Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G084800.1 | Wheat | nucleus | 97.76 | 97.63 |
| TraesCS5B01G090800.2 | Wheat | nucleus | 94.01 | 94.88 |
| HORVU5Hr1G022070.5 | Barley | plasma membrane | 90.65 | 89.23 |
| KXG23720 | Sorghum | mitochondrion, nucleus | 59.35 | 59.47 |
| Os12t0566200-01 | Rice | nucleus, plasma membrane | 9.68 | 56.54 |
| Zm00001d030659_P003 | Maize | mitochondrion, nucleus | 55.86 | 56.46 |
| Zm00001d041592_P002 | Maize | mitochondrion | 54.87 | 55.28 |
| GSMUA_Achr1P18410_001 | Banana | nucleus | 27.54 | 28.83 |
| GSMUA_Achr7P05560_001 | Banana | nucleus | 26.94 | 27.56 |
| KRH03258 | Soybean | mitochondrion, nucleus | 26.42 | 25.54 |
| KRH57096 | Soybean | mitochondrion, nucleus | 25.89 | 24.97 |
| VIT_17s0000g08810.t01 | Wine grape | cytosol | 26.02 | 24.75 |
| Solyc03g112660.2.1 | Tomato | mitochondrion | 24.77 | 24.5 |
| CDX92648 | Canola | nucleus | 22.33 | 24.49 |
| Bra013824.1-P | Field mustard | cytosol | 21.74 | 24.41 |
| CDY34301 | Canola | nucleus | 21.8 | 24.11 |
| CDY11025 | Canola | nucleus | 22.07 | 24.05 |
| Bra019213.1-P | Field mustard | nucleus | 22.0 | 23.96 |
| CDY03428 | Canola | nucleus | 21.61 | 23.91 |
| AT4G24680.1 | Thale cress | nucleus | 22.46 | 23.9 |
| PGSC0003DMT400046782 | Potato | nucleus | 16.93 | 19.48 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G097200.2 | EnsemblPlantsGene:TraesCS5D01G097200 | InterPro:MOS1-like | ncoils:Coil | PANTHER:PTHR34805 | SEG:seg |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5D:-:107778024..107785030
Molecular Weight (calculated)
164295.0 Da
IEP (calculated)
10.038
GRAVY (calculated)
-1.098
Length
1518 amino acids
Sequence
(BLAST)
(BLAST)
0001: MQVQAHITFH LGPSADRSAR AFFGPFSPSY LWAAPTRKSG MTVLGKIPKP INLPSQRLEN QGLDPNVEIV PKGTLTWGSK PGPTTPNAWN SSSLLSPKKD
0101: GNSGAPSQFN GRPSSGGGSR PSTAGSESLD SPNAWGPNSR PSSASGTLPS QNVPVVTNRP RSAETRPGSS QLSRFADNPS DNMNVSIRTV DRSGSSHGHA
0201: FTLSTGDFPT LGSEKISESN SQRGHSSKGR PTSSSGKDGT QNDTGKSLSA GSGEVVRPPN NQPADIMKTD QQAHDGSAPF PATGPPNGAQ QPQPYPPNYC
0301: MPPPQFDSWR APPGHPPEGM WHRGPGGPYR PVGPSSNFPV EPFPYYGQFP PNSEAAARQG SGHGGYHSKN ADAYHSMTPT SYVMNQPVIP ARPVYQGPIP
