Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G133800.1 | Wheat | nucleus, plastid | 98.19 | 98.19 |
| TraesCS1B01G149800.1 | Wheat | nucleus | 96.26 | 93.33 |
| HORVU1Hr1G031950.1 | Barley | plastid | 87.44 | 83.89 |
| KXG32580 | Sorghum | cytosol | 23.55 | 83.69 |
| Os10t0188300-01 | Rice | cytosol, nucleus, plastid | 34.9 | 77.69 |
| GSMUA_Achr2P01000_001 | Banana | cytosol, mitochondrion, nucleus | 30.8 | 74.34 |
| GSMUA_Achr11P... | Banana | cytosol | 31.16 | 70.11 |
| Zm00001d014321_P007 | Maize | plastid | 45.65 | 47.91 |
| KXG38754 | Sorghum | plastid | 37.68 | 44.32 |
| KRH48314 | Soybean | endoplasmic reticulum | 35.51 | 40.16 |
| TraesCS6A01G067000.1 | Wheat | cytosol | 28.38 | 39.83 |
| KRH65203 | Soybean | nucleus | 34.66 | 39.26 |
| VIT_15s0048g01340.t01 | Wine grape | nucleus | 33.82 | 38.73 |
| CDY37053 | Canola | nucleus | 33.21 | 37.98 |
| CDY27369 | Canola | nucleus | 32.85 | 37.78 |
| Solyc01g094000.2.1 | Tomato | nucleus | 35.27 | 37.68 |
| PGSC0003DMT400000387 | Potato | plastid | 31.88 | 37.24 |
| AT2G45620.1 | Thale cress | nucleus | 33.7 | 36.52 |
| Bra039325.1-P | Field mustard | nucleus | 33.33 | 36.32 |
| TraesCS4A01G311100.1 | Wheat | nucleus | 8.82 | 13.13 |
| TraesCS7A01G280800.1 | Wheat | cytosol | 8.09 | 11.92 |
| TraesCS3A01G362300.1 | Wheat | nucleus | 8.33 | 10.65 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G139400.1 | EnsemblPlantsGene:TraesCS1A01G139400 | Gene3D:1.10.1410.10 | Gene3D:3.30.460.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016740 | GO:GO:0016779 | InterPro:PAP_assoc | InterPro:Polymerase_NTP_transf_dom | PANTHER:PTHR12271 | PANTHER:PTHR12271:SF53 |
| PFAM:PF01909 | PFAM:PF03828 | SEG:seg | SUPFAM:SSF81301 | SUPFAM:SSF81631 | TIGR:cd05402 |
| MapMan:16.10.2.6.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1A:+:235652209..235688637
Molecular Weight (calculated)
92267.0 Da
IEP (calculated)
7.256
GRAVY (calculated)
-0.539
Length
828 amino acids
Sequence
(BLAST)
(BLAST)
001: MADASSGGGG RAPRPSTSPS DAKLEPSASA SLDGGLLLRL LQNPSPRPQQ QQNPVQPLAE PNNFFVDPAV AAVGLMFSSP PYVHVGGFAW PSSSSPQPQL
101: RSSDPRIAQP LDPYAERVGG GFRSVDVVSR NRPEKPRSGA PPPGFGKPSP PKFATAWHSA TGREVHDVFG AMQQNRERQR EPNYHHPKGF GRTHNSENQE
201: MPTFTGGQGV LGRLPHEERS TSLIIGSRGP AAVMMYREQQ QQQHDHILSR TPPDANASAN AHGITGRIPH GDQHILQFAG GRTLIGEHHI HPSTGARIPH
301: KGQRQQETCL ADISQGDQRW QGHASRNLSA GTVLEMLGKM PMKEKHQVTA PSSSSVDMDV RGDRGKKFLA EATGLEVGVG EVGFEHGVHG RVVVDARNFK
401: VSCQNSEVRF AAKKEEEDAD SKEEDAIIEQ FMDTMVIEGN DEAKGMVMRN SGSRSKDFRS DSSRGHHVSS QRVRFQRRVR ACRYDIDQFT PNFLSIFDSL
501: VPSEEEIAKQ NQLVITLSRL INKEWPNSKL YLYGSCANSF GFSNSDIDLC LSIDDKEMSK VDIILKLADI LQAGNLQNIQ ALTRARVPIV KLMDPDTGLS
601: CDICVNNLLA VVNTKLLRDY AQIDQRLRQL AFIVKHWAKS RRVNETYQGT LSSYSYVIMC IHLLQLRRIL PCLQEMEATC YVTVDDNHYA YFDQMDKLSN
