Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plasma membrane 1
- plastid 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G280800.1 | Wheat | cytosol | 61.79 | 63.88 |
| TraesCS7B01G180400.1 | Wheat | cytosol | 61.62 | 63.59 |
| TraesCS7D01G279400.1 | Wheat | cytosol | 61.45 | 63.41 |
| Os09t0570600-01 | Rice | cytosol | 29.78 | 55.81 |
| OQU80706 | Sorghum | nucleus | 59.21 | 49.86 |
| Zm00001d049928_P005 | Maize | nucleus | 58.35 | 49.13 |
| KRH53978 | Soybean | cytosol | 26.51 | 40.96 |
| Solyc11g044900.1.1 | Tomato | cytosol | 33.22 | 34.96 |
| Bra038277.1-P | Field mustard | cytosol | 26.51 | 33.92 |
| CDX99148 | Canola | cytosol | 26.33 | 33.63 |
| CDX86037 | Canola | cytosol | 26.33 | 32.76 |
| VIT_07s0031g02870.t01 | Wine grape | cytosol | 30.64 | 32.07 |
| PGSC0003DMT400076240 | Potato | nucleus | 32.87 | 31.06 |
| Solyc09g091860.2.1 | Tomato | nucleus | 32.53 | 28.21 |
| Os01t0846450-01 | Rice | cytosol | 9.98 | 28.16 |
| AT3G45760.1 | Thale cress | nucleus | 22.03 | 27.0 |
| PGSC0003DMT400059048 | Potato | plastid | 16.52 | 25.81 |
| AT3G45750.1 | Thale cress | cytosol | 27.19 | 23.17 |
| Os01t0846500-02 | Rice | cytosol | 15.15 | 23.1 |
| Os02t0122100-00 | Rice | cytosol | 13.94 | 22.07 |
| Os10t0188300-01 | Rice | cytosol, nucleus, plastid | 12.22 | 19.09 |
Protein Annotations
| EnsemblPlants:Os08t0559900-01 | EnsemblPlantsGene:Os08g0559900 | EntrezGene:4346320 | Gene3D:1.10.1410.10 | Gene3D:3.30.460.10 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0016740 | GO:GO:0016779 | PANTHER:PTHR12271 | PANTHER:PTHR12271:SF38 | ProteinID:BAD13142.1 |
| ProteinID:BAD13203.1 | ProteinID:BAF24419.1 | ProteinID:BAT06692.1 | RefSeq:XP_015650948.1 | SEG:seg | SUPFAM:SSF81301 |
| SUPFAM:SSF81631 | UniParc:UPI000023B0C3 | UniProt:Q6YYY1 | MapMan:35.1 | : | : |
Description
PAP/25A core domain containing protein. (Os08t0559900-01)
Coordinates
chr8:+:28014059..28019958
Molecular Weight (calculated)
65499.9 Da
IEP (calculated)
9.134
GRAVY (calculated)
-0.365
Length
581 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAASPPVP SKVDASSRPD RSPRPQSLEI SWDSQAALCK RAESCELEAE VPSINPTLLP VLEDLLIELY AILRPKPDDY EQRHLMIDVF NKIAEEIYGK
101: KKGFPVVEAF GSFTMDLFTS KSDLDLSVNF NADFHSQFAR KDKISVIRNL AKVLYAHQRN GRCHGVLPVV TAKVPVLKVI DKGTGVECDI SVENKDGMSR
201: SMIFKLISSI DERFQILCYL MKFWAKAHDV NCPRDRTMSS MAIISLVAFH LQTRRPPILP AFSALLKDGP DFPSIQRNVS LVEGFGSRNK ESVAELFVSL