0401: YDGYYAPQRP NFNNANVRDS PFIGGPHQPG ILNQFPNQNE KFQPGHSPSR AVKHEASPKE LSESDRVQLI CRGQTRILHD NPDRLVGPGE VERKSQPAPP
0501: LLPHPDGNRN DVNTKADTRN TPSERNMVLM KSVHDNRGPN RTSHSSVLEN AHSHPRETDD GAHLKKLKED NLPLDQQPII KKNAALIEKI GSLNNKARNV
0601: DARNVAEAFS NKEIKEKQLK NADSKADRVI KDVPSTPAIT AFASAYGQAA CVSPRSPVVQ KLQKGPNDGG VVGPLHSHFA EASKSGKLGV STHDRTHRRA
0701: DSSRNSHHGP AKDMPPNNTT GHGRGENYAT ESLPVVQVRN SQHDQPLEHV SQLPPDDMPA SPDYESQRVK MRELAVQRAK QLQAEEEERT KRQKAKALAK
0801: LEELNKRSSV HQKDSSDPPP ENDDVRNKQK AGVDGTTEPA SSTAESHDVT VLDNVSILQP PNEPKDTAVP AQPMSTLLHT EGTGKDPSGH NTSTSGMNTQ
0901: SNMTEHIAHK SISLSHDVSV PKPRQGNRKR HAVSEDKILG EKSSVAVNTE NVKKAVEVSL DTSTAVVTSH DDPPAHSKKS ARNSRNKKKV DDAPATSKYP
1001: PMVLGQQNTP GISSEPKIKT AGVIISSSIL PAENTVLTVG SITVGGISFG SFNQERLKLP EEAQSTANSR PKPQQAKGSK KIQHAIRPVE KPHGNESVVW
1101: APVKPSGWNE PSEEANVAVA ARPKPIGKGT TDGENVTRTK RAEMERYVPK PLSKELQQQN LEQNLPVEKS SVENKSNDNE KLTAAKEPKK WEDRKTSKGH
1201: GKSHSSWRRR NTDDSSSVVP IPSERADSYQ ESHEVQRPSD KHPQLEPDKQ ADYAAGNSLA PAEAVELPAS AAKEHAAANR QRRQHVKGPK NEASNYSNEN
1301: RDGRKDVNHM STRGMDANSS EHRNMSKPEV KSSAAHSRAH WKPKSSHSQN NSQGNNTTEG QVDSATLQDS SNRNSNQGKG DMTNVDENQK GESHENAEQQ
1401: QLNHATRRQG QHNGRYHRGS SAHRGRGYDA GQPSHGANAE RRKGSTHLEY QPVGSNKPSD FQQNPSADGQ SAGPPAPGPV YRERGHNRGH RPPGGHFVKR
1501: NPAPAPAPAP APNSYREE
0101: GNSGAPSQFN GRPSSGGGSR PSTAGSESLD SPNAWGPNSR PSSASGTLPS QNVPVVTNRP RSAETRPGSS QLSRFADNPS DNMNVSIRTV DRSGSSHGHA
0201: FTLSTGDFPT LGSEKISESN SQRGHSSKGR PTSSSGKDGT QNDTGKSLSA GSGEVVRPPN NQPADIMKTD QQAHDGSAPF PATGPPNGAQ QPQPYPPNYC
0301: MPPPQFDSWR APPGHPPEGM WHRGPGGPYR PVGPSSNFPV EPFPYYGQFP PNSEAAARQG SGHGGYHSKN ADAYHSMTPT SYVMNQPVIP ARPVYQGPIP
0401: YDGYYAPQRP NFNNANVRDS PFIGGPHQPG ILNQFPNQNE KFQPGHSPSR AVKHEASPKE LSESDRVQLI CRGQTRILHD NPDRLVGPGE VERKSQPAPP
0501: LLPHPDGNRN DVNTKADTRN TPSERNMVLM KSVHDNRGPN RTSHSSVLEN AHSHPRETDD GAHLKKLKED NLPLDQQPII KKNAALIEKI GSLNNKARNV
0601: DARNVAEAFS NKEIKEKQLK NADSKADRVI KDVPSTPAIT AFASAYGQAA CVSPRSPVVQ KLQKGPNDGG VVGPLHSHFA EASKSGKLGV STHDRTHRRA
0701: DSSRNSHHGP AKDMPPNNTT GHGRGENYAT ESLPVVQVRN SQHDQPLEHV SQLPPDDMPA SPDYESQRVK MRELAVQRAK QLQAEEEERT KRQKAKALAK
