Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400059048 | Potato | plastid | 58.33 | 86.56 |
| KRH53978 | Soybean | cytosol | 29.89 | 43.88 |
| Zm00001d019808_P003 | Maize | cytosol | 19.02 | 40.86 |
| Os09t0570600-01 | Rice | cytosol | 22.28 | 39.68 |
| VIT_07s0031g02870.t01 | Wine grape | cytosol | 38.41 | 38.2 |
| Solyc09g091860.2.1 | Tomato | nucleus | 43.48 | 35.82 |
| Bra038277.1-P | Field mustard | cytosol | 28.44 | 34.58 |
| OQU89042 | Sorghum | cytosol | 31.16 | 34.54 |
| CDX99148 | Canola | cytosol | 28.26 | 34.29 |
| Os08t0559900-01 | Rice | nucleus | 34.96 | 33.22 |
| TraesCS7D01G279400.1 | Wheat | cytosol | 33.88 | 33.21 |
| TraesCS7B01G180400.1 | Wheat | cytosol | 33.88 | 33.21 |
| TraesCS4A01G311100.1 | Wheat | nucleus | 33.15 | 32.91 |
| TraesCS7A01G280800.1 | Wheat | cytosol | 33.15 | 32.56 |
| CDX86037 | Canola | cytosol | 27.17 | 32.12 |
| TraesCS4D01G002900.1 | Wheat | nucleus, peroxisome, plastid | 31.88 | 31.37 |
| TraesCS4B01G003200.1 | Wheat | nucleus | 32.07 | 31.22 |
| HORVU4Hr1G000070.38 | Barley | cytosol | 32.61 | 31.09 |
| Solyc06g051780.2.1 | Tomato | cytosol | 12.5 | 28.75 |
| AT3G45760.1 | Thale cress | nucleus | 24.46 | 28.48 |
| OQU80706 | Sorghum | nucleus | 32.61 | 26.09 |
| Zm00001d049928_P005 | Maize | nucleus | 32.25 | 25.8 |
| AT3G45750.1 | Thale cress | cytosol | 28.8 | 23.31 |
| Zm00001d019809_P001 | Maize | mitochondrion | 6.88 | 11.59 |
| Solyc01g094000.2.1 | Tomato | nucleus | 13.77 | 9.81 |
Protein Annotations
| EnsemblPlants:Solyc11g044900.1.1 | EnsemblPlantsGene:Solyc11g044900.1 | Gene3D:1.10.1410.10 | Gene3D:3.30.460.10 | ncoils:Coil | PANTHER:PTHR12271 |
| PANTHER:PTHR12271:SF38 | SUPFAM:SSF81301 | SUPFAM:SSF81631 | UniParc:UPI000276A5E2 | UniProt:K4D8F5 | MapMan:35.1 |
Description
No Description!
Coordinates
chr11:-:32058360..32071371
Molecular Weight (calculated)
62000.5 Da
IEP (calculated)
9.961
GRAVY (calculated)
-0.341
Length
552 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLSVEVLCK EAQQCEQKQR KKYTATLEQL SAFEVLLDEV YVDCLPKPSD YDARRDLLRI FNEIAKEVYG YSADAPVVEV FGSYSMDLFC VKSDLDLSVN
101: FTNRKVNITR EKKIQTLRKF AKKFYQLQRN GFVRGVNPVT TARVPVLKVV DRGTDIECDI SVENQDGISK SKTIYMIGSI DERFRKLSFL MKAWAKAQNI
201: NSAKDQTLNS LSIILLVAFH LQTRNPPILP PFSALFKDGN DSVAVESSVC KFSNYGISNK ESVAELFVSL LNKLLSVEKL WSEGLCASTF EGSWISRTRG
