Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- peroxisome 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG32580 | Sorghum | cytosol | 27.38 | 92.7 |
| Os10t0188300-01 | Rice | cytosol, nucleus, plastid | 36.25 | 76.88 |
| GSMUA_Achr2P01000_001 | Banana | cytosol, mitochondrion, nucleus | 31.69 | 72.89 |
| GSMUA_Achr11P... | Banana | cytosol | 32.07 | 68.75 |
| KXG38754 | Sorghum | plastid | 51.33 | 57.53 |
| TraesCS1D01G133800.1 | Wheat | nucleus, plastid | 48.29 | 46.01 |
| TraesCS1A01G139400.1 | Wheat | nucleus | 47.91 | 45.65 |
| TraesCS1B01G149800.1 | Wheat | nucleus | 47.91 | 44.26 |
| HORVU1Hr1G031950.1 | Barley | plastid | 47.4 | 43.34 |
| VIT_15s0048g01340.t01 | Wine grape | nucleus | 36.12 | 39.42 |
| KRH65203 | Soybean | nucleus | 36.5 | 39.4 |
| KRH48314 | Soybean | endoplasmic reticulum | 36.5 | 39.34 |
| CDY27369 | Canola | nucleus | 34.09 | 37.36 |
| CDY37053 | Canola | nucleus | 33.84 | 36.88 |
| Solyc01g094000.2.1 | Tomato | nucleus | 34.85 | 35.48 |
| PGSC0003DMT400000387 | Potato | plastid | 31.81 | 35.4 |
| Zm00001d015059_P001 | Maize | nucleus | 27.12 | 35.26 |
| Bra039325.1-P | Field mustard | nucleus | 33.59 | 34.87 |
| AT2G45620.1 | Thale cress | nucleus | 33.08 | 34.16 |
| Zm00001d019808_P003 | Maize | cytosol | 6.21 | 19.07 |
| Zm00001d042885_P006 | Maize | nucleus | 8.49 | 11.53 |
| Zm00001d049928_P005 | Maize | nucleus | 9.63 | 11.01 |
| Zm00001d019809_P001 | Maize | mitochondrion | 2.66 | 6.4 |
Protein Annotations
| EnsemblPlants:Zm00001d014321_P007 | EnsemblPlants:Zm00001d014321_T007 | EnsemblPlantsGene:Zm00001d014321 | EntrezGene:103626268 | Gene3D:1.10.1410.10 | Gene3D:3.30.460.10 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 | GO:GO:0016779 | InterPro:PAP_assoc | PANTHER:PTHR12271 |
| PANTHER:PTHR12271:SF53 | PFAM:PF03828 | ProteinID:AQK65853.1 | SEG:seg | SUPFAM:SSF81301 | SUPFAM:SSF81631 |
| UniParc:UPI00084496FD | UniProt:A0A1D6GS05 | MapMan:16.10.2.6.2 | : | : | : |
Description
UTP:RNA uridylyltransferase 1
Coordinates
chr5:-:40895451..40903341
Molecular Weight (calculated)
88055.2 Da
IEP (calculated)
7.291
GRAVY (calculated)
-0.493
Length
789 amino acids
Sequence
(BLAST)
(BLAST)
001: MADSSGRSGG RPTSASPSTA THTSPASFDG GLLLRLLQNP PSAHPREEIL APSPVAPGAH HFFSDPAVAA VGPLFAASAQ TQGGDFGWSS TSTTHVQQQP
101: RFSDPRFAPG DPFAALGGRG FGSGDAVRAE RPRSGAPPPG FGKPSHPLPA ARDARSASGV VLRKEQYNPR PVDFVPALAD VRDPVGRMPH GHGEQFYREQ
201: QQDRFLSRTP PEINANGQFG RMPIGEQHTL PILGGRRLHV DQYMPPVQEG RAPHGGHGKH ESRLTNPLQR EQRWQGLRED KGYASRKLPN VNAHYTSGKA
301: LVKEVHHLTI PAGSSVPVEI TENQASGLEG GRIGKVVLED GIDEEGVVEA SKFEVSYEKS KIRFAGHDEQ DDGGDREDAI IEQMAQNLLI DGNGDAKGVV
401: LEKPILRSKD FRSDFSRGHH VSSQRIRFQR RNRPCRYDID RFTPNFLSIF ESLVPSEEEI ANQKQLLTSL SRLINTEWPN SKLYLYGSCA NSFGFSNSDI
501: DLCLSIDNKE MSKVDIILKL ADIFQAGNLQ NIQVSSGIIP CVPLTRARVP IVKLMDPKTG LSCDICVNNL LAVVNTKLLR DYGQIDKRLQ QLAFIVKHWA