0801: LEELNKRSSV HQKDSSDPPP ENDDVRNKQK AGVDGTTEPA SSTAESHDVT VLDNVSILQP PNEPKDTAVP AQPMSTLLHT EGTGKDPSGH NTSTSGMNTQ
0901: SNMTEHIAHK SISLSHDVSV PKPRQGNRKR HAVSEDKILG EKSSVAVNTE NVKKAVEVSL DTSTAVVTSH DDPPAHSKKS ARNSRNKKKV DDAPATSKYP
1001: PMVLGQQNTP GISSEPKIKT AGVIISSSIL PAENTVLTVG SITVGGISFG SFNQERLKLP EEAQSTANSR PKPQQAKGSK KIQHAIRPVE KPHGNESVVW
1101: APVKPSGWNE PSEEANVAVA ARPKPIGKGT TDGENVTRTK RAEMERYVPK PLSKELQQQN LEQNLPVEKS SVENKSNDNE KLTAAKEPKK WEDRKTSKGH
1201: GKSHSSWRRR NTDDSSSVVP IPSERADSYQ ESHEVQRPSD KHPQLEPDKQ ADYAAGNSLA PAEAVELPAS AAKEHAAANR QRRQHVKGPK NEASNYSNEN
1301: RDGRKDVNHM STRGMDANSS EHRNMSKPEV KSSAAHSRAH WKPKSSHSQN NSQGNNTTEG QVDSATLQDS SNRNSNQGKG DMTNVDENQK GESHENAEQQ
1401: QLNHATRRQG QHNGRYHRGS SAHRGRGYDA GQPSHGANAE RRKGSTHLEY QPVGSNKPSD FQQNPSADGQ SAGPPAPGPV YRERGHNRGH RPPGGHFVKR
1501: NPAPAPAPAP APNSYREE
0001: MTSSTTGDRS RWGTTRRSGM TILGKVAVPK PINLPSQRLE NQGLDPNVEI VPKGTLSWGS KSSLNAWGTS SLSPRTESGP GSPSHLSNRP SSGGSVTRPS
0101: TADSNKAHDS SSSVAWDSNS RPSSASGVFP SNQPSVALQR PHSADTRPGS SQLSRFAEPV SETSATWGQH VAPEKLGVAP SKNDGFSLTS GDFPSLGAEK
0201: DTSEKSTRPQ GDTLDMALRN YKFADAGPHA RPPSSSGRSV EGQGVDCTEE ANDRIGDANS WRRENQPYSE DAPRHCREEG QLDSRGSQSY PNANFPPRYD
0301: AWRGPPVNNH QGGGWYGGNH PYGAPMGPGG FHMDPFPFYP TQVPPAPGHG AGPRGNHANN ERMFRPPMLD SYVHPRMQTR PGFYVGPAPH EGYYGPPMGY
0401: GSPSNRDLPF AGRPTGPHAY NNHSGQGGYD TPGSSVSLER NESSHSQETQ RPYKVLLKHQ DGRFGEDNAK REEFLGNRLP NAEKIAQQMQ TSRNERREIR
0501: NDASGEVQPV KAELAAPGDP SLIQKIEGLN AKTRTNDGWQ NSSSVVNRDE QESQPRTLNS GNSANKVSAR NHRTGHASDS KNSSHYNQGD SATNKNAEPA
0601: AMGGTSIFRR PTQQTQGRAD PQTKRIVNSE GNDAWQKTTV MSGSSHTTLA TNTESFREVN VDDSLDTESI RRPGSGISAD PKDNQRSTMR ELARQRAQQR
0701: QKEEEERARD QRAKALAKLE ELNRRSQIYE EGSVKNMEAA SNASPADMPT DPGSHSSNAT NSVEPTGGSG KNTTQNTRTS TEYANNVGPS QQDNLPRDGG
0801: ASKQKRLGYK QKQNIIFEKK PTGSSVATAE VFDVVPSPEV VNEGVSSNNS DMPATSTVSA ESTFPKRKNN RNGKKKHKAE ETATMNTTRV AVGKETKSGD
0901: ESIETARARA AEIELGSVSV PSLDIKVSGD SSEQISSFTN EESQNRAKNN WKSQHVRRTQ RNSLVNKPAE KFSGNNAVIW APVHPQQKAD VSTGGGSQTT
1001: VPEFGTSSKS QHQGQTSSKS KRVEIERYVP KPIVKEMAEQ IVSKNLVTSA PDMSENVNQK ENRGGEGTGI LQPSGSTAGK SGSPSKSRHG NGRQGKHGRE
