Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G133800.1 | Wheat | nucleus, plastid | 93.56 | 96.5 |
| TraesCS1A01G139400.1 | Wheat | nucleus | 93.33 | 96.26 |
| HORVU1Hr1G031950.1 | Barley | plastid | 85.71 | 84.82 |
| KXG32580 | Sorghum | cytosol | 22.72 | 83.26 |
| Os10t0188300-01 | Rice | cytosol, nucleus, plastid | 33.84 | 77.69 |
| GSMUA_Achr2P01000_001 | Banana | cytosol, mitochondrion, nucleus | 29.86 | 74.34 |
| GSMUA_Achr11P... | Banana | cytosol | 30.09 | 69.84 |
| TraesCS6B01G090200.1 | Wheat | cytosol | 17.45 | 67.42 |
| Zm00001d014321_P007 | Maize | plastid | 44.26 | 47.91 |
| KXG38754 | Sorghum | plastid | 36.18 | 43.89 |
| KRH48314 | Soybean | endoplasmic reticulum | 34.54 | 40.3 |
| KRH65203 | Soybean | nucleus | 33.61 | 39.26 |
| VIT_15s0048g01340.t01 | Wine grape | nucleus | 32.67 | 38.59 |
| Solyc01g094000.2.1 | Tomato | nucleus | 34.54 | 38.06 |
| CDY37053 | Canola | nucleus | 32.08 | 37.85 |
| CDY27369 | Canola | nucleus | 31.85 | 37.78 |
| PGSC0003DMT400000387 | Potato | plastid | 31.03 | 37.38 |
| AT2G45620.1 | Thale cress | nucleus | 32.55 | 36.39 |
| Bra039325.1-P | Field mustard | nucleus | 32.32 | 36.32 |
| TraesCS3B01G394900.1 | Wheat | cytosol | 8.08 | 14.23 |
| TraesCS4B01G003200.1 | Wheat | nucleus | 8.55 | 12.87 |
| TraesCS7B01G180400.1 | Wheat | cytosol | 7.96 | 12.08 |
| TraesCS3B01G394800.1 | Wheat | nucleus | 7.96 | 10.48 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G149800.1 | EnsemblPlantsGene:TraesCS1B01G149800 | Gene3D:1.10.1410.10 | Gene3D:3.30.460.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016740 | GO:GO:0016779 | InterPro:PAP_assoc | InterPro:Polymerase_NTP_transf_dom | PANTHER:PTHR12271 | PANTHER:PTHR12271:SF53 |
| PFAM:PF01909 | PFAM:PF03828 | SEG:seg | SUPFAM:SSF81301 | SUPFAM:SSF81631 | TIGR:cd05402 |
| MapMan:16.10.2.6.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1B:+:225785894..225813062
Molecular Weight (calculated)
95235.4 Da
IEP (calculated)
7.146
GRAVY (calculated)
-0.551
Length
854 amino acids
Sequence
(BLAST)
(BLAST)
001: MHAVEDALTT TQERHRGAPT PPPPFPMADA SSGGGGRAPR PSTSPSDPKL EHSASASLDG GLLLRLLQNS SPRPQHQQNP SQPLAKPNNF FVDPAVAAVG
101: PMFSSPPYVH VGGFAWRSSS SPQPQLGSSD PRIAQPLDPY AERGGGGFRS VDVVSRNRPE KPRSGAPPPG FGKPSPPKFA TAWHSATGRE VHDVFGAMQQ
201: NREQQREPNY HHPEGFGRTH NTEIQEMPTF TGGQGVLGRL PHEERNTSLI IGSHGPAAVM MYREQQQQQH DHILSRTPPD ANASANAHGI TERIPHGDQH
301: ILQFAGGRTL IGEHHIHPST GARIPHKGQR QQEPCLADIS QRDQRWQGHA SLNLSAGIVL EMLGKMPMKE KHQVTAPSSS SVDMDVRGDR GKKFLAESTG
401: LEVGFGEVGF ERGVHGRVVV DARNFKVSCQ NSEVRFAAKK EEEDADSKEE DSIIEQFMDT VVIEGNDEAK GMVVRNSGSR SKDFRSDSSR GHHVSSQRVR
501: FQRRVRACRY DIDQFTPNFL SIFDSLVPSE EEIAKQNQLV IALSRLINKE WPNSKLYLYG SCANSFGFSN SDIDLCLSID DKEMSKVDII LKLADILQAG
601: NLQNIQALTR ARVPIVKLMD LDTGLSCDIC VNNLLAVVNT KLLRDYAQID QRLRQLAFIV KHWAKSRRVN ETYQGTLSSY SYVIMCIHLL QLRRILPCLQ
