Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g091860.2.1 | Tomato | nucleus | 81.14 | 74.48 |
| KRH53978 | Soybean | cytosol | 27.15 | 44.41 |
| Zm00001d019808_P003 | Maize | cytosol | 17.4 | 41.63 |
| Os09t0570600-01 | Rice | cytosol | 20.49 | 40.65 |
| VIT_07s0031g02870.t01 | Wine grape | cytosol | 35.77 | 39.64 |
| OQU89042 | Sorghum | cytosol | 28.94 | 35.74 |
| Bra038277.1-P | Field mustard | cytosol | 25.85 | 35.02 |
| CDX99148 | Canola | cytosol | 25.85 | 34.95 |
| TraesCS4A01G311100.1 | Wheat | nucleus | 31.54 | 34.89 |
| PGSC0003DMT400059048 | Potato | plastid | 20.98 | 34.68 |
| HORVU4Hr1G000070.38 | Barley | cytosol | 32.03 | 34.02 |
| TraesCS4D01G002900.1 | Wheat | nucleus, peroxisome, plastid | 30.89 | 33.87 |
| CDX86037 | Canola | cytosol | 25.2 | 33.19 |
| TraesCS4B01G003200.1 | Wheat | nucleus | 30.57 | 33.16 |
| Os08t0559900-01 | Rice | nucleus | 31.06 | 32.87 |
| TraesCS7B01G180400.1 | Wheat | cytosol | 29.92 | 32.68 |
| TraesCS7D01G279400.1 | Wheat | cytosol | 29.76 | 32.5 |
| TraesCS7A01G280800.1 | Wheat | cytosol | 29.59 | 32.38 |
| AT3G45760.1 | Thale cress | nucleus | 21.79 | 28.27 |
| PGSC0003DMT400061199 | Potato | cytosol | 12.36 | 27.14 |
| OQU80706 | Sorghum | nucleus | 28.78 | 25.65 |
| AT3G45750.1 | Thale cress | cytosol | 27.64 | 24.93 |
| Zm00001d049928_P005 | Maize | nucleus | 27.8 | 24.78 |
| PGSC0003DMT400000387 | Potato | plastid | 12.2 | 10.58 |
| Zm00001d019809_P001 | Maize | mitochondrion | 5.53 | 10.37 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400076240 | EnsemblPlantsGene:PGSC0003DMG400029638 | Gene3D:1.10.1410.10 | Gene3D:3.30.460.10 | PANTHER:PTHR12271 | PANTHER:PTHR12271:SF38 |
| PGSC:PGSC0003DMG400029638 | SEG:seg | SUPFAM:SSF81301 | SUPFAM:SSF81631 | UniParc:UPI00029532B9 | UniProt:M1CWF8 |
| MapMan:35.1 | : | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400029638]
Coordinates
chr9:+:58775067..58782201
Molecular Weight (calculated)
68612.1 Da
IEP (calculated)
9.731
GRAVY (calculated)
-0.661
Length
615 amino acids
Sequence
(BLAST)
(BLAST)
001: MATVYRVKVI RKRAERHERK RMQNYKVQAE RLSAFEELLN EIYTVCRPKP RDYEVRRDLI SAFNEIAKDI YGCSGNVPVV EEFGSFVMDL FHSKSDLDLS
101: VNFDNCSVQF SHEKRIQTLR KFARKLYALQ RYGHVSGVHP ITAAKVPVLK VVDCGTKVEC DISVENRDGV SKSKIIHMIC SLDERFQKLS FLMKAWAKAQ
201: NINSSKDKTL NSLSVILLVA FHLQTRNPPI LPPFSAILED GSDPDSVAKS LKKFVNYGKG NKESVAELLV TLLIKLLSVE KLWAKGLCAS TYEASWLSKT
301: WDSKVCCISV EDFTDRSQNV ARAVGKGEVK RIYKCIQRTS EYISAFMDGL VEIPKLKHQL FGNAAPFQEV SETGNIKEDG NIITLPCRDI KNKEDQSKEG
