Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH48314 | Soybean | endoplasmic reticulum | 76.33 | 76.23 |
| GSMUA_Achr2P01000_001 | Banana | cytosol, mitochondrion, nucleus | 34.61 | 73.76 |
| KXG32580 | Sorghum | cytosol | 22.98 | 72.1 |
| TraesCS6B01G090200.1 | Wheat | cytosol | 20.66 | 68.33 |
| GSMUA_Achr11P... | Banana | cytosol | 34.06 | 67.66 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus | 30.78 | 65.6 |
| Os10t0188300-01 | Rice | cytosol, nucleus, plastid | 33.24 | 65.32 |
| Os02t0122100-00 | Rice | cytosol | 29.82 | 59.4 |
| HORVU6Hr1G012060.3 | Barley | cytosol, nucleus | 31.46 | 53.61 |
| VIT_15s0048g01340.t01 | Wine grape | nucleus | 46.37 | 46.89 |
| CDY27369 | Canola | nucleus | 43.91 | 44.58 |
| CDY37053 | Canola | nucleus | 43.5 | 43.92 |
| PGSC0003DMT400000387 | Potato | plastid | 42.0 | 43.3 |
| Solyc01g094000.2.1 | Tomato | nucleus | 44.6 | 42.06 |
| Bra039325.1-P | Field mustard | nucleus | 43.5 | 41.84 |
| AT2G45620.1 | Thale cress | nucleus | 42.68 | 40.84 |
| TraesCSU01G117200.1 | Wheat | cytosol | 31.87 | 39.63 |
| TraesCS6A01G067000.1 | Wheat | cytosol | 31.87 | 39.49 |
| OQU84248 | Sorghum | nucleus | 33.65 | 38.02 |
| Zm00001d015059_P001 | Maize | nucleus | 30.92 | 37.23 |
| Zm00001d014321_P007 | Maize | plastid | 39.4 | 36.5 |
| TraesCS1D01G133800.1 | Wheat | nucleus, plastid | 39.53 | 34.9 |
| TraesCS1A01G139400.1 | Wheat | nucleus | 39.26 | 34.66 |
| TraesCS1B01G149800.1 | Wheat | nucleus | 39.26 | 33.61 |
| HORVU1Hr1G031950.1 | Barley | plastid | 38.58 | 32.68 |
| KXG38754 | Sorghum | plastid | 28.04 | 29.12 |
| KRH53978 | Soybean | cytosol | 10.81 | 21.01 |
| KRG97851 | Soybean | cytosol | 8.89 | 15.66 |
| KRH31028 | Soybean | cytosol | 9.17 | 14.73 |
Protein Annotations
| EMBL:ACUP02001316 | EnsemblPlants:KRH65203 | EnsemblPlantsGene:GLYMA_03G020100 | EntrezGene:100818029 | Gene3D:1.10.1410.10 | Gene3D:3.30.460.10 |
| InterPro:PAP_assoc | PANTHER:PTHR12271 | PANTHER:PTHR12271:SF53 | PFAM:PF03828 | ProteinID:KRH65203 | ProteinID:KRH65203.1 |
| SEG:seg | SUPFAM:SSF81301 | SUPFAM:SSF81631 | UniParc:UPI00023397AB | UniProt:I1JKI3 | MapMan:16.10.2.6.2 |
Description
hypothetical protein
Coordinates
chr3:-:2057797..2063029
Molecular Weight (calculated)
81755.1 Da
IEP (calculated)
7.517
GRAVY (calculated)
-0.538
Length
731 amino acids
Sequence
(BLAST)
(BLAST)
001: MNGGGGDLPP SNGGEFLLSL IQQRPHHPHP PPQSPAIDPA VTAIGPMIPV ALPPWQIAGG DQPHHHQHTH PHHLPPPPPW SHTLSSSSPL YPPNFFGLPH
101: NPFPPPRNHF PVTVTPNSVT NGVNANVNLA HDLRKLGFPI EESHHNNNNN NNVVDGFVHH HHQQQQQQQH ELKLQFGSLP TVAYAAAEVS SNGDSLLNLK
201: FNRGGNVVHP TSNSSGNVVL QGNHDAVERE RRGLGGYMAG GSLPPETSRV APGFGNRIRG KGLEGRNENL YGRREGGRMV SGERSNVGLV DQLDRPGPPA
301: RSHLHSGSGN ETSGIGEVGG RDSKHKGGGR LRMEGFPESG GRVADVDVLG EQLADSLLVE DESDDRTNLR QRRREKDVRF LDSRGQQIMS QRGRMYRRQM
401: MCRRDIDDFN VPFLAIYGSL IPPEEEKLKQ KQLVAILEKL VSKEWPTSNL YLYGSCANSF GVSKSDIDVC LAIEEADMEK SKIIMKLADI LQSDNLQNVQ
