Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- nucleus 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G311100.1 | Wheat | nucleus | 86.45 | 87.23 |
| TraesCS4B01G003200.1 | Wheat | nucleus | 85.38 | 84.48 |
| HORVU4Hr1G000070.38 | Barley | cytosol | 78.07 | 75.65 |
| Os09t0570600-01 | Rice | cytosol | 34.4 | 62.26 |
| Zm00001d019808_P003 | Maize | cytosol | 27.63 | 60.31 |
| OQU89042 | Sorghum | cytosol | 53.3 | 60.04 |
| TraesCS7D01G279400.1 | Wheat | cytosol | 46.17 | 46.0 |
| KRH53978 | Soybean | cytosol | 28.16 | 42.02 |
| Bra038277.1-P | Field mustard | cytosol | 27.27 | 33.7 |
| CDX99148 | Canola | cytosol | 27.27 | 33.63 |
| VIT_07s0031g02870.t01 | Wine grape | cytosol | 32.09 | 32.43 |
| CDX86037 | Canola | cytosol | 26.74 | 32.12 |
| Solyc11g044900.1.1 | Tomato | cytosol | 31.37 | 31.88 |
| PGSC0003DMT400076240 | Potato | nucleus | 33.87 | 30.89 |
| AT3G45760.1 | Thale cress | nucleus | 23.35 | 27.64 |
| Solyc09g091860.2.1 | Tomato | nucleus | 32.98 | 27.61 |
| PGSC0003DMT400059048 | Potato | plastid | 16.04 | 24.19 |
| AT3G45750.1 | Thale cress | cytosol | 28.52 | 23.46 |
| TraesCS3D01G356000.1 | Wheat | nucleus | 15.69 | 13.37 |
| TraesCS1D01G133800.1 | Wheat | nucleus, plastid | 13.55 | 9.18 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G002900.1 | EnsemblPlantsGene:TraesCS4D01G002900 | Gene3D:1.10.1410.10 | Gene3D:3.30.460.10 | PANTHER:PTHR12271 | PANTHER:PTHR12271:SF62 |
| SEG:seg | SUPFAM:SSF81301 | SUPFAM:SSF81631 | TIGR:cd05402 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr4D:-:1365103..1368569
Molecular Weight (calculated)
61731.0 Da
IEP (calculated)
9.379
GRAVY (calculated)
-0.317
Length
561 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWRAMATPA AASPPPPPPF SDATSYSDTD SGGSGDSEEE ASSMVWDSQD LRGRAEHNEE QLLAAMSVDP GRFPALNDLL LEVYAVLRPK PTDYEQRNAL
101: VDVFSKMATR IFGNDNGFPV VQAFGSFTMD LFTPKSDLDL SVNFSAEIED QCPRKKKMKV VRKFAKVLYS LQRDGIYCGV LPVVSAKVPI VNVIDRGTGI
201: ECDVTVENKD GMTRSMIIKL ISSLDERFQI LSYLVKTWAK IHDVNSPTAQ TMSSMSIISL VAFHLQTRHP PILPAFSALL KDGSDFASVE KNISLFKGFG
301: SANKESVAEL FVTLMSKLLS VESLWEHGLC ASNFEASWIS KTWKKGVGNL SVEDFLDRSQ NFARAVGKTQ MQKICTCLVV CASNLTDFMK GHMDVSNLKT
