Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G311100.1 | Wheat | nucleus | 83.95 | 85.61 |
| TraesCS4D01G002900.1 | Wheat | nucleus, peroxisome, plastid | 84.48 | 85.38 |
| HORVU4Hr1G000070.38 | Barley | cytosol | 75.66 | 74.09 |
| Os09t0570600-01 | Rice | cytosol | 33.33 | 60.97 |
| OQU89042 | Sorghum | cytosol | 53.44 | 60.84 |
| Zm00001d019808_P003 | Maize | cytosol | 26.81 | 59.14 |
| TraesCS7B01G180400.1 | Wheat | cytosol | 45.33 | 45.65 |
| KRH53978 | Soybean | cytosol | 27.34 | 41.22 |
| CDX99148 | Canola | cytosol | 27.87 | 34.73 |
| Bra038277.1-P | Field mustard | cytosol | 27.69 | 34.58 |
| CDX86037 | Canola | cytosol | 27.34 | 33.19 |
| VIT_07s0031g02870.t01 | Wine grape | cytosol | 31.57 | 32.25 |
| Solyc11g044900.1.1 | Tomato | cytosol | 31.22 | 32.07 |
| PGSC0003DMT400076240 | Potato | nucleus | 33.16 | 30.57 |
| AT3G45760.1 | Thale cress | nucleus | 23.63 | 28.27 |
| Solyc09g091860.2.1 | Tomato | nucleus | 33.33 | 28.21 |
| PGSC0003DMT400059048 | Potato | plastid | 16.58 | 25.27 |
| AT3G45750.1 | Thale cress | cytosol | 29.81 | 24.78 |
| TraesCS6B01G090200.1 | Wheat | cytosol | 8.82 | 22.62 |
| TraesCS3B01G394900.1 | Wheat | cytosol | 14.11 | 16.49 |
| TraesCS3B01G394800.1 | Wheat | nucleus | 15.52 | 13.56 |
| TraesCS1B01G149800.1 | Wheat | nucleus | 12.87 | 8.55 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G003200.1 | EnsemblPlantsGene:TraesCS4B01G003200 | Gene3D:1.10.1410.10 | Gene3D:3.30.460.10 | PANTHER:PTHR12271 | PANTHER:PTHR12271:SF62 |
| SEG:seg | SUPFAM:SSF81301 | SUPFAM:SSF81631 | TIGR:cd05402 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr4B:+:1786186..1789869
Molecular Weight (calculated)
62110.4 Da
IEP (calculated)
9.706
GRAVY (calculated)
-0.300
Length
567 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTPAAAPPP PPPFSDASDA TSYSDSGSGS GSGGSGDSEE EASSRVWDSQ DLRAQAERNE EQLLAAMSVD PARLPALNDV LLEVYAVLRP KPADYEQRNA
101: LVDVFSKMAT RIFGNDNGFP VVQAFGSFTM DLFTPKSDLD LSVNFSAEIE DQCPRKKKMK VVRKFAKVLY SLQRDGIYCG VLPVVSAKVP IVNVIDRGTG
201: IECDITVENK DGMTRSMIIK LISSLDERFQ ILSYLVKTWA NIHGVNSPTA QTMSSMSIIS LVAFHLQTRH PPILPAFSAL LKDGSDFASV EKNISLFKGF
301: GSTNKESVAE LFVTLMNKLL SVESLWEHGL CASNFEASWI SKTWKKGVGN LSVEDFLDRS QNFARAVGKT QMQKICTCLV VCASNLTDFM KGHIDASKLK
