Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G086930.4 | Barley | nucleus | 89.98 | 89.64 |
| TraesCS1B01G422400.1 | Wheat | nucleus | 84.12 | 84.28 |
| TraesCS1D01G402000.1 | Wheat | nucleus | 82.8 | 82.49 |
| Os05t0561600-01 | Rice | plastid | 65.6 | 66.99 |
| OQU78421 | Sorghum | plastid | 62.38 | 63.58 |
| Zm00001d038998_P001 | Maize | plastid | 56.14 | 56.68 |
| Zm00001d009555_P003 | Maize | endoplasmic reticulum, vacuole | 51.61 | 52.3 |
| TraesCS3A01G272000.1 | Wheat | plastid | 45.18 | 44.92 |
| KRH55962 | Soybean | nucleus | 13.42 | 34.8 |
| VIT_12s0028g03740.t01 | Wine grape | nucleus | 9.83 | 34.44 |
| GSMUA_Achr4P07980_001 | Banana | nucleus | 27.79 | 30.82 |
| GSMUA_Achr4P15050_001 | Banana | nucleus | 26.09 | 27.88 |
| CDY18985 | Canola | nucleus | 24.01 | 26.51 |
| Solyc10g008340.2.1 | Tomato | extracellular | 27.22 | 26.42 |
| PGSC0003DMT400034191 | Potato | nucleus | 27.03 | 26.09 |
| TraesCS3A01G292800.1 | Wheat | nucleus | 29.87 | 26.07 |
| CDX97433 | Canola | nucleus | 24.01 | 25.81 |
| AT4G28300.1 | Thale cress | nucleus | 24.2 | 25.81 |
| CDX89188 | Canola | nucleus | 22.87 | 25.74 |
| Solyc07g053990.2.1 | Tomato | nucleus | 24.2 | 25.7 |
| Bra026268.1-P | Field mustard | nucleus | 23.06 | 25.63 |
| CDY25250 | Canola | nucleus | 23.82 | 25.61 |
| KRH26948 | Soybean | nucleus | 25.71 | 25.56 |
| CDY14248 | Canola | nucleus | 23.63 | 25.46 |
| KRH25575 | Soybean | nucleus | 25.52 | 25.28 |
| Bra010376.1-P | Field mustard | nucleus | 23.44 | 25.25 |
| CDY67879 | Canola | nucleus | 22.5 | 24.9 |
| KRH22387 | Soybean | nucleus | 25.14 | 24.77 |
| CDY29896 | Canola | nucleus | 22.5 | 24.44 |
| Bra024211.1-P | Field mustard | nucleus | 22.5 | 24.44 |
| PGSC0003DMT400047245 | Potato | nucleus | 24.76 | 24.39 |
| VIT_12s0028g03730.t01 | Wine grape | nucleus | 14.74 | 22.29 |
| KRH55961 | Soybean | cytosol | 10.78 | 20.88 |
| TraesCS1A01G113700.1 | Wheat | nucleus | 16.82 | 15.51 |
| TraesCS3A01G092900.1 | Wheat | nucleus | 16.64 | 14.59 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G394400.1 | EnsemblPlantsGene:TraesCS1A01G394400 | InterPro:DUF1421 | ncoils:Coil | PANTHER:PTHR31805 | PANTHER:PTHR31805:SF4 |
| PFAM:PF07223 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr1A:-:560403292..560406539
Molecular Weight (calculated)
58683.7 Da
IEP (calculated)
6.574
GRAVY (calculated)
