Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS6B01G090200.1 | Wheat | cytosol | 36.22 | 96.38 |
TraesCS6A01G067000.1 | Wheat | cytosol | 92.69 | 92.37 |
HORVU6Hr1G012060.3 | Barley | cytosol, nucleus | 60.54 | 82.98 |
Os02t0122100-00 | Rice | cytosol | 46.43 | 74.39 |
GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus | 35.88 | 61.52 |
Zm00001d015059_P001 | Maize | nucleus | 53.4 | 51.73 |
OQU84248 | Sorghum | nucleus | 53.06 | 48.22 |
VIT_15s0048g01340.t01 | Wine grape | nucleus | 43.03 | 34.99 |
KRH48314 | Soybean | endoplasmic reticulum | 40.31 | 32.38 |
CDY27369 | Canola | nucleus | 39.63 | 32.36 |
KRH65203 | Soybean | nucleus | 39.63 | 31.87 |
CDY37053 | Canola | nucleus | 38.95 | 31.63 |
PGSC0003DMT400000387 | Potato | plastid | 37.76 | 31.31 |
Solyc01g094000.2.1 | Tomato | nucleus | 41.16 | 31.23 |
Bra039325.1-P | Field mustard | nucleus | 39.8 | 30.79 |
AT2G45620.1 | Thale cress | nucleus | 38.95 | 29.97 |
Protein Annotations
Gene3D:1.10.1410.10 | MapMan:16.10.2.6.2 | Gene3D:3.30.460.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
GO:GO:0003729 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006412 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0016779 | GO:GO:0019538 |
GO:GO:0040029 | GO:GO:0050265 | GO:GO:0060964 | GO:GO:0071076 | GO:GO:1903705 | InterPro:PAP_assoc |
PFAM:PF01909 | PFAM:PF03828 | PANTHER:PTHR12271 | PANTHER:PTHR12271:SF53 | InterPro:Polymerase_NTP_transf_dom | SUPFAM:SSF81301 |
SUPFAM:SSF81631 | EnsemblPlantsGene:TraesCSU01G117200 | EnsemblPlants:TraesCSU01G117200.1 | TIGR:cd05402 | SEG:seg | : |
Description
No Description!
Coordinates
chrUn:+:100836466..100839253
Molecular Weight (calculated)
64586.2 Da
IEP (calculated)
5.760
GRAVY (calculated)
-0.453
Length
588 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGDAKPLA GGAFLRFLLP SPKPEPTHPA PARLAPPHCL VAPPQPDPPP GALPDERLFI VAPTRPAWLP PQPRPPFPVP PARRVHPAAG AARNAGRFAA
101: GRGGQARRRA GDFAGNRARA GPDRRKAGGG LAVKESGGED RAGARLAAAA ARREKRVWVA VERKGASGGS DADDQAAVGG GYAGGDEAGG SVEGEEQLEP
201: DDGDGRRLGE ELEDSLLIAG DQECHDSDGG QQSSENTMSQ SNQSRRLQIR THTGWMECRH DIGTFASSLL SIYESLKPSE EHMSKQSRLI DSLTKSVTKE
301: WPNAQLHLYG SCANSFGTSH SDVDVCLEIE IGTGSEVELL LRLAEILRGD NFDSVEAITS ARVPIVRMLD AGSDFSCDIC INNLLAVANT KLLKDYAQID
401: GRLLQLASIV KHWAKLRGVN ETYRGTLSSY AYVLMCISFL QLREPKILPC LQAMEPTYTM VVDDTECAYF DEVHQLRDFG AENKETIAEL LWAFFHYWAF