701: YGAHNNETLS SLLWAFFHYW AYQHDYTQDV ISIRTGKIIS KHMKDWTRRV GNDRHLICIE DPFETSHDLG RVVDKFSIKI LREEFERAAN ILQYDPNPSV
801: KLFEPYVPPP PSGTLDEEGI LSTAGAII
101: RSSDPRIAQP LDPYAERVGG GFRSVDVVSR NRPEKPRSGA PPPGFGKPSP PKFATAWHSA TGREVHDVFG AMQQNRERQR EPNYHHPKGF GRTHNSENQE
201: MPTFTGGQGV LGRLPHEERS TSLIIGSRGP AAVMMYREQQ QQQHDHILSR TPPDANASAN AHGITGRIPH GDQHILQFAG GRTLIGEHHI HPSTGARIPH
301: KGQRQQETCL ADISQGDQRW QGHASRNLSA GTVLEMLGKM PMKEKHQVTA PSSSSVDMDV RGDRGKKFLA EATGLEVGVG EVGFEHGVHG RVVVDARNFK
401: VSCQNSEVRF AAKKEEEDAD SKEEDAIIEQ FMDTMVIEGN DEAKGMVMRN SGSRSKDFRS DSSRGHHVSS QRVRFQRRVR ACRYDIDQFT PNFLSIFDSL
501: VPSEEEIAKQ NQLVITLSRL INKEWPNSKL YLYGSCANSF GFSNSDIDLC LSIDDKEMSK VDIILKLADI LQAGNLQNIQ ALTRARVPIV KLMDPDTGLS
601: CDICVNNLLA VVNTKLLRDY AQIDQRLRQL AFIVKHWAKS RRVNETYQGT LSSYSYVIMC IHLLQLRRIL PCLQEMEATC YVTVDDNHYA YFDQMDKLSN
701: YGAHNNETLS SLLWAFFHYW AYQHDYTQDV ISIRTGKIIS KHMKDWTRRV GNDRHLICIE DPFETSHDLG RVVDKFSIKI LREEFERAAN ILQYDPNPSV
801: KLFEPYVPPP PSGTLDEEGI LSTAGAII
001: MADGGAEPPA PPSSINAGEF LLSILHGSPS PSSQGPQHHQ SFALDPAIAA IGPTVNNPFP PSNWQSNGHR PSNHNPPSWP LAFSPPHNLS PNFLGFPQFP
101: PSPFTTNQFD GNQRVSPEDA YRLGFPGTTN PAIQSMVQQQ QQQQLPPPQS ETRKLVFGSF SGDATQSLNG LHNGNLKYDS NQHEQLMRHP QSTLSNSNMD
201: PNLSHHRNHD LHEQRGGHSG RGNWGHIGNN GRGLKSTPPP PPPGFSSNQR GWDMSLGSKD DDRGMGRNHD QAMGEHSKVW NQSVDFSAEA NRLRGLSIQN
301: ESKFNLSQQI DHPGPPKGAS LHSVSAADAA DSFSMLNKEA RRGGERREEL GQLSKAKREG NANSDEIEDF GEDIVKSLLL EDETGEKDAN DGKKDSKTSR
401: EKESRVDNRG QRLLGQKARM VKMYMACRND IHRYDATFIA IYKSLIPAEE ELEKQRQLMA HLENLVAKEW PHAKLYLYGS CANSFGFPKS DIDVCLAIEG
501: DDINKSEMLL KLAEILESDN LQNVQALTRA RVPIVKLMDP VTGISCDICI NNVLAVVNTK LLRDYAQIDV RLRQLAFIVK HWAKSRRVNE TYQGTLSSYA
601: YVLMCIHFLQ QRRPPILPCL QEMEPTYSVR VDNIRCTYFD NVDRLRNFGS NNRETIAELV WGFFNYWAYA HDYAYNVVSV RTGSILGKRE KDWTRRVGND
701: RHLICIEDPF ETSHDLGRVV DKFSIRVLRE EFERAARIMH QDPNPCAKLL EPYIPEDNNG QGHN
101: PSPFTTNQFD GNQRVSPEDA YRLGFPGTTN PAIQSMVQQQ QQQQLPPPQS ETRKLVFGSF SGDATQSLNG LHNGNLKYDS NQHEQLMRHP QSTLSNSNMD
201: PNLSHHRNHD LHEQRGGHSG RGNWGHIGNN GRGLKSTPPP PPPGFSSNQR GWDMSLGSKD DDRGMGRNHD QAMGEHSKVW NQSVDFSAEA NRLRGLSIQN
301: ESKFNLSQQI DHPGPPKGAS LHSVSAADAA DSFSMLNKEA RRGGERREEL GQLSKAKREG NANSDEIEDF GEDIVKSLLL EDETGEKDAN DGKKDSKTSR
401: EKESRVDNRG QRLLGQKARM VKMYMACRND IHRYDATFIA IYKSLIPAEE ELEKQRQLMA HLENLVAKEW PHAKLYLYGS CANSFGFPKS DIDVCLAIEG
501: DDINKSEMLL KLAEILESDN LQNVQALTRA RVPIVKLMDP VTGISCDICI NNVLAVVNTK LLRDYAQIDV RLRQLAFIVK HWAKSRRVNE TYQGTLSSYA
601: YVLMCIHFLQ QRRPPILPCL QEMEPTYSVR VDNIRCTYFD NVDRLRNFGS NNRETIAELV WGFFNYWAYA HDYAYNVVSV RTGSILGKRE KDWTRRVGND
701: RHLICIEDPF ETSHDLGRVV DKFSIRVLRE EFERAARIMH QDPNPCAKLL EPYIPEDNNG QGHN
Arabidopsis Description
URT1UTP:RNA uridylyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:O64642]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.