501: ALTRARVPIV KLMDPVTGIS CDICINNLLA VVNTKLLRDY AHIDPRLRQL AFIIKHWAKS RRVNETYHGT LSSYAYVLMC IHFLQMRRPA ILPCLQEMET
601: TYSVTVDDVH CAYFDQVEKL CDFGRHNKES IAQLVRGFFH YWAYCHDYAN TVISVRTGSI ISKREKDWTR RIGNDRHLIC IEDPFEISHD LGRVVDKHSI
701: KVLREEFERA AEVMQNDPNP CIKLFEPYVP S
101: NPFPPPRNHF PVTVTPNSVT NGVNANVNLA HDLRKLGFPI EESHHNNNNN NNVVDGFVHH HHQQQQQQQH ELKLQFGSLP TVAYAAAEVS SNGDSLLNLK
201: FNRGGNVVHP TSNSSGNVVL QGNHDAVERE RRGLGGYMAG GSLPPETSRV APGFGNRIRG KGLEGRNENL YGRREGGRMV SGERSNVGLV DQLDRPGPPA
301: RSHLHSGSGN ETSGIGEVGG RDSKHKGGGR LRMEGFPESG GRVADVDVLG EQLADSLLVE DESDDRTNLR QRRREKDVRF LDSRGQQIMS QRGRMYRRQM
401: MCRRDIDDFN VPFLAIYGSL IPPEEEKLKQ KQLVAILEKL VSKEWPTSNL YLYGSCANSF GVSKSDIDVC LAIEEADMEK SKIIMKLADI LQSDNLQNVQ
501: ALTRARVPIV KLMDPVTGIS CDICINNLLA VVNTKLLRDY AHIDPRLRQL AFIIKHWAKS RRVNETYHGT LSSYAYVLMC IHFLQMRRPA ILPCLQEMET
601: TYSVTVDDVH CAYFDQVEKL CDFGRHNKES IAQLVRGFFH YWAYCHDYAN TVISVRTGSI ISKREKDWTR RIGNDRHLIC IEDPFEISHD LGRVVDKHSI
701: KVLREEFERA AEVMQNDPNP CIKLFEPYVP S
001: MADGGAEPPA PPSSINAGEF LLSILHGSPS PSSQGPQHHQ SFALDPAIAA IGPTVNNPFP PSNWQSNGHR PSNHNPPSWP LAFSPPHNLS PNFLGFPQFP
101: PSPFTTNQFD GNQRVSPEDA YRLGFPGTTN PAIQSMVQQQ QQQQLPPPQS ETRKLVFGSF SGDATQSLNG LHNGNLKYDS NQHEQLMRHP QSTLSNSNMD
201: PNLSHHRNHD LHEQRGGHSG RGNWGHIGNN GRGLKSTPPP PPPGFSSNQR GWDMSLGSKD DDRGMGRNHD QAMGEHSKVW NQSVDFSAEA NRLRGLSIQN
301: ESKFNLSQQI DHPGPPKGAS LHSVSAADAA DSFSMLNKEA RRGGERREEL GQLSKAKREG NANSDEIEDF GEDIVKSLLL EDETGEKDAN DGKKDSKTSR
401: EKESRVDNRG QRLLGQKARM VKMYMACRND IHRYDATFIA IYKSLIPAEE ELEKQRQLMA HLENLVAKEW PHAKLYLYGS CANSFGFPKS DIDVCLAIEG
501: DDINKSEMLL KLAEILESDN LQNVQALTRA RVPIVKLMDP VTGISCDICI NNVLAVVNTK LLRDYAQIDV RLRQLAFIVK HWAKSRRVNE TYQGTLSSYA
601: YVLMCIHFLQ QRRPPILPCL QEMEPTYSVR VDNIRCTYFD NVDRLRNFGS NNRETIAELV WGFFNYWAYA HDYAYNVVSV RTGSILGKRE KDWTRRVGND
701: RHLICIEDPF ETSHDLGRVV DKFSIRVLRE EFERAARIMH QDPNPCAKLL EPYIPEDNNG QGHN
101: PSPFTTNQFD GNQRVSPEDA YRLGFPGTTN PAIQSMVQQQ QQQQLPPPQS ETRKLVFGSF SGDATQSLNG LHNGNLKYDS NQHEQLMRHP QSTLSNSNMD
201: PNLSHHRNHD LHEQRGGHSG RGNWGHIGNN GRGLKSTPPP PPPGFSSNQR GWDMSLGSKD DDRGMGRNHD QAMGEHSKVW NQSVDFSAEA NRLRGLSIQN
301: ESKFNLSQQI DHPGPPKGAS LHSVSAADAA DSFSMLNKEA RRGGERREEL GQLSKAKREG NANSDEIEDF GEDIVKSLLL EDETGEKDAN DGKKDSKTSR
401: EKESRVDNRG QRLLGQKARM VKMYMACRND IHRYDATFIA IYKSLIPAEE ELEKQRQLMA HLENLVAKEW PHAKLYLYGS CANSFGFPKS DIDVCLAIEG
501: DDINKSEMLL KLAEILESDN LQNVQALTRA RVPIVKLMDP VTGISCDICI NNVLAVVNTK LLRDYAQIDV RLRQLAFIVK HWAKSRRVNE TYQGTLSSYA
601: YVLMCIHFLQ QRRPPILPCL QEMEPTYSVR VDNIRCTYFD NVDRLRNFGS NNRETIAELV WGFFNYWAYA HDYAYNVVSV RTGSILGKRE KDWTRRVGND
701: RHLICIEDPF ETSHDLGRVV DKFSIRVLRE EFERAARIMH QDPNPCAKLL EPYIPEDNNG QGHN
Arabidopsis Description
URT1UTP:RNA uridylyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:O64642]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.