Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37053 | Canola | nucleus | 84.87 | 89.09 |
| CDY27369 | Canola | nucleus | 80.39 | 84.86 |
| GSMUA_Achr2P01000_001 | Banana | cytosol, mitochondrion, nucleus | 31.84 | 70.55 |
| KXG32580 | Sorghum | cytosol | 21.18 | 69.1 |
| TraesCS6B01G090200.1 | Wheat | cytosol | 19.21 | 66.06 |
| GSMUA_Achr11P... | Banana | cytosol | 31.05 | 64.13 |
| Os10t0188300-01 | Rice | cytosol, nucleus, plastid | 31.18 | 63.71 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus | 28.68 | 63.56 |
| Os02t0122100-00 | Rice | cytosol | 28.42 | 58.86 |
| AT2G45620.1 | Thale cress | nucleus | 55.79 | 55.5 |
| HORVU6Hr1G012060.3 | Barley | cytosol, nucleus | 28.82 | 51.05 |
| VIT_15s0048g01340.t01 | Wine grape | nucleus | 45.0 | 47.3 |
| KRH48314 | Soybean | endoplasmic reticulum | 43.16 | 44.81 |
| KRH65203 | Soybean | nucleus | 41.84 | 43.5 |
| PGSC0003DMT400000387 | Potato | plastid | 40.0 | 42.88 |
| Solyc01g094000.2.1 | Tomato | nucleus | 43.03 | 42.19 |
| TraesCSU01G117200.1 | Wheat | cytosol | 30.79 | 39.8 |
| TraesCS6A01G067000.1 | Wheat | cytosol | 30.79 | 39.66 |
| Zm00001d015059_P001 | Maize | nucleus | 29.87 | 37.4 |
| OQU84248 | Sorghum | nucleus | 29.47 | 34.62 |
| Zm00001d014321_P007 | Maize | plastid | 34.87 | 33.59 |
| TraesCS1D01G133800.1 | Wheat | nucleus, plastid | 36.45 | 33.45 |
| TraesCS1A01G139400.1 | Wheat | nucleus | 36.32 | 33.33 |
| TraesCS1B01G149800.1 | Wheat | nucleus | 36.32 | 32.32 |
| HORVU1Hr1G031950.1 | Barley | plastid | 35.79 | 31.52 |
| KXG38754 | Sorghum | plastid | 25.53 | 27.56 |
| Bra038277.1-P | Field mustard | cytosol | 11.18 | 18.72 |
| Bra017054.1-P | Field mustard | cytosol | 9.74 | 14.65 |
Protein Annotations
| Gene3D:1.10.1410.10 | MapMan:16.10.2.6.2 | Gene3D:3.30.460.10 | EnsemblPlantsGene:Bra039325 | EnsemblPlants:Bra039325.1 | EnsemblPlants:Bra039325.1-P |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016740 | GO:GO:0016779 | GO:GO:0019538 | GO:GO:0040029 | GO:GO:0050265 |
| GO:GO:0060964 | GO:GO:0071076 | GO:GO:1903705 | UniProt:M4FE04 | InterPro:PAP_assoc | PFAM:PF01909 |
| PFAM:PF03828 | PANTHER:PTHR12271 | PANTHER:PTHR12271:SF53 | InterPro:Polymerase_NTP_transf_dom | SUPFAM:SSF81301 | SUPFAM:SSF81631 |
| UniParc:UPI0002544444 | SEG:seg | : | : | : | : |
Description
AT2G45620 (E=1e-258) | nucleotidyltransferase family protein
Coordinates
chrA04:+:18599344..18602089
Molecular Weight (calculated)
84592.2 Da
IEP (calculated)
6.549
GRAVY (calculated)
-0.702
Length
760 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEGGGGDSP APPSDNNGGG EFLLSLLHRR PHQQSPPIRP PAPPPPSQSF TLDPAIAAVG PTLNSNWASN GTPPWPHASS PPNLLGFPQF QENPFPSNQF
101: DGNQRLSGED AYRLGFNGAG IHHSMVQQQP QRLVFGSFSG DATQSGFLNG SLNSSKDPNF SHPGSIGRGN WGPIGNNGRG AKSTPPPGFS SNQRAWDRDL
201: LTRDADRGML MGRGMMGNHD DRGMMNSFQR NHDDRGMMGG FQRIYDGRGM MGSSQRSHDN AKGEHHNAWD KSAVDLSAEN DRLRRLSIQD EGRFNLTQQV
301: DHPGPPMGKS LHSVSAADAQ DSFSMLNKEA RGGGQYREEM GQLSKGKREG SGEFGPAEGE TEGFGEDIVE SVLLEDETDD KDAKDEKKTS KTSREKESRM
