Factsheet for Os10t0188300-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

plastid 3
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG32580	Sorghum	cytosol	47.58	75.97
GSMUA_Achr2P01000_001	Banana	cytosol, mitochondrion, nucleus	65.32	70.85
GSMUA_Achr11P...	Banana	cytosol	63.98	64.67
Os02t0122100-00	Rice	cytosol	56.72	57.49
Zm00001d014321_P007	Maize	plastid	76.88	36.25
TraesCS1D01G133800.1	Wheat	nucleus, plastid	77.96	35.02
TraesCS1A01G139400.1	Wheat	nucleus	77.69	34.9
PGSC0003DMT400000387	Potato	plastid	64.78	33.99
TraesCS1B01G149800.1	Wheat	nucleus	77.69	33.84
KRH48314	Soybean	endoplasmic reticulum	65.59	33.33
HORVU1Hr1G031950.1	Barley	plastid	77.15	33.26
KRH65203	Soybean	nucleus	65.32	33.24
CDY27369	Canola	nucleus	64.25	33.19
VIT_15s0048g01340.t01	Wine grape	nucleus	63.98	32.92
CDY37053	Canola	nucleus	63.71	32.73
Solyc01g094000.2.1	Tomato	nucleus	65.59	31.48
Bra039325.1-P	Field mustard	nucleus	63.71	31.18
AT2G45620.1	Thale cress	nucleus	62.9	30.63
KXG38754	Sorghum	plastid	54.84	28.98
Os09t0570600-01	Rice	cytosol	16.94	20.32
Os01t0846450-01	Rice	cytosol	10.48	18.93
Os01t0846500-02	Rice	cytosol	18.01	17.59
Os08t0559900-01	Rice	nucleus	19.09	12.22

Protein Annotations

EnsemblPlants:Os10t0188300-01	EnsemblPlantsGene:Os10g0188300	Gene3D:1.10.1410.10	Gene3D:3.30.460.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016779	InterPro:PAP_assoc	InterPro:Polymerase_NTP_transf_dom	PANTHER:PTHR12271	PANTHER:PTHR12271:SF53
PFAM:PF01909	PFAM:PF03828	ProteinID:BAT10175.1	SUPFAM:SSF81301	SUPFAM:SSF81631	UniParc:UPI0000DD9919
UniProt:A0A0P0XSC2	MapMan:16.10.2.6.2	:	:	:	:

Description

Similar to JHL05D22.13 protein. (Os10t0188300-01)

Coordinates

chr10:+:6104501..6110244

Molecular Weight (calculated)

42907.4 Da

IEP (calculated)

8.581

GRAVY (calculated)

-0.338

Length

372 amino acids

Sequence
(BLAST)

001: GEAKSTVVQI NGSRSKNFRS DSRGKNVSSQ SVRFQRRIRP CRYDIDQFTP SFMSIFESLV PSDEEISKQK QLLATLSRLI NKEWPNSKLY LYGSCANSFG
101: FSNSDIDLCL SIDEKEMSKV DIILKLAHIL HAGNLRNIQA LTRARVPIVK LMDPNTGLSC DICVNNLLAV VNTKLLRDYS RIDKRLRPLA FIVKHWAKSR
201: CVNETYQGTL SSYAYVIMCI HYLQSQRILP CLQEMEPTYY VTVDNNICAY FDQVDKLNGF GAQCKDTLSR LLWGFFRYWA YAHNYTKDVI SIRTGRTISK
301: NMKDWTRRIG NDRHLICIED PFETSHDLGR VVDNRSIWAL REEFERAAEI LHLDPNPSIT LFEPYVPSEA ET

Best Arabidopsis Sequence Match ( AT2G45620.1 )
(BLAST)

001: MADGGAEPPA PPSSINAGEF LLSILHGSPS PSSQGPQHHQ SFALDPAIAA IGPTVNNPFP PSNWQSNGHR PSNHNPPSWP LAFSPPHNLS PNFLGFPQFP
101: PSPFTTNQFD GNQRVSPEDA YRLGFPGTTN PAIQSMVQQQ QQQQLPPPQS ETRKLVFGSF SGDATQSLNG LHNGNLKYDS NQHEQLMRHP QSTLSNSNMD
201: PNLSHHRNHD LHEQRGGHSG RGNWGHIGNN GRGLKSTPPP PPPGFSSNQR GWDMSLGSKD DDRGMGRNHD QAMGEHSKVW NQSVDFSAEA NRLRGLSIQN
301: ESKFNLSQQI DHPGPPKGAS LHSVSAADAA DSFSMLNKEA RRGGERREEL GQLSKAKREG NANSDEIEDF GEDIVKSLLL EDETGEKDAN DGKKDSKTSR
401: EKESRVDNRG QRLLGQKARM VKMYMACRND IHRYDATFIA IYKSLIPAEE ELEKQRQLMA HLENLVAKEW PHAKLYLYGS CANSFGFPKS DIDVCLAIEG
501: DDINKSEMLL KLAEILESDN LQNVQALTRA RVPIVKLMDP VTGISCDICI NNVLAVVNTK LLRDYAQIDV RLRQLAFIVK HWAKSRRVNE TYQGTLSSYA
601: YVLMCIHFLQ QRRPPILPCL QEMEPTYSVR VDNIRCTYFD NVDRLRNFGS NNRETIAELV WGFFNYWAYA HDYAYNVVSV RTGSILGKRE KDWTRRVGND
701: RHLICIEDPF ETSHDLGRVV DKFSIRVLRE EFERAARIMH QDPNPCAKLL EPYIPEDNNG QGHN

Arabidopsis Description

URT1UTP:RNA uridylyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:O64642]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.