Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g051780.2.1 | Tomato | cytosol | 22.27 | 45.0 |
| GSMUA_Achr6P34020_001 | Banana | cytosol | 37.11 | 42.86 |
| PGSC0003DMT400061199 | Potato | cytosol | 23.09 | 40.0 |
| TraesCS3B01G394800.1 | Wheat | nucleus | 47.84 | 35.75 |
| KRG97851 | Soybean | cytosol | 28.04 | 32.77 |
| VIT_13s0019g02230.t01 | Wine grape | cytosol | 29.69 | 31.79 |
| CDX93239 | Canola | cytosol | 32.58 | 31.29 |
| KRH31028 | Soybean | cytosol | 29.07 | 30.99 |
| Bra017054.1-P | Field mustard | cytosol | 31.96 | 30.69 |
| CDY07030 | Canola | cytosol | 31.96 | 30.69 |
| AT2G39740.1 | Thale cress | cytosol | 31.96 | 30.33 |
| TraesCS6B01G090200.1 | Wheat | cytosol | 10.72 | 23.53 |
| TraesCS7B01G180400.1 | Wheat | cytosol | 17.11 | 14.74 |
| TraesCS4B01G003200.1 | Wheat | nucleus | 16.49 | 14.11 |
| TraesCS1B01G149800.1 | Wheat | nucleus | 14.23 | 8.08 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G394900.1 | EnsemblPlantsGene:TraesCS3B01G394900 | Gene3D:1.10.1410.10 | Gene3D:3.30.460.10 | PANTHER:PTHR12271 | PANTHER:PTHR12271:SF94 |
| SEG:seg | SUPFAM:SSF81301 | SUPFAM:SSF81631 | TIGR:cd05402 | MapMan:16.10.2.6.1 | : |
Description
No Description!
Coordinates
chr3B:+:622279175..622283553
Molecular Weight (calculated)
54095.5 Da
IEP (calculated)
8.999
GRAVY (calculated)
-0.373
Length
485 amino acids
Sequence
(BLAST)
(BLAST)
001: MPCPIGFSMV ELVQNYDVLE KCTKDILSII KPTEADQNKR LHAIQEIVDS IYLVGRLGDA AVKPFGSFLS KLYAKSGDLD VSVELPNVLG FPTSKEKKQS
101: LLGELMRALE VRGVSRDVNF IPTARVPVLQ YVSNHFGVSC DISIDNYPGG LKSKVLYWIN TLDGRFGDMV LLVKEWAKAQ NINDPKDGTL NSYSLCLLVL
201: FHFQTCKPAI LPPMNEFLDV NISAESGPYN EKNLDEMCAE SIAKFRRRDI GQRNQSSLSH LLATFFEKFC RLGVHSSDHV ISTYMGRLQR KQGGLYWMTK
301: SCYLFVEDPF QRLDNAARTV DVLGLHDIAT ALKNAKNIVS SDGPVDRNEF LSLLCTPEVG SKLGARATAG RYATPATTLQ EDRFRGFLER LAANPFDNQH
401: RLRAQGSTGS RSIHSPQPQG YNSGRQAAAR RQSQQRRGEY TSDRQASGHA LNAMFDEILG RRLHNGSAPN SRSQAFSSRS PGQYW
101: LLGELMRALE VRGVSRDVNF IPTARVPVLQ YVSNHFGVSC DISIDNYPGG LKSKVLYWIN TLDGRFGDMV LLVKEWAKAQ NINDPKDGTL NSYSLCLLVL
201: FHFQTCKPAI LPPMNEFLDV NISAESGPYN EKNLDEMCAE SIAKFRRRDI GQRNQSSLSH LLATFFEKFC RLGVHSSDHV ISTYMGRLQR KQGGLYWMTK
301: SCYLFVEDPF QRLDNAARTV DVLGLHDIAT ALKNAKNIVS SDGPVDRNEF LSLLCTPEVG SKLGARATAG RYATPATTLQ EDRFRGFLER LAANPFDNQH
401: RLRAQGSTGS RSIHSPQPQG YNSGRQAAAR RQSQQRRGEY TSDRQASGHA LNAMFDEILG RRLHNGSAPN SRSQAFSSRS PGQYW
001: MSRNPFLDPT LQEILQVIKP TRADRDTRIT VIDQLRDVLQ SVECLRGATV QPFGSFVSNL FTRWGDLDIS VDLFSGSSIL FTGKKQKQTL LGHLLRALRA
101: SGLWYKLQFV IHARVPILKV VSGHQRISCD ISIDNLDGLL KSRFLFWISE IDGRFRDLVL LVKEWAKAHN INDSKTGTFN SYSLSLLVIF HFQTCVPAIL
201: PPLRVIYPKS AVDDLTGVRK TAEESIAQVT AANIARFKSE RAKSVNRSSL SELLVSFFAK FSDINVKAQE FGVCPFTGRW ETISSNTTWL PKTYSLFVED
301: PFEQPVNAAR SVSRRNLDRI AQVFQITSRR LVSECNRNSI IGILTGQHIQ ESLYRTISLP SQHHANGMHN VRNLHGQARP QNQQMQQNWS QSYNTPNPPH
401: WPPLTQSRPQ QNWTQNNPRN LQGQPPVQGQ TWPVITQTQT QQKSPYKSGN RPLKNTSAGS SQNQGHIGKP SGHMNGVNSA RPAYTNGVNS ARPPSKIPSQ
501: GGQIWRPRHE Q
101: SGLWYKLQFV IHARVPILKV VSGHQRISCD ISIDNLDGLL KSRFLFWISE IDGRFRDLVL LVKEWAKAHN INDSKTGTFN SYSLSLLVIF HFQTCVPAIL
201: PPLRVIYPKS AVDDLTGVRK TAEESIAQVT AANIARFKSE RAKSVNRSSL SELLVSFFAK FSDINVKAQE FGVCPFTGRW ETISSNTTWL PKTYSLFVED
301: PFEQPVNAAR SVSRRNLDRI AQVFQITSRR LVSECNRNSI IGILTGQHIQ ESLYRTISLP SQHHANGMHN VRNLHGQARP QNQQMQQNWS QSYNTPNPPH
401: WPPLTQSRPQ QNWTQNNPRN LQGQPPVQGQ TWPVITQTQT QQKSPYKSGN RPLKNTSAGS SQNQGHIGKP SGHMNGVNSA RPAYTNGVNS ARPPSKIPSQ
501: GGQIWRPRHE Q
Arabidopsis Description
HESO1Protein HESO1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XET5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.