701: EMEATCYVTV DDNHYAYFDQ VDKLSNYGAH NNETLSSLLW AFFHYWAYQH DYTQDVISIR TGKIISKHMK DWTRRVGNDR HLICIEDPFE TSHDLGRVVD
801: KFSIKILREE FERAANILQY DPNPSVKLFE PYVPRPPSGT LDEEGILSTA GAII
101: PMFSSPPYVH VGGFAWRSSS SPQPQLGSSD PRIAQPLDPY AERGGGGFRS VDVVSRNRPE KPRSGAPPPG FGKPSPPKFA TAWHSATGRE VHDVFGAMQQ
201: NREQQREPNY HHPEGFGRTH NTEIQEMPTF TGGQGVLGRL PHEERNTSLI IGSHGPAAVM MYREQQQQQH DHILSRTPPD ANASANAHGI TERIPHGDQH
301: ILQFAGGRTL IGEHHIHPST GARIPHKGQR QQEPCLADIS QRDQRWQGHA SLNLSAGIVL EMLGKMPMKE KHQVTAPSSS SVDMDVRGDR GKKFLAESTG
401: LEVGFGEVGF ERGVHGRVVV DARNFKVSCQ NSEVRFAAKK EEEDADSKEE DSIIEQFMDT VVIEGNDEAK GMVVRNSGSR SKDFRSDSSR GHHVSSQRVR
501: FQRRVRACRY DIDQFTPNFL SIFDSLVPSE EEIAKQNQLV IALSRLINKE WPNSKLYLYG SCANSFGFSN SDIDLCLSID DKEMSKVDII LKLADILQAG
601: NLQNIQALTR ARVPIVKLMD LDTGLSCDIC VNNLLAVVNT KLLRDYAQID QRLRQLAFIV KHWAKSRRVN ETYQGTLSSY SYVIMCIHLL QLRRILPCLQ
701: EMEATCYVTV DDNHYAYFDQ VDKLSNYGAH NNETLSSLLW AFFHYWAYQH DYTQDVISIR TGKIISKHMK DWTRRVGNDR HLICIEDPFE TSHDLGRVVD
801: KFSIKILREE FERAANILQY DPNPSVKLFE PYVPRPPSGT LDEEGILSTA GAII
001: MADGGAEPPA PPSSINAGEF LLSILHGSPS PSSQGPQHHQ SFALDPAIAA IGPTVNNPFP PSNWQSNGHR PSNHNPPSWP LAFSPPHNLS PNFLGFPQFP
101: PSPFTTNQFD GNQRVSPEDA YRLGFPGTTN PAIQSMVQQQ QQQQLPPPQS ETRKLVFGSF SGDATQSLNG LHNGNLKYDS NQHEQLMRHP QSTLSNSNMD
201: PNLSHHRNHD LHEQRGGHSG RGNWGHIGNN GRGLKSTPPP PPPGFSSNQR GWDMSLGSKD DDRGMGRNHD QAMGEHSKVW NQSVDFSAEA NRLRGLSIQN
301: ESKFNLSQQI DHPGPPKGAS LHSVSAADAA DSFSMLNKEA RRGGERREEL GQLSKAKREG NANSDEIEDF GEDIVKSLLL EDETGEKDAN DGKKDSKTSR
401: EKESRVDNRG QRLLGQKARM VKMYMACRND IHRYDATFIA IYKSLIPAEE ELEKQRQLMA HLENLVAKEW PHAKLYLYGS CANSFGFPKS DIDVCLAIEG
501: DDINKSEMLL KLAEILESDN LQNVQALTRA RVPIVKLMDP VTGISCDICI NNVLAVVNTK LLRDYAQIDV RLRQLAFIVK HWAKSRRVNE TYQGTLSSYA
601: YVLMCIHFLQ QRRPPILPCL QEMEPTYSVR VDNIRCTYFD NVDRLRNFGS NNRETIAELV WGFFNYWAYA HDYAYNVVSV RTGSILGKRE KDWTRRVGND
701: RHLICIEDPF ETSHDLGRVV DKFSIRVLRE EFERAARIMH QDPNPCAKLL EPYIPEDNNG QGHN
101: PSPFTTNQFD GNQRVSPEDA YRLGFPGTTN PAIQSMVQQQ QQQQLPPPQS ETRKLVFGSF SGDATQSLNG LHNGNLKYDS NQHEQLMRHP QSTLSNSNMD
201: PNLSHHRNHD LHEQRGGHSG RGNWGHIGNN GRGLKSTPPP PPPGFSSNQR GWDMSLGSKD DDRGMGRNHD QAMGEHSKVW NQSVDFSAEA NRLRGLSIQN
301: ESKFNLSQQI DHPGPPKGAS LHSVSAADAA DSFSMLNKEA RRGGERREEL GQLSKAKREG NANSDEIEDF GEDIVKSLLL EDETGEKDAN DGKKDSKTSR
401: EKESRVDNRG QRLLGQKARM VKMYMACRND IHRYDATFIA IYKSLIPAEE ELEKQRQLMA HLENLVAKEW PHAKLYLYGS CANSFGFPKS DIDVCLAIEG
501: DDINKSEMLL KLAEILESDN LQNVQALTRA RVPIVKLMDP VTGISCDICI NNVLAVVNTK LLRDYAQIDV RLRQLAFIVK HWAKSRRVNE TYQGTLSSYA
601: YVLMCIHFLQ QRRPPILPCL QEMEPTYSVR VDNIRCTYFD NVDRLRNFGS NNRETIAELV WGFFNYWAYA HDYAYNVVSV RTGSILGKRE KDWTRRVGND
701: RHLICIEDPF ETSHDLGRVV DKFSIRVLRE EFERAARIMH QDPNPCAKLL EPYIPEDNNG QGHN
Arabidopsis Description
URT1UTP:RNA uridylyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:O64642]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.