1101: HASWHQRGSG APTKALEDGQ FVTSNQPIRG TVNYHSSKQT EQIAAKDQTT CNKDGWNDGW YMTPETHYSA AEEMESSAVG KDQGMSMHGR QHASRSNKDG
1201: GSNYGDPKKG NKRDFNKAHT QHSGHGFSQP DLPAASKEGR VPGDHVWHTA NRTGKYGGRE STRDKPYGSQ EKNVVGYEHQ GFTTEQKTTS ADTQAQLQNR
1301: STNKEVQVEQ NPNSMFQKNT GQGRRFGRGQ ESQGGWGLPA QENMHHHHQR PPSNRDRQKQ NLHYEYKPVG SHTYDGERSR EQSKESSQTE GPRYREKGQG
1401: QQRQGGYQQQ RGTSGRNGGH GFTGDRN
0101: TADSNKAHDS SSSVAWDSNS RPSSASGVFP SNQPSVALQR PHSADTRPGS SQLSRFAEPV SETSATWGQH VAPEKLGVAP SKNDGFSLTS GDFPSLGAEK
0201: DTSEKSTRPQ GDTLDMALRN YKFADAGPHA RPPSSSGRSV EGQGVDCTEE ANDRIGDANS WRRENQPYSE DAPRHCREEG QLDSRGSQSY PNANFPPRYD
0301: AWRGPPVNNH QGGGWYGGNH PYGAPMGPGG FHMDPFPFYP TQVPPAPGHG AGPRGNHANN ERMFRPPMLD SYVHPRMQTR PGFYVGPAPH EGYYGPPMGY
0401: GSPSNRDLPF AGRPTGPHAY NNHSGQGGYD TPGSSVSLER NESSHSQETQ RPYKVLLKHQ DGRFGEDNAK REEFLGNRLP NAEKIAQQMQ TSRNERREIR
0501: NDASGEVQPV KAELAAPGDP SLIQKIEGLN AKTRTNDGWQ NSSSVVNRDE QESQPRTLNS GNSANKVSAR NHRTGHASDS KNSSHYNQGD SATNKNAEPA
0601: AMGGTSIFRR PTQQTQGRAD PQTKRIVNSE GNDAWQKTTV MSGSSHTTLA TNTESFREVN VDDSLDTESI RRPGSGISAD PKDNQRSTMR ELARQRAQQR
0701: QKEEEERARD QRAKALAKLE ELNRRSQIYE EGSVKNMEAA SNASPADMPT DPGSHSSNAT NSVEPTGGSG KNTTQNTRTS TEYANNVGPS QQDNLPRDGG
0801: ASKQKRLGYK QKQNIIFEKK PTGSSVATAE VFDVVPSPEV VNEGVSSNNS DMPATSTVSA ESTFPKRKNN RNGKKKHKAE ETATMNTTRV AVGKETKSGD
0901: ESIETARARA AEIELGSVSV PSLDIKVSGD SSEQISSFTN EESQNRAKNN WKSQHVRRTQ RNSLVNKPAE KFSGNNAVIW APVHPQQKAD VSTGGGSQTT
1001: VPEFGTSSKS QHQGQTSSKS KRVEIERYVP KPIVKEMAEQ IVSKNLVTSA PDMSENVNQK ENRGGEGTGI LQPSGSTAGK SGSPSKSRHG NGRQGKHGRE
1101: HASWHQRGSG APTKALEDGQ FVTSNQPIRG TVNYHSSKQT EQIAAKDQTT CNKDGWNDGW YMTPETHYSA AEEMESSAVG KDQGMSMHGR QHASRSNKDG
1201: GSNYGDPKKG NKRDFNKAHT QHSGHGFSQP DLPAASKEGR VPGDHVWHTA NRTGKYGGRE STRDKPYGSQ EKNVVGYEHQ GFTTEQKTTS ADTQAQLQNR
1301: STNKEVQVEQ NPNSMFQKNT GQGRRFGRGQ ESQGGWGLPA QENMHHHHQR PPSNRDRQKQ NLHYEYKPVG SHTYDGERSR EQSKESSQTE GPRYREKGQG
1401: QQRQGGYQQQ RGTSGRNGGH GFTGDRN
Arabidopsis Description
MOS1modifier of snc1 [Source:TAIR;Acc:AT4G24680]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.