401: TRLFGRLSPD DLVSRPRLRR GKRDLSPEGR RGIQQERTKR AARHEEPAHQ ANATPSTARV ATVMRPVRHC RFLGIQSSGG AQFACKPWWP FRIVPSGYGY
501: GLSVRLPLRA PHPGPGILGR APGDLIRSNS GILLPKQGPL LPTPLRERSA GTRRTGSGRD EQLHPAQ
101: LVDVFSKMAT RIFGNDNGFP VVQAFGSFTM DLFTPKSDLD LSVNFSAEIE DQCPRKKKMK VVRKFAKVLY SLQRDGIYCG VLPVVSAKVP IVNVIDRGTG
201: IECDITVENK DGMTRSMIIK LISSLDERFQ ILSYLVKTWA NIHGVNSPTA QTMSSMSIIS LVAFHLQTRH PPILPAFSAL LKDGSDFASV EKNISLFKGF
301: GSTNKESVAE LFVTLMNKLL SVESLWEHGL CASNFEASWI SKTWKKGVGN LSVEDFLDRS QNFARAVGKT QMQKICTCLV VCASNLTDFM KGHIDASKLK
401: TRLFGRLSPD DLVSRPRLRR GKRDLSPEGR RGIQQERTKR AARHEEPAHQ ANATPSTARV ATVMRPVRHC RFLGIQSSGG AQFACKPWWP FRIVPSGYGY
501: GLSVRLPLRA PHPGPGILGR APGDLIRSNS GILLPKQGPL LPTPLRERSA GTRRTGSGRD EQLHPAQ
001: MGSRGNVAED KNVSSKVIRK KVNNTVSIAL KRYKIDSYIL LDLDKVLNDV YCSFRPVSAD YNTRKELVKN LNTMALDIYG KSEESSPVLE AYGSFVMDMY
101: SSQSDLDVSI NFGNGTSEIP REKKLEILKR FAKKLRSLQG EGQVKNVESI FSAKVPIVKF SDQGTGVECD LSVENKDGIL NSQIVRIISQ IDGRFQKLCL
201: LVKHWAKAHE VNSALHRTLN SVSITLLVAL HLQTQNPPIL PPFSMLLKDG MDPPNVEKRA QKFLNWGQRN QESLGRLFAT FFIKLQSVEF LWRQGLCVSV
301: LNGLWISKKW KKVGVGSISV EDFTNISQNV ARRVNGAGAK KIYSSINRTV EDIFEFLNDK VAGTDLRHRL FGKGSVVQIP PVAPLNGKTA GIHKVSGQQA
401: VVQPSPPVPR LNGKIAGTHR KQKVFAQQAV VEPRPPVLPL NGNIAGTHFR HESFRQQAVL QPLPPLRPVN GSIGGTHFRD RLFDQQVLVE PRPLLPPFSG
501: SIAETHFRHR SFPQEAVLDP RPSVQSRNVY SQQLHNNYRN GFSGPPEEHH TKRLCLGNRY RALEETGNWR EEERYEDPRG KRNRYVGNFN GLEEFREIPR
601: FGIHSNPLDD PYRQVPLNAG TNGHLVHHRH DGRYNGEEPM HVGQWQDYTR RVGSPPLQQT PPPYDRVSYE DFRPHLGRSF YH
101: SSQSDLDVSI NFGNGTSEIP REKKLEILKR FAKKLRSLQG EGQVKNVESI FSAKVPIVKF SDQGTGVECD LSVENKDGIL NSQIVRIISQ IDGRFQKLCL
201: LVKHWAKAHE VNSALHRTLN SVSITLLVAL HLQTQNPPIL PPFSMLLKDG MDPPNVEKRA QKFLNWGQRN QESLGRLFAT FFIKLQSVEF LWRQGLCVSV
301: LNGLWISKKW KKVGVGSISV EDFTNISQNV ARRVNGAGAK KIYSSINRTV EDIFEFLNDK VAGTDLRHRL FGKGSVVQIP PVAPLNGKTA GIHKVSGQQA
401: VVQPSPPVPR LNGKIAGTHR KQKVFAQQAV VEPRPPVLPL NGNIAGTHFR HESFRQQAVL QPLPPLRPVN GSIGGTHFRD RLFDQQVLVE PRPLLPPFSG
501: SIAETHFRHR SFPQEAVLDP RPSVQSRNVY SQQLHNNYRN GFSGPPEEHH TKRLCLGNRY RALEETGNWR EEERYEDPRG KRNRYVGNFN GLEEFREIPR
601: FGIHSNPLDD PYRQVPLNAG TNGHLVHHRH DGRYNGEEPM HVGQWQDYTR RVGSPPLQQT PPPYDRVSYE DFRPHLGRSF YH
Arabidopsis Description
Nucleotidyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q7Y216]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.