Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G160100.1 | Wheat | cytosol | 98.69 | 98.69 |
| TraesCS6A01G170400.1 | Wheat | cytosol | 98.32 | 98.14 |
| HORVU6Hr1G034840.3 | Barley | cytosol | 97.2 | 97.02 |
| Os02t0191700-00 | Rice | plasma membrane | 87.13 | 84.6 |
| EES06429 | Sorghum | cytosol | 83.21 | 82.14 |
| Zm00001d053702_P008 | Maize | cytosol | 82.84 | 81.17 |
| Zm00001d015665_P007 | Maize | cytosol, plastid | 82.65 | 75.86 |
| TraesCS1B01G171200.1 | Wheat | cytosol | 64.37 | 63.77 |
| TraesCS1B01G118200.1 | Wheat | cytosol, plastid | 17.91 | 19.75 |
Protein Annotations
| Gene3D:1.10.238.10 | Gene3D:1.10.238.220 | Gene3D:1.10.238.230 | MapMan:18.4.24.1.2.4 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS |
| InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | InterPro:IPR002048 | PFAM:PF13499 |
| ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR14095 | PANTHER:PTHR14095:SF7 | SUPFAM:SSF47473 | EnsemblPlantsGene:TraesCS6B01G198600 |
| EnsemblPlants:TraesCS6B01G198600.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6B:+:237696479..237699959
Molecular Weight (calculated)
61858.9 Da
IEP (calculated)
5.006
GRAVY (calculated)
-0.300
Length
536 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVAPDLSAV SALALQVDLL QLPPEIPAPG APALRGVLDH LFAHWLSLPD TVALVSCLAQ KAKANGAGFA GGAMLPSMMM QGGANVPPLS PRSPRLSRKP
101: SGVGGHSNRC ASPLRPATAR AVKEVIPQFY FRDGRPLPYE QKRQCISIVE QLFAGHSNGL RIQEFRMVTR ELCKLPSFFT TVLFGKIDKD NTEFVSRDAF
201: MDFWVNSNMM TMDSATQVFT ILKQPDHDYL TKEDFKPVLR DLLDNHPGLE FLKSTPEFQE RYAETVVYRI FYCLNRIGNG LLSLRELKRG NLLDSLRHAD
301: DEEDINKVLR YFSYEHFYVI YCKFWELDTD HDFFIDKENL IKYGNHALTY RIVDRIFSEV PRKFTSKIPG KMCYEDFVHF ILSEEDKSSE PSQDYWFKCI
401: DLDGNGILTH IELQYFFEEQ LHRMECMAQE PVLFEDILCQ LVDMIGPEDD TFFTIKDFRR CKLSGHFFNV LFNLNKFMAF ESRDPFLIRQ MREEPSLTDW
501: DRFARREYIR LAMEEDGEDA SNASGDVWDE SLESPF
101: SGVGGHSNRC ASPLRPATAR AVKEVIPQFY FRDGRPLPYE QKRQCISIVE QLFAGHSNGL RIQEFRMVTR ELCKLPSFFT TVLFGKIDKD NTEFVSRDAF
201: MDFWVNSNMM TMDSATQVFT ILKQPDHDYL TKEDFKPVLR DLLDNHPGLE FLKSTPEFQE RYAETVVYRI FYCLNRIGNG LLSLRELKRG NLLDSLRHAD
301: DEEDINKVLR YFSYEHFYVI YCKFWELDTD HDFFIDKENL IKYGNHALTY RIVDRIFSEV PRKFTSKIPG KMCYEDFVHF ILSEEDKSSE PSQDYWFKCI
401: DLDGNGILTH IELQYFFEEQ LHRMECMAQE PVLFEDILCQ LVDMIGPEDD TFFTIKDFRR CKLSGHFFNV LFNLNKFMAF ESRDPFLIRQ MREEPSLTDW
501: DRFARREYIR LAMEEDGEDA SNASGDVWDE SLESPF
001: MESITLDIEL LQLPETSPMS MKSNQDFVKK LFDQWLALPE TNRLVTSLVN DAKAGVALNV MCGGGSSGTN SGSNSPLASM FPARNGPPLS PRNSTGSPRI
101: ARQRTGLSNL SSPLKVVSDH VKELIPQFYF EDGRPPPNDL KEQCIAKINS LFYGHEDGLQ LQEFKLVTTE ICKVPSFFST SIFKKVDTNN TGFVKREDFI
201: DYWVKGNMLT KEITSQVFTI LKQPDHNYLV QDDFKPVLQE LLATHPGLEF LQGTPEFQDR YAETVIYRIY YYINRSGNGH LTLRELKRGN LVDAMQHADE
301: EEDINKVLRY FSYEHFYVIY CKFWELDTDH DFLIDKENLI RYSNHALTYR IVDRIFSQVP RKFTSKTEGK MGYEDFVYFI LAEEDKSSEP SLEYWFKCID
401: LDANGVLTRN ELQFFYEEQL HRMECMAQEA VLFEDILCQL FDMVKPEDEG FICLNDLKGS KLSGNVFNIL FNLNKFMAFE TRDPFLIRQE RANPTWTEWD
501: RFAHREYIRL SMEEDVEDAS NGSAEAWDDS LEVPF
101: ARQRTGLSNL SSPLKVVSDH VKELIPQFYF EDGRPPPNDL KEQCIAKINS LFYGHEDGLQ LQEFKLVTTE ICKVPSFFST SIFKKVDTNN TGFVKREDFI
201: DYWVKGNMLT KEITSQVFTI LKQPDHNYLV QDDFKPVLQE LLATHPGLEF LQGTPEFQDR YAETVIYRIY YYINRSGNGH LTLRELKRGN LVDAMQHADE
301: EEDINKVLRY FSYEHFYVIY CKFWELDTDH DFLIDKENLI RYSNHALTYR IVDRIFSQVP RKFTSKTEGK MGYEDFVYFI LAEEDKSSEP SLEYWFKCID
401: LDANGVLTRN ELQFFYEEQL HRMECMAQEA VLFEDILCQL FDMVKPEDEG FICLNDLKGS KLSGNVFNIL FNLNKFMAFE TRDPFLIRQE RANPTWTEWD
501: RFAHREYIRL SMEEDVEDAS NGSAEAWDDS LEVPF
Arabidopsis Description
B''DELTAProbable serine/threonine protein phosphatase 2A regulatory subunit B''delta [Source:UniProtKB/Swiss-Prot;Acc:Q9SLI8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.