Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400000387 | Potato | plastid | 76.65 | 83.78 |
| GSMUA_Achr2P01000_001 | Banana | cytosol, mitochondrion, nucleus | 32.77 | 74.05 |
| KXG32580 | Sorghum | cytosol | 21.55 | 71.67 |
| GSMUA_Achr11P... | Banana | cytosol | 32.13 | 67.66 |
| TraesCS6B01G090200.1 | Wheat | cytosol | 19.1 | 66.97 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus | 29.55 | 66.76 |
| Os10t0188300-01 | Rice | cytosol, nucleus, plastid | 31.48 | 65.59 |
| Os02t0122100-00 | Rice | cytosol | 28.26 | 59.67 |
| HORVU6Hr1G012060.3 | Barley | cytosol, nucleus | 28.0 | 50.58 |
| VIT_15s0048g01340.t01 | Wine grape | nucleus | 44.52 | 47.72 |
| CDY27369 | Canola | nucleus | 43.61 | 46.94 |
| KRH48314 | Soybean | endoplasmic reticulum | 43.87 | 46.45 |
| CDY37053 | Canola | nucleus | 41.94 | 44.89 |
| KRH65203 | Soybean | nucleus | 42.06 | 44.6 |
| AT2G45620.1 | Thale cress | nucleus | 42.45 | 43.06 |
| Bra039325.1-P | Field mustard | nucleus | 42.19 | 43.03 |
| TraesCSU01G117200.1 | Wheat | cytosol | 31.23 | 41.16 |
| TraesCS6A01G067000.1 | Wheat | cytosol | 30.71 | 40.34 |
| OQU84248 | Sorghum | nucleus | 31.1 | 37.25 |
| Zm00001d015059_P001 | Maize | nucleus | 28.9 | 36.9 |
| TraesCS1D01G133800.1 | Wheat | nucleus, plastid | 38.06 | 35.63 |
| TraesCS1A01G139400.1 | Wheat | nucleus | 37.68 | 35.27 |
| Zm00001d014321_P007 | Maize | plastid | 35.48 | 34.85 |
| TraesCS1B01G149800.1 | Wheat | nucleus | 38.06 | 34.54 |
| HORVU1Hr1G031950.1 | Barley | plastid | 37.68 | 33.84 |
| KXG38754 | Sorghum | plastid | 25.03 | 27.56 |
| Solyc06g051780.2.1 | Tomato | cytosol | 7.1 | 22.92 |
| Solyc11g044900.1.1 | Tomato | cytosol | 9.81 | 13.77 |
| Solyc09g091860.2.1 | Tomato | nucleus | 9.42 | 10.9 |
Protein Annotations
| Gene3D:1.10.1410.10 | MapMan:16.10.2.6.2 | Gene3D:3.30.460.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003729 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0016779 | GO:GO:0019538 |
| GO:GO:0040029 | GO:GO:0050265 | GO:GO:0060964 | GO:GO:0071076 | GO:GO:1903705 | UniProt:K4AZE1 |
| InterPro:PAP_assoc | PFAM:PF01909 | PFAM:PF03828 | PANTHER:PTHR12271 | PANTHER:PTHR12271:SF53 | InterPro:Polymerase_NTP_transf_dom |
| SUPFAM:SSF81301 | SUPFAM:SSF81631 | EnsemblPlantsGene:Solyc01g094000.2 | EnsemblPlants:Solyc01g094000.2.1 | UniParc:UPI00027685C3 | SEG:seg |
Description
UTP:RNA uridylyltransferase 1 [Source:Projected from Arabidopsis thaliana (AT2G45620) UniProtKB/Swiss-Prot;Acc:O64642]
Coordinates
chr1:-:85570599..85581303
Molecular Weight (calculated)
85959.2 Da
IEP (calculated)
6.937
GRAVY (calculated)
-0.521
Length
775 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGGGGDAAS PPLSSQSTPS NGGEFLLQLL QNHPHQLHSQ PQPPLRPELQ NLPHDPAVAA VGPSMPYPPL FHTPTNPSVL PYSHSPPLFV PHNFFIRGFL
101: QNPNSGHTTN PNYSSPPAPS GFSQYHHASP LGFGSVGENM GNLGIFGANA KASNSNNEFD HNLIFGSLRS HIQGNVSMMN DRFSDDLASK VGNFEQKNHE
201: SRLANVRMLN GVEGKLENVI GSGRKQLGNL RGLEQQNSGG GGGESESESG GLGWGRQFHS GTVRGVVPPP GFSSKPRSRD FEHNVDNEKN NFVELNHRGI
301: GLNHKYERES KHLSRNGKNY AIGSDDQRVF RRLDSPVPPA GSKLHSVLAS DVEDSTLELR GEDAESGEET VSVMRDVLGR SSAQGQSELD ELGEHVISSL
