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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 2
  • mitochondrion 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G090200.1 Wheat cytosol 36.22 96.38
TraesCS6A01G067000.1 Wheat cytosol 92.69 92.37
HORVU6Hr1G012060.3 Barley cytosol, nucleus 60.54 82.98
Os02t0122100-00 Rice cytosol 46.43 74.39
GSMUA_AchrUn_... Banana cytosol, mitochondrion, nucleus 35.88 61.52
Zm00001d015059_P001 Maize nucleus 53.4 51.73
OQU84248 Sorghum nucleus 53.06 48.22
VIT_15s0048g01340.t01 Wine grape nucleus 43.03 34.99
KRH48314 Soybean endoplasmic reticulum 40.31 32.38
CDY27369 Canola nucleus 39.63 32.36
KRH65203 Soybean nucleus 39.63 31.87
CDY37053 Canola nucleus 38.95 31.63
PGSC0003DMT400000387 Potato plastid 37.76 31.31
Solyc01g094000.2.1 Tomato nucleus 41.16 31.23
Bra039325.1-P Field mustard nucleus 39.8 30.79
AT2G45620.1 Thale cress nucleus 38.95 29.97
Protein Annotations
Gene3D:1.10.1410.10MapMan:16.10.2.6.2Gene3D:3.30.460.10GO:GO:0003674GO:GO:0003676GO:GO:0003723
GO:GO:0003729GO:GO:0003824GO:GO:0005488GO:GO:0006139GO:GO:0006412GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016740GO:GO:0016779GO:GO:0019538
GO:GO:0040029GO:GO:0050265GO:GO:0060964GO:GO:0071076GO:GO:1903705InterPro:PAP_assoc
PFAM:PF01909PFAM:PF03828PANTHER:PTHR12271PANTHER:PTHR12271:SF53InterPro:Polymerase_NTP_transf_domSUPFAM:SSF81301
SUPFAM:SSF81631EnsemblPlantsGene:TraesCSU01G117200EnsemblPlants:TraesCSU01G117200.1TIGR:cd05402SEG:seg:
Description
No Description!
Coordinates
chrUn:+:100836466..100839253
Molecular Weight (calculated)
64586.2 Da
IEP (calculated)
5.760
GRAVY (calculated)
-0.453
Length
588 amino acids
Sequence
(BLAST)
001: MAGGDAKPLA GGAFLRFLLP SPKPEPTHPA PARLAPPHCL VAPPQPDPPP GALPDERLFI VAPTRPAWLP PQPRPPFPVP PARRVHPAAG AARNAGRFAA
101: GRGGQARRRA GDFAGNRARA GPDRRKAGGG LAVKESGGED RAGARLAAAA ARREKRVWVA VERKGASGGS DADDQAAVGG GYAGGDEAGG SVEGEEQLEP
201: DDGDGRRLGE ELEDSLLIAG DQECHDSDGG QQSSENTMSQ SNQSRRLQIR THTGWMECRH DIGTFASSLL SIYESLKPSE EHMSKQSRLI DSLTKSVTKE
301: WPNAQLHLYG SCANSFGTSH SDVDVCLEIE IGTGSEVELL LRLAEILRGD NFDSVEAITS ARVPIVRMLD AGSDFSCDIC INNLLAVANT KLLKDYAQID
401: GRLLQLASIV KHWAKLRGVN ETYRGTLSSY AYVLMCISFL QLREPKILPC LQAMEPTYTM VVDDTECAYF DEVHQLRDFG AENKETIAEL LWAFFHYWAF
501: QHDYRKDVIS IRMGKIISKK EKNWTTRIGN DRHLICIEDP FETGHDLGRI VDRQTIRIIR EEFERAAAML QHDDDPCVTL FEPYNYEN
Best Arabidopsis Sequence Match ( AT2G45620.1 )
(BLAST)
001: MADGGAEPPA PPSSINAGEF LLSILHGSPS PSSQGPQHHQ SFALDPAIAA IGPTVNNPFP PSNWQSNGHR PSNHNPPSWP LAFSPPHNLS PNFLGFPQFP
101: PSPFTTNQFD GNQRVSPEDA YRLGFPGTTN PAIQSMVQQQ QQQQLPPPQS ETRKLVFGSF SGDATQSLNG LHNGNLKYDS NQHEQLMRHP QSTLSNSNMD
201: PNLSHHRNHD LHEQRGGHSG RGNWGHIGNN GRGLKSTPPP PPPGFSSNQR GWDMSLGSKD DDRGMGRNHD QAMGEHSKVW NQSVDFSAEA NRLRGLSIQN
301: ESKFNLSQQI DHPGPPKGAS LHSVSAADAA DSFSMLNKEA RRGGERREEL GQLSKAKREG NANSDEIEDF GEDIVKSLLL EDETGEKDAN DGKKDSKTSR
401: EKESRVDNRG QRLLGQKARM VKMYMACRND IHRYDATFIA IYKSLIPAEE ELEKQRQLMA HLENLVAKEW PHAKLYLYGS CANSFGFPKS DIDVCLAIEG
501: DDINKSEMLL KLAEILESDN LQNVQALTRA RVPIVKLMDP VTGISCDICI NNVLAVVNTK LLRDYAQIDV RLRQLAFIVK HWAKSRRVNE TYQGTLSSYA
601: YVLMCIHFLQ QRRPPILPCL QEMEPTYSVR VDNIRCTYFD NVDRLRNFGS NNRETIAELV WGFFNYWAYA HDYAYNVVSV RTGSILGKRE KDWTRRVGND
701: RHLICIEDPF ETSHDLGRVV DKFSIRVLRE EFERAARIMH QDPNPCAKLL EPYIPEDNNG QGHN
Arabidopsis Description
URT1UTP:RNA uridylyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:O64642]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.