401: QNGSQLAIPS EPIATKTKWS TEGWEGLTSV SGGKSKGKWS TEGWEGVRSA SWGQPMEDGG PADSPWSKGK WSTEGWEGIR SASWGQSKED GGPADSPWSK
501: GKWSTEGWDG IRSASWEQPK EDDGPPDSPW SKGKWSMKGW GKASSANWGQ SNGDSVPPDS ILTKRKRSEE TRGGTSSAQW LGKSDTKSWP KRKHNSKYAP
601: KAKWSKMQTG GRGGS
101: VNFDNCSVQF SHEKRIQTLR KFARKLYALQ RYGHVSGVHP ITAAKVPVLK VVDCGTKVEC DISVENRDGV SKSKIIHMIC SLDERFQKLS FLMKAWAKAQ
201: NINSSKDKTL NSLSVILLVA FHLQTRNPPI LPPFSAILED GSDPDSVAKS LKKFVNYGKG NKESVAELLV TLLIKLLSVE KLWAKGLCAS TYEASWLSKT
301: WDSKVCCISV EDFTDRSQNV ARAVGKGEVK RIYKCIQRTS EYISAFMDGL VEIPKLKHQL FGNAAPFQEV SETGNIKEDG NIITLPCRDI KNKEDQSKEG
401: QNGSQLAIPS EPIATKTKWS TEGWEGLTSV SGGKSKGKWS TEGWEGVRSA SWGQPMEDGG PADSPWSKGK WSTEGWEGIR SASWGQSKED GGPADSPWSK
501: GKWSTEGWDG IRSASWEQPK EDDGPPDSPW SKGKWSMKGW GKASSANWGQ SNGDSVPPDS ILTKRKRSEE TRGGTSSAQW LGKSDTKSWP KRKHNSKYAP
601: KAKWSKMQTG GRGGS
001: MGSRGNVAED KNVSSKVIRK KVNNTVSIAL KRYKIDSYIL LDLDKVLNDV YCSFRPVSAD YNTRKELVKN LNTMALDIYG KSEESSPVLE AYGSFVMDMY
101: SSQSDLDVSI NFGNGTSEIP REKKLEILKR FAKKLRSLQG EGQVKNVESI FSAKVPIVKF SDQGTGVECD LSVENKDGIL NSQIVRIISQ IDGRFQKLCL
201: LVKHWAKAHE VNSALHRTLN SVSITLLVAL HLQTQNPPIL PPFSMLLKDG MDPPNVEKRA QKFLNWGQRN QESLGRLFAT FFIKLQSVEF LWRQGLCVSV
301: LNGLWISKKW KKVGVGSISV EDFTNISQNV ARRVNGAGAK KIYSSINRTV EDIFEFLNDK VAGTDLRHRL FGKGSVVQIP PVAPLNGKTA GIHKVSGQQA
401: VVQPSPPVPR LNGKIAGTHR KQKVFAQQAV VEPRPPVLPL NGNIAGTHFR HESFRQQAVL QPLPPLRPVN GSIGGTHFRD RLFDQQVLVE PRPLLPPFSG
501: SIAETHFRHR SFPQEAVLDP RPSVQSRNVY SQQLHNNYRN GFSGPPEEHH TKRLCLGNRY RALEETGNWR EEERYEDPRG KRNRYVGNFN GLEEFREIPR
601: FGIHSNPLDD PYRQVPLNAG TNGHLVHHRH DGRYNGEEPM HVGQWQDYTR RVGSPPLQQT PPPYDRVSYE DFRPHLGRSF YH
101: SSQSDLDVSI NFGNGTSEIP REKKLEILKR FAKKLRSLQG EGQVKNVESI FSAKVPIVKF SDQGTGVECD LSVENKDGIL NSQIVRIISQ IDGRFQKLCL
201: LVKHWAKAHE VNSALHRTLN SVSITLLVAL HLQTQNPPIL PPFSMLLKDG MDPPNVEKRA QKFLNWGQRN QESLGRLFAT FFIKLQSVEF LWRQGLCVSV
301: LNGLWISKKW KKVGVGSISV EDFTNISQNV ARRVNGAGAK KIYSSINRTV EDIFEFLNDK VAGTDLRHRL FGKGSVVQIP PVAPLNGKTA GIHKVSGQQA
401: VVQPSPPVPR LNGKIAGTHR KQKVFAQQAV VEPRPPVLPL NGNIAGTHFR HESFRQQAVL QPLPPLRPVN GSIGGTHFRD RLFDQQVLVE PRPLLPPFSG
501: SIAETHFRHR SFPQEAVLDP RPSVQSRNVY SQQLHNNYRN GFSGPPEEHH TKRLCLGNRY RALEETGNWR EEERYEDPRG KRNRYVGNFN GLEEFREIPR
601: FGIHSNPLDD PYRQVPLNAG TNGHLVHHRH DGRYNGEEPM HVGQWQDYTR RVGSPPLQQT PPPYDRVSYE DFRPHLGRSF YH
Arabidopsis Description
Nucleotidyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q7Y216]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.