Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99148 | Canola | cytosol | 51.48 | 53.63 |
| Bra038277.1-P | Field mustard | cytosol | 51.27 | 53.52 |
| CDX86037 | Canola | cytosol | 50.63 | 51.39 |
| AT3G45750.1 | Thale cress | cytosol | 58.65 | 40.76 |
| KRH53978 | Soybean | cytosol | 26.58 | 33.51 |
| Zm00001d019808_P003 | Maize | cytosol | 17.93 | 33.07 |
| Os09t0570600-01 | Rice | cytosol | 18.99 | 29.03 |
| OQU89042 | Sorghum | cytosol | 26.79 | 25.5 |
| VIT_07s0031g02870.t01 | Wine grape | cytosol | 29.32 | 25.05 |
| Solyc11g044900.1.1 | Tomato | cytosol | 28.48 | 24.46 |
| TraesCS4A01G311100.1 | Wheat | nucleus | 27.85 | 23.74 |
| TraesCS4B01G003200.1 | Wheat | nucleus | 28.27 | 23.63 |
| TraesCS4D01G002900.1 | Wheat | nucleus, peroxisome, plastid | 27.64 | 23.35 |
| HORVU4Hr1G000070.38 | Barley | cytosol | 27.64 | 22.63 |
| TraesCS7A01G280800.1 | Wheat | cytosol | 26.79 | 22.6 |
| TraesCS7B01G180400.1 | Wheat | cytosol | 26.37 | 22.2 |
| TraesCS7D01G279400.1 | Wheat | cytosol | 26.37 | 22.2 |
| Os08t0559900-01 | Rice | nucleus | 27.0 | 22.03 |
| PGSC0003DMT400076240 | Potato | nucleus | 28.27 | 21.79 |
| Solyc09g091860.2.1 | Tomato | nucleus | 28.48 | 20.15 |
| OQU80706 | Sorghum | nucleus | 27.85 | 19.13 |
| Zm00001d049928_P005 | Maize | nucleus | 27.64 | 18.99 |
| PGSC0003DMT400059048 | Potato | plastid | 14.77 | 18.82 |
| AT2G39740.1 | Thale cress | cytosol | 16.67 | 15.46 |
| Zm00001d019809_P001 | Maize | mitochondrion | 6.96 | 10.06 |
| AT2G45620.1 | Thale cress | nucleus | 14.98 | 9.29 |
Protein Annotations
| Gene3D:1.10.1410.10 | Gene3D:3.30.460.10 | MapMan:35.1 | EntrezGene:823719 | ProteinID:AEE78068.1 | ArrayExpress:AT3G45760 |
| EnsemblPlantsGene:AT3G45760 | RefSeq:AT3G45760 | TAIR:AT3G45760 | RefSeq:AT3G45760-TAIR-G | EnsemblPlants:AT3G45760.1 | TAIR:AT3G45760.1 |
| Unigene:At.53771 | UniProt:F4J6R3 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0016740 |
| RefSeq:NP_190162.4 | PANTHER:PTHR12271 | PANTHER:PTHR12271:SF38 | SUPFAM:SSF81301 | SUPFAM:SSF81631 | UniParc:UPI0001A7B080 |
| SEG:seg | : | : | : | : | : |
Description
Nucleotidyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:F4J6R3]
Coordinates
chr3:-:16801996..16804759
Molecular Weight (calculated)
53416.0 Da
IEP (calculated)
9.655
GRAVY (calculated)
-0.456
Length
474 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFRKNQAGE KNVSSKGIQK KVKNTMSIAS KRYNIDSYIL LDLDKVLDDA YSSFRPVSAD YNTRKELVKN LNAMAIDIFG KSEESSPVLE AYGSFAMNTF
101: SSQKDLDVSI NFSSGTSEFY REKKLEILTR FATKLRSLEG QGFVRNVVPI LSARVPIVRF CDQGTGIECD LTVESKDGIL TSQIIRIISQ IDDRFQKLCL
201: LIKHWARAHG VNNASHNTLN SISITMLVAH HLQTQSPPIL PPFSTLFKDG IDPPIVEKRT QKFLNWGQRN QESLGRLFAT FFIKVEDFTD VARNFARVFS
301: DYGAEKIYSS INRTVDDILE FLNGKVAGEH LTQKLFSQQT VVEPIPPVSP QQPHKKRVCL EKGYRAVGGI SHGREETHET SRGKRKRSGG NWGCRFSGGE
401: EPMPVGLWNE YSRSLDMPTP PPHYDKLLYK KVPLKTVELM CGHCSGANRH HPHIGLTSQK PEPPLMTRGL HSQV
101: SSQKDLDVSI NFSSGTSEFY REKKLEILTR FATKLRSLEG QGFVRNVVPI LSARVPIVRF CDQGTGIECD LTVESKDGIL TSQIIRIISQ IDDRFQKLCL
201: LIKHWARAHG VNNASHNTLN SISITMLVAH HLQTQSPPIL PPFSTLFKDG IDPPIVEKRT QKFLNWGQRN QESLGRLFAT FFIKVEDFTD VARNFARVFS
301: DYGAEKIYSS INRTVDDILE FLNGKVAGEH LTQKLFSQQT VVEPIPPVSP QQPHKKRVCL EKGYRAVGGI SHGREETHET SRGKRKRSGG NWGCRFSGGE
401: EPMPVGLWNE YSRSLDMPTP PPHYDKLLYK KVPLKTVELM CGHCSGANRH HPHIGLTSQK PEPPLMTRGL HSQV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.