601: KTRRVNETYQ GTLSSYAYVI MCIHLLQLRR ILPCLQEMEA TYYVKVEEIN CAYFDQVDKL NNYGAHNRDT VSRLLWSFFH YWAYEHDYTR DVISIRTGRI
701: ISKERKDWTR RVGNDRHLIC IEDPFEISHD LGRVVDKFTI KILREEFERA ANILQFDPNP SVTLFEPYVP PPSPSLLQEE TANAAEIEL
101: RFSDPRFAPG DPFAALGGRG FGSGDAVRAE RPRSGAPPPG FGKPSHPLPA ARDARSASGV VLRKEQYNPR PVDFVPALAD VRDPVGRMPH GHGEQFYREQ
201: QQDRFLSRTP PEINANGQFG RMPIGEQHTL PILGGRRLHV DQYMPPVQEG RAPHGGHGKH ESRLTNPLQR EQRWQGLRED KGYASRKLPN VNAHYTSGKA
301: LVKEVHHLTI PAGSSVPVEI TENQASGLEG GRIGKVVLED GIDEEGVVEA SKFEVSYEKS KIRFAGHDEQ DDGGDREDAI IEQMAQNLLI DGNGDAKGVV
401: LEKPILRSKD FRSDFSRGHH VSSQRIRFQR RNRPCRYDID RFTPNFLSIF ESLVPSEEEI ANQKQLLTSL SRLINTEWPN SKLYLYGSCA NSFGFSNSDI
501: DLCLSIDNKE MSKVDIILKL ADIFQAGNLQ NIQVSSGIIP CVPLTRARVP IVKLMDPKTG LSCDICVNNL LAVVNTKLLR DYGQIDKRLQ QLAFIVKHWA
601: KTRRVNETYQ GTLSSYAYVI MCIHLLQLRR ILPCLQEMEA TYYVKVEEIN CAYFDQVDKL NNYGAHNRDT VSRLLWSFFH YWAYEHDYTR DVISIRTGRI
701: ISKERKDWTR RVGNDRHLIC IEDPFEISHD LGRVVDKFTI KILREEFERA ANILQFDPNP SVTLFEPYVP PPSPSLLQEE TANAAEIEL
001: MADGGAEPPA PPSSINAGEF LLSILHGSPS PSSQGPQHHQ SFALDPAIAA IGPTVNNPFP PSNWQSNGHR PSNHNPPSWP LAFSPPHNLS PNFLGFPQFP
101: PSPFTTNQFD GNQRVSPEDA YRLGFPGTTN PAIQSMVQQQ QQQQLPPPQS ETRKLVFGSF SGDATQSLNG LHNGNLKYDS NQHEQLMRHP QSTLSNSNMD
201: PNLSHHRNHD LHEQRGGHSG RGNWGHIGNN GRGLKSTPPP PPPGFSSNQR GWDMSLGSKD DDRGMGRNHD QAMGEHSKVW NQSVDFSAEA NRLRGLSIQN
301: ESKFNLSQQI DHPGPPKGAS LHSVSAADAA DSFSMLNKEA RRGGERREEL GQLSKAKREG NANSDEIEDF GEDIVKSLLL EDETGEKDAN DGKKDSKTSR
401: EKESRVDNRG QRLLGQKARM VKMYMACRND IHRYDATFIA IYKSLIPAEE ELEKQRQLMA HLENLVAKEW PHAKLYLYGS CANSFGFPKS DIDVCLAIEG
501: DDINKSEMLL KLAEILESDN LQNVQALTRA RVPIVKLMDP VTGISCDICI NNVLAVVNTK LLRDYAQIDV RLRQLAFIVK HWAKSRRVNE TYQGTLSSYA
601: YVLMCIHFLQ QRRPPILPCL QEMEPTYSVR VDNIRCTYFD NVDRLRNFGS NNRETIAELV WGFFNYWAYA HDYAYNVVSV RTGSILGKRE KDWTRRVGND
701: RHLICIEDPF ETSHDLGRVV DKFSIRVLRE EFERAARIMH QDPNPCAKLL EPYIPEDNNG QGHN
101: PSPFTTNQFD GNQRVSPEDA YRLGFPGTTN PAIQSMVQQQ QQQQLPPPQS ETRKLVFGSF SGDATQSLNG LHNGNLKYDS NQHEQLMRHP QSTLSNSNMD
201: PNLSHHRNHD LHEQRGGHSG RGNWGHIGNN GRGLKSTPPP PPPGFSSNQR GWDMSLGSKD DDRGMGRNHD QAMGEHSKVW NQSVDFSAEA NRLRGLSIQN
301: ESKFNLSQQI DHPGPPKGAS LHSVSAADAA DSFSMLNKEA RRGGERREEL GQLSKAKREG NANSDEIEDF GEDIVKSLLL EDETGEKDAN DGKKDSKTSR
401: EKESRVDNRG QRLLGQKARM VKMYMACRND IHRYDATFIA IYKSLIPAEE ELEKQRQLMA HLENLVAKEW PHAKLYLYGS CANSFGFPKS DIDVCLAIEG
501: DDINKSEMLL KLAEILESDN LQNVQALTRA RVPIVKLMDP VTGISCDICI NNVLAVVNTK LLRDYAQIDV RLRQLAFIVK HWAKSRRVNE TYQGTLSSYA
601: YVLMCIHFLQ QRRPPILPCL QEMEPTYSVR VDNIRCTYFD NVDRLRNFGS NNRETIAELV WGFFNYWAYA HDYAYNVVSV RTGSILGKRE KDWTRRVGND
701: RHLICIEDPF ETSHDLGRVV DKFSIRVLRE EFERAARIMH QDPNPCAKLL EPYIPEDNNG QGHN
Arabidopsis Description
URT1UTP:RNA uridylyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:O64642]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.