301: MSKLLSVEGL WEQGLCASNF EGSWIFKTWE RGVGNLSVED FLDRSQNFAR AVGKEEMQKI SECIRVAVLN LNNFFRGKID APKLKNLLFE PPHQDELISN
401: PSLKRPKRKD HPTHGPESNP QQQKKAKHII GPESNQKQQK KVKHTVNPGP AASRSATNLH RPTAFVPQIR PIQPINQVSH IPQPLVDPMF AYGLPPQQHL
501: HSAPLYCQGL LGQQQGNFIH LNPGIQPQQQ AQHMFVPLLE QQPVINGFHP YDFHLAQLIQ HNENIALQRN IAYGTYPYYR R
101: KKGFPVVEAF GSFTMDLFTS KSDLDLSVNF NADFHSQFAR KDKISVIRNL AKVLYAHQRN GRCHGVLPVV TAKVPVLKVI DKGTGVECDI SVENKDGMSR
201: SMIFKLISSI DERFQILCYL MKFWAKAHDV NCPRDRTMSS MAIISLVAFH LQTRRPPILP AFSALLKDGP DFPSIQRNVS LVEGFGSRNK ESVAELFVSL
301: MSKLLSVEGL WEQGLCASNF EGSWIFKTWE RGVGNLSVED FLDRSQNFAR AVGKEEMQKI SECIRVAVLN LNNFFRGKID APKLKNLLFE PPHQDELISN
401: PSLKRPKRKD HPTHGPESNP QQQKKAKHII GPESNQKQQK KVKHTVNPGP AASRSATNLH RPTAFVPQIR PIQPINQVSH IPQPLVDPMF AYGLPPQQHL
501: HSAPLYCQGL LGQQQGNFIH LNPGIQPQQQ AQHMFVPLLE QQPVINGFHP YDFHLAQLIQ HNENIALQRN IAYGTYPYYR R
001: MGSRGNVAED KNVSSKVIRK KVNNTVSIAL KRYKIDSYIL LDLDKVLNDV YCSFRPVSAD YNTRKELVKN LNTMALDIYG KSEESSPVLE AYGSFVMDMY
101: SSQSDLDVSI NFGNGTSEIP REKKLEILKR FAKKLRSLQG EGQVKNVESI FSAKVPIVKF SDQGTGVECD LSVENKDGIL NSQIVRIISQ IDGRFQKLCL
201: LVKHWAKAHE VNSALHRTLN SVSITLLVAL HLQTQNPPIL PPFSMLLKDG MDPPNVEKRA QKFLNWGQRN QESLGRLFAT FFIKLQSVEF LWRQGLCVSV
301: LNGLWISKKW KKVGVGSISV EDFTNISQNV ARRVNGAGAK KIYSSINRTV EDIFEFLNDK VAGTDLRHRL FGKGSVVQIP PVAPLNGKTA GIHKVSGQQA
401: VVQPSPPVPR LNGKIAGTHR KQKVFAQQAV VEPRPPVLPL NGNIAGTHFR HESFRQQAVL QPLPPLRPVN GSIGGTHFRD RLFDQQVLVE PRPLLPPFSG
501: SIAETHFRHR SFPQEAVLDP RPSVQSRNVY SQQLHNNYRN GFSGPPEEHH TKRLCLGNRY RALEETGNWR EEERYEDPRG KRNRYVGNFN GLEEFREIPR
601: FGIHSNPLDD PYRQVPLNAG TNGHLVHHRH DGRYNGEEPM HVGQWQDYTR RVGSPPLQQT PPPYDRVSYE DFRPHLGRSF YH
101: SSQSDLDVSI NFGNGTSEIP REKKLEILKR FAKKLRSLQG EGQVKNVESI FSAKVPIVKF SDQGTGVECD LSVENKDGIL NSQIVRIISQ IDGRFQKLCL
201: LVKHWAKAHE VNSALHRTLN SVSITLLVAL HLQTQNPPIL PPFSMLLKDG MDPPNVEKRA QKFLNWGQRN QESLGRLFAT FFIKLQSVEF LWRQGLCVSV
301: LNGLWISKKW KKVGVGSISV EDFTNISQNV ARRVNGAGAK KIYSSINRTV EDIFEFLNDK VAGTDLRHRL FGKGSVVQIP PVAPLNGKTA GIHKVSGQQA
401: VVQPSPPVPR LNGKIAGTHR KQKVFAQQAV VEPRPPVLPL NGNIAGTHFR HESFRQQAVL QPLPPLRPVN GSIGGTHFRD RLFDQQVLVE PRPLLPPFSG
501: SIAETHFRHR SFPQEAVLDP RPSVQSRNVY SQQLHNNYRN GFSGPPEEHH TKRLCLGNRY RALEETGNWR EEERYEDPRG KRNRYVGNFN GLEEFREIPR
601: FGIHSNPLDD PYRQVPLNAG TNGHLVHHRH DGRYNGEEPM HVGQWQDYTR RVGSPPLQQT PPPYDRVSYE DFRPHLGRSF YH
Arabidopsis Description
Nucleotidyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q7Y216]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.