501: QHDYRKDVIS IRMGKIISKK EKNWTTRIGN DRHLICIEDP FETGHDLGRI VDRQTIRIIR EEFERAAAML QHDDDPCVTL FEPYNYEN
101: GRGGQARRRA GDFAGNRARA GPDRRKAGGG LAVKESGGED RAGARLAAAA ARREKRVWVA VERKGASGGS DADDQAAVGG GYAGGDEAGG SVEGEEQLEP
201: DDGDGRRLGE ELEDSLLIAG DQECHDSDGG QQSSENTMSQ SNQSRRLQIR THTGWMECRH DIGTFASSLL SIYESLKPSE EHMSKQSRLI DSLTKSVTKE
301: WPNAQLHLYG SCANSFGTSH SDVDVCLEIE IGTGSEVELL LRLAEILRGD NFDSVEAITS ARVPIVRMLD AGSDFSCDIC INNLLAVANT KLLKDYAQID
401: GRLLQLASIV KHWAKLRGVN ETYRGTLSSY AYVLMCISFL QLREPKILPC LQAMEPTYTM VVDDTECAYF DEVHQLRDFG AENKETIAEL LWAFFHYWAF
501: QHDYRKDVIS IRMGKIISKK EKNWTTRIGN DRHLICIEDP FETGHDLGRI VDRQTIRIIR EEFERAAAML QHDDDPCVTL FEPYNYEN
001: MADGGAEPPA PPSSINAGEF LLSILHGSPS PSSQGPQHHQ SFALDPAIAA IGPTVNNPFP PSNWQSNGHR PSNHNPPSWP LAFSPPHNLS PNFLGFPQFP
101: PSPFTTNQFD GNQRVSPEDA YRLGFPGTTN PAIQSMVQQQ QQQQLPPPQS ETRKLVFGSF SGDATQSLNG LHNGNLKYDS NQHEQLMRHP QSTLSNSNMD
201: PNLSHHRNHD LHEQRGGHSG RGNWGHIGNN GRGLKSTPPP PPPGFSSNQR GWDMSLGSKD DDRGMGRNHD QAMGEHSKVW NQSVDFSAEA NRLRGLSIQN
301: ESKFNLSQQI DHPGPPKGAS LHSVSAADAA DSFSMLNKEA RRGGERREEL GQLSKAKREG NANSDEIEDF GEDIVKSLLL EDETGEKDAN DGKKDSKTSR
401: EKESRVDNRG QRLLGQKARM VKMYMACRND IHRYDATFIA IYKSLIPAEE ELEKQRQLMA HLENLVAKEW PHAKLYLYGS CANSFGFPKS DIDVCLAIEG
501: DDINKSEMLL KLAEILESDN LQNVQALTRA RVPIVKLMDP VTGISCDICI NNVLAVVNTK LLRDYAQIDV RLRQLAFIVK HWAKSRRVNE TYQGTLSSYA
601: YVLMCIHFLQ QRRPPILPCL QEMEPTYSVR VDNIRCTYFD NVDRLRNFGS NNRETIAELV WGFFNYWAYA HDYAYNVVSV RTGSILGKRE KDWTRRVGND
701: RHLICIEDPF ETSHDLGRVV DKFSIRVLRE EFERAARIMH QDPNPCAKLL EPYIPEDNNG QGHN
101: PSPFTTNQFD GNQRVSPEDA YRLGFPGTTN PAIQSMVQQQ QQQQLPPPQS ETRKLVFGSF SGDATQSLNG LHNGNLKYDS NQHEQLMRHP QSTLSNSNMD
201: PNLSHHRNHD LHEQRGGHSG RGNWGHIGNN GRGLKSTPPP PPPGFSSNQR GWDMSLGSKD DDRGMGRNHD QAMGEHSKVW NQSVDFSAEA NRLRGLSIQN
301: ESKFNLSQQI DHPGPPKGAS LHSVSAADAA DSFSMLNKEA RRGGERREEL GQLSKAKREG NANSDEIEDF GEDIVKSLLL EDETGEKDAN DGKKDSKTSR
401: EKESRVDNRG QRLLGQKARM VKMYMACRND IHRYDATFIA IYKSLIPAEE ELEKQRQLMA HLENLVAKEW PHAKLYLYGS CANSFGFPKS DIDVCLAIEG
501: DDINKSEMLL KLAEILESDN LQNVQALTRA RVPIVKLMDP VTGISCDICI NNVLAVVNTK LLRDYAQIDV RLRQLAFIVK HWAKSRRVNE TYQGTLSSYA
601: YVLMCIHFLQ QRRPPILPCL QEMEPTYSVR VDNIRCTYFD NVDRLRNFGS NNRETIAELV WGFFNYWAYA HDYAYNVVSV RTGSILGKRE KDWTRRVGND
701: RHLICIEDPF ETSHDLGRVV DKFSIRVLRE EFERAARIMH QDPNPCAKLL EPYIPEDNNG QGHN
Arabidopsis Description
URT1UTP:RNA uridylyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:O64642]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.