301: DRVGRINVED FADRSQNVAR AVGAVEVKQI YRCIQLSVQH IFDFLNKKIG GNSLREFLFG QVVASKLAGA GTAKSGKKEV QSVALSKGNK KTVHVDSILT
401: KSRTSVKSPR GMAQGKHKLL GPTDSSLTKR SRTDDWLGGT FSELSRRQPG EQPMPYYLTN SWGPMSMISR EAMYNRPQPV PFEPTYGRMR FAEHSGDPNL
501: IAPAVPHMFP SRHPIGSQIS YEPLRHPVGY LNSVFDSRQS SAYILPPHSR RF
101: FTNRKVNITR EKKIQTLRKF AKKFYQLQRN GFVRGVNPVT TARVPVLKVV DRGTDIECDI SVENQDGISK SKTIYMIGSI DERFRKLSFL MKAWAKAQNI
201: NSAKDQTLNS LSIILLVAFH LQTRNPPILP PFSALFKDGN DSVAVESSVC KFSNYGISNK ESVAELFVSL LNKLLSVEKL WSEGLCASTF EGSWISRTRG
301: DRVGRINVED FADRSQNVAR AVGAVEVKQI YRCIQLSVQH IFDFLNKKIG GNSLREFLFG QVVASKLAGA GTAKSGKKEV QSVALSKGNK KTVHVDSILT
401: KSRTSVKSPR GMAQGKHKLL GPTDSSLTKR SRTDDWLGGT FSELSRRQPG EQPMPYYLTN SWGPMSMISR EAMYNRPQPV PFEPTYGRMR FAEHSGDPNL
501: IAPAVPHMFP SRHPIGSQIS YEPLRHPVGY LNSVFDSRQS SAYILPPHSR RF
001: MGSRGNVAED KNVSSKVIRK KVNNTVSIAL KRYKIDSYIL LDLDKVLNDV YCSFRPVSAD YNTRKELVKN LNTMALDIYG KSEESSPVLE AYGSFVMDMY
101: SSQSDLDVSI NFGNGTSEIP REKKLEILKR FAKKLRSLQG EGQVKNVESI FSAKVPIVKF SDQGTGVECD LSVENKDGIL NSQIVRIISQ IDGRFQKLCL
201: LVKHWAKAHE VNSALHRTLN SVSITLLVAL HLQTQNPPIL PPFSMLLKDG MDPPNVEKRA QKFLNWGQRN QESLGRLFAT FFIKLQSVEF LWRQGLCVSV
301: LNGLWISKKW KKVGVGSISV EDFTNISQNV ARRVNGAGAK KIYSSINRTV EDIFEFLNDK VAGTDLRHRL FGKGSVVQIP PVAPLNGKTA GIHKVSGQQA
401: VVQPSPPVPR LNGKIAGTHR KQKVFAQQAV VEPRPPVLPL NGNIAGTHFR HESFRQQAVL QPLPPLRPVN GSIGGTHFRD RLFDQQVLVE PRPLLPPFSG
501: SIAETHFRHR SFPQEAVLDP RPSVQSRNVY SQQLHNNYRN GFSGPPEEHH TKRLCLGNRY RALEETGNWR EEERYEDPRG KRNRYVGNFN GLEEFREIPR
601: FGIHSNPLDD PYRQVPLNAG TNGHLVHHRH DGRYNGEEPM HVGQWQDYTR RVGSPPLQQT PPPYDRVSYE DFRPHLGRSF YH
101: SSQSDLDVSI NFGNGTSEIP REKKLEILKR FAKKLRSLQG EGQVKNVESI FSAKVPIVKF SDQGTGVECD LSVENKDGIL NSQIVRIISQ IDGRFQKLCL
201: LVKHWAKAHE VNSALHRTLN SVSITLLVAL HLQTQNPPIL PPFSMLLKDG MDPPNVEKRA QKFLNWGQRN QESLGRLFAT FFIKLQSVEF LWRQGLCVSV
301: LNGLWISKKW KKVGVGSISV EDFTNISQNV ARRVNGAGAK KIYSSINRTV EDIFEFLNDK VAGTDLRHRL FGKGSVVQIP PVAPLNGKTA GIHKVSGQQA
401: VVQPSPPVPR LNGKIAGTHR KQKVFAQQAV VEPRPPVLPL NGNIAGTHFR HESFRQQAVL QPLPPLRPVN GSIGGTHFRD RLFDQQVLVE PRPLLPPFSG
501: SIAETHFRHR SFPQEAVLDP RPSVQSRNVY SQQLHNNYRN GFSGPPEEHH TKRLCLGNRY RALEETGNWR EEERYEDPRG KRNRYVGNFN GLEEFREIPR
601: FGIHSNPLDD PYRQVPLNAG TNGHLVHHRH DGRYNGEEPM HVGQWQDYTR RVGSPPLQQT PPPYDRVSYE DFRPHLGRSF YH
Arabidopsis Description
Nucleotidyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q7Y216]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.