Gene3D:1.10.238.230 | MapMan:18.4.24.1.2.4 | EntrezGene:4328580 | ProteinID:BAD34016.1 |
| ProteinID:BAS77407.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:IPR002048 | EnsemblPlantsGene:Os02g0191700 | EnsemblPlants:Os02t0191700-00 | PFAM:PF13499 | ScanProsite:PS00018 |
| PFscan:PS50222 | PANTHER:PTHR14095 | PANTHER:PTHR14095:SF7 | UniProt:Q69M01 | SUPFAM:SSF47473 | UniParc:UPI0000358D32 |
| RefSeq:XP_015622760.1 | SEG:seg | : | : | : | : |
Description
EF-HAND 2 domain containing protein. (Os02t0191700-00)
Coordinates
chr2:-:5071413..5075530
Molecular Weight (calculated)
62512.7 Da
IEP (calculated)
4.953
GRAVY (calculated)
-0.225
Length
552 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAADLSAAA EALALQVDLL QLPPEIPAPG APALSVVLDR LFAHWLTLPD TVALVGCLVQ KAKASGGGGG GGGGGGAAGA AVGPGSAMLP SMMMQGGAAV
101: PPLSPRSPRL SRRPSGVGTG GQSNRSASPL RPATARAVKE VIPQFYFQDG RPPTYELKKQ CIAIVDQLFA GHSNGLRIQE FRLVTRELCK LPSFFTTVLF
201: GKIDKENTGF VTRDAFIDFW LNSNMVTMDV ATQVFIILKQ KNQDFLTKED FKPVLRDLLD NHPGLEFLKS TPEFQERYAE TVVYRIFYCL SRIGGGHLIL
301: RELKRGNLID ALRHADDEED INKVLKYFSY EHFYVIYCKF WELDTDHDFF IDKENLIKYG NHALTYRIVD RIFSEVPRKF TSKVEGKMGY EDFVHFILSE
401: EDKSSEPSQE YWFRCIDVDG NGILTHNELQ FFFEEQLHRM ECMAQEPVLF EDILCQLIDM IGPENETFFT LKDFRRCKLS GHFFNILFNL NKFMAFEARD
501: PFLIRQMREE PSLTDWDRFA RREYIRLAME EDGEDASNAS GDVWDESLES PF
101: PPLSPRSPRL SRRPSGVGTG GQSNRSASPL RPATARAVKE VIPQFYFQDG RPPTYELKKQ CIAIVDQLFA GHSNGLRIQE FRLVTRELCK LPSFFTTVLF
201: GKIDKENTGF VTRDAFIDFW LNSNMVTMDV ATQVFIILKQ KNQDFLTKED FKPVLRDLLD NHPGLEFLKS TPEFQERYAE TVVYRIFYCL SRIGGGHLIL
301: RELKRGNLID ALRHADDEED INKVLKYFSY EHFYVIYCKF WELDTDHDFF IDKENLIKYG NHALTYRIVD RIFSEVPRKF TSKVEGKMGY EDFVHFILSE
401: EDKSSEPSQE YWFRCIDVDG NGILTHNELQ FFFEEQLHRM ECMAQEPVLF EDILCQLIDM IGPENETFFT LKDFRRCKLS GHFFNILFNL NKFMAFEARD
501: PFLIRQMREE PSLTDWDRFA RREYIRLAME EDGEDASNAS GDVWDESLES PF
001: MVDTVIPGDM ACLDADLLQL QEMSSFVLNS KPGFTQKLFD QWLSLPEAQR QVGSLLKDAV AGAPINVTGS ASGSNSATIP SMFPAGSAPP LSPRSCGSPR
101: TTKQRAPSNL GSTLKVVNEP VKEPIPQFYF QNGRPPPSEI KEQCMFRINH FFYGHMDGLQ IQEFKLVTRE ICKLPSFFST SLFRKIDLNN TGFVTRDAFI
201: DFWVNGNMLI MDTTTQIFKI LKQKDQSFIV KDDFKPLLKE LLATHPGLEF LQSTPEFQER YAETVTYRIF YYINRSGNGR ITFRELKRGN LIDAMLHADE
301: EEDINKVLRY FSYEHFYVIY CKFWELDTDH DFLIDKENLM RYGNHALTYR IVDRIFSQVA RKFTNKVEGK MGYEDFVYFI LAEEDKSSVP SLEYWFKCID
401: LDANGIITRN EMQFFYEEQL HRMECMAQEA VLFEDILCQM IDMIGPENES HITLHDLKGS KLSGNVFNIL FNLNKFMAFE TRDPFLIRQE RENPTLTDWD
501: RFAHREYIRL SMEEDVEDAS NGSAEVWDES SLEAPF
101: TTKQRAPSNL GSTLKVVNEP VKEPIPQFYF QNGRPPPSEI KEQCMFRINH FFYGHMDGLQ IQEFKLVTRE ICKLPSFFST SLFRKIDLNN TGFVTRDAFI
201: DFWVNGNMLI MDTTTQIFKI LKQKDQSFIV KDDFKPLLKE LLATHPGLEF LQSTPEFQER YAETVTYRIF YYINRSGNGR ITFRELKRGN LIDAMLHADE
301: EEDINKVLRY FSYEHFYVIY CKFWELDTDH DFLIDKENLM RYGNHALTYR IVDRIFSQVA RKFTNKVEGK MGYEDFVYFI LAEEDKSSVP SLEYWFKCID
401: LDANGIITRN EMQFFYEEQL HRMECMAQEA VLFEDILCQM IDMIGPENES HITLHDLKGS KLSGNVFNIL FNLNKFMAFE TRDPFLIRQE RENPTLTDWD
501: RFAHREYIRL SMEEDVEDAS NGSAEVWDES SLEAPF
Arabidopsis Description
B''GAMMAProbable serine/threonine protein phosphatase 2A regulatory subunit B''gamma [Source:UniProtKB/Swiss-Prot;Acc:Q8VZQ4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.