401: RLFGRLNPDD LVSRPRPRRG KRNLSPEGRR GIQQERTKRA ARHEAPAHQV NATPSTARVA TVRHCRFPGI QSSGAQFACK PWWPFRIVPS GFGYGISVRL
501: PPRAPHPGPG ILGRAPGDLI TSNSGIQLPN QGSLLPRPLR ERSDGMRRTG SGGDEQLHPA P
101: VDVFSKMATR IFGNDNGFPV VQAFGSFTMD LFTPKSDLDL SVNFSAEIED QCPRKKKMKV VRKFAKVLYS LQRDGIYCGV LPVVSAKVPI VNVIDRGTGI
201: ECDVTVENKD GMTRSMIIKL ISSLDERFQI LSYLVKTWAK IHDVNSPTAQ TMSSMSIISL VAFHLQTRHP PILPAFSALL KDGSDFASVE KNISLFKGFG
301: SANKESVAEL FVTLMSKLLS VESLWEHGLC ASNFEASWIS KTWKKGVGNL SVEDFLDRSQ NFARAVGKTQ MQKICTCLVV CASNLTDFMK GHMDVSNLKT
401: RLFGRLNPDD LVSRPRPRRG KRNLSPEGRR GIQQERTKRA ARHEAPAHQV NATPSTARVA TVRHCRFPGI QSSGAQFACK PWWPFRIVPS GFGYGISVRL
501: PPRAPHPGPG ILGRAPGDLI TSNSGIQLPN QGSLLPRPLR ERSDGMRRTG SGGDEQLHPA P
001: MSEESSPVLE AYGSFVMDMY SSQSDLDVSI NFGNGTSEIP REKKLEILKR FAKKLRSLQG EGQVKNVESI FSAKVPIVKF SDQGTGVECD LSVENKDGIL
101: NSQIVRIISQ IDGRFQKLCL LVKHWAKAHE VNSALHRTLN SVSITLLVAL HLQTQNPPIL PPFSMLLKDG MDPPNVEKRA QKFLNWGQRN QESLGRLFAT
201: FFIKLQSVEF LWRQGLCVSV LNGLWISKKW KKVGVGSISV EDFTNISQNV ARRVNGAGAK KIYSSINRTV EDIFEFLNDK VAGTDLRHRL FGKGSVVQIP
301: PVAPLNGKTA GIHKVSGQQA VVQPSPPVPR LNGKIAGTHR KQKVFAQQAV VEPRPPVLPL NGNIAGTHFR HESFRQQAVL QPLPPLRPVN GSIGGTHFRD
401: RLFDQQVLVE PRPLLPPFSG SIAETHFRHR SFPQEAVLDP RPSVQSRNVY SQQLHNNYRN GFSGPPEEHH TKRLCLGNRY RALEETGNWR EEERYEDPRG
501: KRNRYVGNFN GLEEFREIPR FGIHSNPLDD PYRQVPLNAG TNGHLVHHRH DGRYNGEEPM HVGQWQDYTR RVGSPPLQQT PPPYDRVSYE DFRPHLGRSF
601: YH
101: NSQIVRIISQ IDGRFQKLCL LVKHWAKAHE VNSALHRTLN SVSITLLVAL HLQTQNPPIL PPFSMLLKDG MDPPNVEKRA QKFLNWGQRN QESLGRLFAT
201: FFIKLQSVEF LWRQGLCVSV LNGLWISKKW KKVGVGSISV EDFTNISQNV ARRVNGAGAK KIYSSINRTV EDIFEFLNDK VAGTDLRHRL FGKGSVVQIP
301: PVAPLNGKTA GIHKVSGQQA VVQPSPPVPR LNGKIAGTHR KQKVFAQQAV VEPRPPVLPL NGNIAGTHFR HESFRQQAVL QPLPPLRPVN GSIGGTHFRD
401: RLFDQQVLVE PRPLLPPFSG SIAETHFRHR SFPQEAVLDP RPSVQSRNVY SQQLHNNYRN GFSGPPEEHH TKRLCLGNRY RALEETGNWR EEERYEDPRG
501: KRNRYVGNFN GLEEFREIPR FGIHSNPLDD PYRQVPLNAG TNGHLVHHRH DGRYNGEEPM HVGQWQDYTR RVGSPPLQQT PPPYDRVSYE DFRPHLGRSF
601: YH
Arabidopsis Description
Nucleotidyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q7Y216]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.