401: DTRGQWLLGQ RLRMVKRYMA CRNDIHRHDA PFIAVYKSLI PAEEELEKQK QLMAKLDNLV AKEWPNAKLY LYGSCANSFG FPKSDIDVCL AIDDDDVNKS
501: EILLKLADSL ESDHFQNVQA LTRARVPIVK LMDPVTGISC DICINNVLAV VNTKLLRDYS MIDGRLRQLA FIVKHWAKSR KVNETYQGTL SSYAYVLMCI
601: HYLQQRSPPI LPCLQEMEPT YSVRVDNIQC AYFDNVGRLS TFGSSNRETI AELVWGFFNY WAYGHDYANT VVSVRTGSIL GKREKDWTRR VGNDRHLICI
701: EDPFETSHDL GRVVDKFSIR VLREEFERAA KIMHQDPNPC AKLFEPYVPG DDNGNGQGHN
101: DGNQRLSGED AYRLGFNGAG IHHSMVQQQP QRLVFGSFSG DATQSGFLNG SLNSSKDPNF SHPGSIGRGN WGPIGNNGRG AKSTPPPGFS SNQRAWDRDL
201: LTRDADRGML MGRGMMGNHD DRGMMNSFQR NHDDRGMMGG FQRIYDGRGM MGSSQRSHDN AKGEHHNAWD KSAVDLSAEN DRLRRLSIQD EGRFNLTQQV
301: DHPGPPMGKS LHSVSAADAQ DSFSMLNKEA RGGGQYREEM GQLSKGKREG SGEFGPAEGE TEGFGEDIVE SVLLEDETDD KDAKDEKKTS KTSREKESRM
401: DTRGQWLLGQ RLRMVKRYMA CRNDIHRHDA PFIAVYKSLI PAEEELEKQK QLMAKLDNLV AKEWPNAKLY LYGSCANSFG FPKSDIDVCL AIDDDDVNKS
501: EILLKLADSL ESDHFQNVQA LTRARVPIVK LMDPVTGISC DICINNVLAV VNTKLLRDYS MIDGRLRQLA FIVKHWAKSR KVNETYQGTL SSYAYVLMCI
601: HYLQQRSPPI LPCLQEMEPT YSVRVDNIQC AYFDNVGRLS TFGSSNRETI AELVWGFFNY WAYGHDYANT VVSVRTGSIL GKREKDWTRR VGNDRHLICI
701: EDPFETSHDL GRVVDKFSIR VLREEFERAA KIMHQDPNPC AKLFEPYVPG DDNGNGQGHN
001: MADGGAEPPA PPSSINAGEF LLSILHGSPS PSSQGPQHHQ SFALDPAIAA IGPTVNNPFP PSNWQSNGHR PSNHNPPSWP LAFSPPHNLS PNFLGFPQFP
101: PSPFTTNQFD GNQRVSPEDA YRLGFPGTTN PAIQSMVQQQ QQQQLPPPQS ETRKLVFGSF SGDATQSLNG LHNGNLKYDS NQHEQLMRHP QSTLSNSNMD
201: PNLSHHRNHD LHEQRGGHSG RGNWGHIGNN GRGLKSTPPP PPPGFSSNQR GWDMSLGSKD DDRGMGRNHD QAMGEHSKVW NQSVDFSAEA NRLRGLSIQN
301: ESKFNLSQQI DHPGPPKGAS LHSVSAADAA DSFSMLNKEA RRGGERREEL GQLSKAKREG NANSDEIEDF GEDIVKSLLL EDETGEKDAN DGKKDSKTSR
401: EKESRVDNRG QRLLGQKARM VKMYMACRND IHRYDATFIA IYKSLIPAEE ELEKQRQLMA HLENLVAKEW PHAKLYLYGS CANSFGFPKS DIDVCLAIEG
501: DDINKSEMLL KLAEILESDN LQNVQALTRA RVPIVKLMDP VTGISCDICI NNVLAVVNTK LLRDYAQIDV RLRQLAFIVK HWAKSRRVNE TYQGTLSSYA
601: YVLMCIHFLQ QRRPPILPCL QEMEPTYSVR VDNIRCTYFD NVDRLRNFGS NNRETIAELV WGFFNYWAYA HDYAYNVVSV RTGSILGKRE KDWTRRVGND
701: RHLICIEDPF ETSHDLGRVV DKFSIRVLRE EFERAARIMH QDPNPCAKLL EPYIPEDNNG QGHN
101: PSPFTTNQFD GNQRVSPEDA YRLGFPGTTN PAIQSMVQQQ QQQQLPPPQS ETRKLVFGSF SGDATQSLNG LHNGNLKYDS NQHEQLMRHP QSTLSNSNMD
201: PNLSHHRNHD LHEQRGGHSG RGNWGHIGNN GRGLKSTPPP PPPGFSSNQR GWDMSLGSKD DDRGMGRNHD QAMGEHSKVW NQSVDFSAEA NRLRGLSIQN
301: ESKFNLSQQI DHPGPPKGAS LHSVSAADAA DSFSMLNKEA RRGGERREEL GQLSKAKREG NANSDEIEDF GEDIVKSLLL EDETGEKDAN DGKKDSKTSR
401: EKESRVDNRG QRLLGQKARM VKMYMACRND IHRYDATFIA IYKSLIPAEE ELEKQRQLMA HLENLVAKEW PHAKLYLYGS CANSFGFPKS DIDVCLAIEG
501: DDINKSEMLL KLAEILESDN LQNVQALTRA RVPIVKLMDP VTGISCDICI NNVLAVVNTK LLRDYAQIDV RLRQLAFIVK HWAKSRRVNE TYQGTLSSYA
601: YVLMCIHFLQ QRRPPILPCL QEMEPTYSVR VDNIRCTYFD NVDRLRNFGS NNRETIAELV WGFFNYWAYA HDYAYNVVSV RTGSILGKRE KDWTRRVGND
701: RHLICIEDPF ETSHDLGRVV DKFSIRVLRE EFERAARIMH QDPNPCAKLL EPYIPEDNNG QGHN
Arabidopsis Description
URT1UTP:RNA uridylyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:O64642]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.