-0.648
Length
529 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPARPASV SGPFGLAPDL ARCSFDHTLR REDFQDNRLL RSLVSMREQD NHSKEIITEA IESCMNKQAE NLVNSLDVIS GRLSQLELYC YKLERSIGEL
101: RSDVMDYHSE ANLNFHSLDK NVKEVQKCVQ VLQDKQELAE TQNELAKLQI VYEDPAQKSE GTAPSVFMAR ENDGSFPGAK HELALVPLHQ VNQSPAMQFQ
201: SCNGLILQQL VPVSLSTQQD QQHLNQSTVY RAQNQCQPER RHAQTFQPAP QSMQPQAQNP QPQTVVEVPP MTSQAPEFYI QAQHHWQHQT VQDVHSQARQ
301: QQPQPQVAQQ QQYHNMQQVP AQMVQLQTSS PQAQSAPHVA LFYPPYGSQQ PACGNTEALS RGMVVQPAYS TISSSQRKHH EAAPVYVQSS AIAVPMAEHH
401: IQQQQTQQFH SPSNGSFAPQ QCKVGPYSVQ GSAQAYNTVY GSPPNSAATF VAVLPQQAQQ ASAPMMLHHL GPQSVQNHPA DMADKAARMG YLNDHAENMP
501: RRMVAAGQPV EYNTFHDGLS SVGNAAWSG
101: RSDVMDYHSE ANLNFHSLDK NVKEVQKCVQ VLQDKQELAE TQNELAKLQI VYEDPAQKSE GTAPSVFMAR ENDGSFPGAK HELALVPLHQ VNQSPAMQFQ
201: SCNGLILQQL VPVSLSTQQD QQHLNQSTVY RAQNQCQPER RHAQTFQPAP QSMQPQAQNP QPQTVVEVPP MTSQAPEFYI QAQHHWQHQT VQDVHSQARQ
301: QQPQPQVAQQ QQYHNMQQVP AQMVQLQTSS PQAQSAPHVA LFYPPYGSQQ PACGNTEALS RGMVVQPAYS TISSSQRKHH EAAPVYVQSS AIAVPMAEHH
401: IQQQQTQQFH SPSNGSFAPQ QCKVGPYSVQ GSAQAYNTVY GSPPNSAATF VAVLPQQAQQ ASAPMMLHHL GPQSVQNHPA DMADKAARMG YLNDHAENMP
501: RRMVAAGQPV EYNTFHDGLS SVGNAAWSG
001: MASGSSGRVN SGSKGFDFGS DDILCSYDDY TNQDSSNGPH SDPAIAASNS NKEFHKTRMA RSSVFPTSSY SPPEDSLSQD ITDTVERTMK MYADNMMRFL
101: EGLSSRLSQL ELYCYNLDKT IGEMRSELTH AHEDADVKLR SLDKHLQEVH RSVQILRDKQ ELADTQKELA KLQLVQKESS SSSHSQHGED RVATPVPEPK
201: KSENTSDAHN QQLALALPHQ IAPQPQVQPQ PQPQQHQYYM PPPPTQLQNT PAPVPVSTPP SQLQAPPAQS QFMPPPPAPS HPSSAQTQSF PQYQQNWPPQ
301: PQARPQSSGG YPTYSPAPPG NQPPVESLPS SMQMQSPYSG PPQQSMQAYG YGAAPPPQAP PQQTKMSYSP QTGDGYLPSG PPPPSGYANA MYEGGRMQYP
401: PPQPQQQQQQ AHYLQGPQGG GYSPQPHQAG GGNIGAPPVL RSKYGELIEK LVSMGFRGDH VMAVIQRMEE SGQPIDFNTL LDRLSGQSSG GPPRGW
101: EGLSSRLSQL ELYCYNLDKT IGEMRSELTH AHEDADVKLR SLDKHLQEVH RSVQILRDKQ ELADTQKELA KLQLVQKESS SSSHSQHGED RVATPVPEPK
201: KSENTSDAHN QQLALALPHQ IAPQPQVQPQ PQPQQHQYYM PPPPTQLQNT PAPVPVSTPP SQLQAPPAQS QFMPPPPAPS HPSSAQTQSF PQYQQNWPPQ
301: PQARPQSSGG YPTYSPAPPG NQPPVESLPS SMQMQSPYSG PPQQSMQAYG YGAAPPPQAP PQQTKMSYSP QTGDGYLPSG PPPPSGYANA MYEGGRMQYP
401: PPQPQQQQQQ AHYLQGPQGG GYSPQPHQAG GGNIGAPPVL RSKYGELIEK LVSMGFRGDH VMAVIQRMEE SGQPIDFNTL LDRLSGQSSG GPPRGW
Arabidopsis Description
Formin-like protein (DUF1421) [Source:UniProtKB/TrEMBL;Acc:Q8VZR8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.