401: GLEDEPNERS DKKNHHASRD KDYRSDKRGA YILGQRMRML KRQIACRSDI NRMNGAFLAT FQSLIPPEEE RTKQKQLLAL LDGIVSKEWP NARLYVYGSC
501: ANSFGFSKSD IDICLAIEDA NIDKSEVLLK LADMLQSGNL QNVQALTRAR VPIVKLMDPE TGISCDICVN NVLAVVNTKL LRDYAQIDVR LRQLAFIVKH
601: WAKSRGVNET YQGTLSSYAY VLMCIHFLQQ RRPAILPCLQ GMEATYSVTV GNIECAYFDK VEKLYGFGSQ NGESLARLVW AFFSYWAYCH DYANDVISIR
701: SGSTVSKRAK DWTRRIGNDR HLICIEDPFE VSHDLGRVVD KFSIRVLREE FERAAEIMQY DPNPCVKLFE PYIPS
101: QNPNSGHTTN PNYSSPPAPS GFSQYHHASP LGFGSVGENM GNLGIFGANA KASNSNNEFD HNLIFGSLRS HIQGNVSMMN DRFSDDLASK VGNFEQKNHE
201: SRLANVRMLN GVEGKLENVI GSGRKQLGNL RGLEQQNSGG GGGESESESG GLGWGRQFHS GTVRGVVPPP GFSSKPRSRD FEHNVDNEKN NFVELNHRGI
301: GLNHKYERES KHLSRNGKNY AIGSDDQRVF RRLDSPVPPA GSKLHSVLAS DVEDSTLELR GEDAESGEET VSVMRDVLGR SSAQGQSELD ELGEHVISSL
401: GLEDEPNERS DKKNHHASRD KDYRSDKRGA YILGQRMRML KRQIACRSDI NRMNGAFLAT FQSLIPPEEE RTKQKQLLAL LDGIVSKEWP NARLYVYGSC
501: ANSFGFSKSD IDICLAIEDA NIDKSEVLLK LADMLQSGNL QNVQALTRAR VPIVKLMDPE TGISCDICVN NVLAVVNTKL LRDYAQIDVR LRQLAFIVKH
601: WAKSRGVNET YQGTLSSYAY VLMCIHFLQQ RRPAILPCLQ GMEATYSVTV GNIECAYFDK VEKLYGFGSQ NGESLARLVW AFFSYWAYCH DYANDVISIR
701: SGSTVSKRAK DWTRRIGNDR HLICIEDPFE VSHDLGRVVD KFSIRVLREE FERAAEIMQY DPNPCVKLFE PYIPS
001: MADGGAEPPA PPSSINAGEF LLSILHGSPS PSSQGPQHHQ SFALDPAIAA IGPTVNNPFP PSNWQSNGHR PSNHNPPSWP LAFSPPHNLS PNFLGFPQFP
101: PSPFTTNQFD GNQRVSPEDA YRLGFPGTTN PAIQSMVQQQ QQQQLPPPQS ETRKLVFGSF SGDATQSLNG LHNGNLKYDS NQHEQLMRHP QSTLSNSNMD
201: PNLSHHRNHD LHEQRGGHSG RGNWGHIGNN GRGLKSTPPP PPPGFSSNQR GWDMSLGSKD DDRGMGRNHD QAMGEHSKVW NQSVDFSAEA NRLRGLSIQN
301: ESKFNLSQQI DHPGPPKGAS LHSVSAADAA DSFSMLNKEA RRGGERREEL GQLSKAKREG NANSDEIEDF GEDIVKSLLL EDETGEKDAN DGKKDSKTSR
401: EKESRVDNRG QRLLGQKARM VKMYMACRND IHRYDATFIA IYKSLIPAEE ELEKQRQLMA HLENLVAKEW PHAKLYLYGS CANSFGFPKS DIDVCLAIEG
501: DDINKSEMLL KLAEILESDN LQNVQALTRA RVPIVKLMDP VTGISCDICI NNVLAVVNTK LLRDYAQIDV RLRQLAFIVK HWAKSRRVNE TYQGTLSSYA
601: YVLMCIHFLQ QRRPPILPCL QEMEPTYSVR VDNIRCTYFD NVDRLRNFGS NNRETIAELV WGFFNYWAYA HDYAYNVVSV RTGSILGKRE KDWTRRVGND
701: RHLICIEDPF ETSHDLGRVV DKFSIRVLRE EFERAARIMH QDPNPCAKLL EPYIPEDNNG QGHN
101: PSPFTTNQFD GNQRVSPEDA YRLGFPGTTN PAIQSMVQQQ QQQQLPPPQS ETRKLVFGSF SGDATQSLNG LHNGNLKYDS NQHEQLMRHP QSTLSNSNMD
201: PNLSHHRNHD LHEQRGGHSG RGNWGHIGNN GRGLKSTPPP PPPGFSSNQR GWDMSLGSKD DDRGMGRNHD QAMGEHSKVW NQSVDFSAEA NRLRGLSIQN
301: ESKFNLSQQI DHPGPPKGAS LHSVSAADAA DSFSMLNKEA RRGGERREEL GQLSKAKREG NANSDEIEDF GEDIVKSLLL EDETGEKDAN DGKKDSKTSR
401: EKESRVDNRG QRLLGQKARM VKMYMACRND IHRYDATFIA IYKSLIPAEE ELEKQRQLMA HLENLVAKEW PHAKLYLYGS CANSFGFPKS DIDVCLAIEG
501: DDINKSEMLL KLAEILESDN LQNVQALTRA RVPIVKLMDP VTGISCDICI NNVLAVVNTK LLRDYAQIDV RLRQLAFIVK HWAKSRRVNE TYQGTLSSYA
601: YVLMCIHFLQ QRRPPILPCL QEMEPTYSVR VDNIRCTYFD NVDRLRNFGS NNRETIAELV WGFFNYWAYA HDYAYNVVSV RTGSILGKRE KDWTRRVGND
701: RHLICIEDPF ETSHDLGRVV DKFSIRVLRE EFERAARIMH QDPNPCAKLL EPYIPEDNNG QGHN
Arabidopsis Description
URT1UTP:RNA uridylyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:O64642]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.