Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS6B01G090200.1 | Wheat | cytosol | 27.36 | 80.09 |
Os02t0122100-00 | Rice | cytosol | 41.27 | 72.75 |
KXG32580 | Sorghum | cytosol | 22.72 | 63.09 |
Zm00001d015059_P001 | Maize | nucleus | 58.73 | 62.6 |
GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus | 33.08 | 62.39 |
HORVU6Hr1G012060.3 | Barley | cytosol, nucleus | 41.27 | 62.24 |
TraesCSU01G117200.1 | Wheat | cytosol | 48.22 | 53.06 |
TraesCS6A01G067000.1 | Wheat | cytosol | 46.68 | 51.19 |
VIT_15s0048g01340.t01 | Wine grape | nucleus | 38.02 | 34.02 |
KRH65203 | Soybean | nucleus | 38.02 | 33.65 |
PGSC0003DMT400000387 | Potato | plastid | 36.32 | 33.15 |
KRH48314 | Soybean | endoplasmic reticulum | 36.94 | 32.65 |
CDY27369 | Canola | nucleus | 35.24 | 31.67 |
CDY37053 | Canola | nucleus | 35.24 | 31.49 |
Solyc01g094000.2.1 | Tomato | nucleus | 37.25 | 31.1 |
AT2G45620.1 | Thale cress | nucleus | 35.39 | 29.97 |
Bra039325.1-P | Field mustard | nucleus | 34.62 | 29.47 |
KXG38754 | Sorghum | plastid | 25.04 | 23.01 |
OQU89042 | Sorghum | cytosol | 11.9 | 15.46 |
OQU87849 | Sorghum | cytosol | 10.97 | 14.0 |
KXG33685 | Sorghum | nucleus | 10.36 | 11.09 |
OQU80706 | Sorghum | nucleus | 11.59 | 10.87 |
Protein Annotations
Gene3D:1.10.1410.10 | MapMan:16.10.2.6.2 | Gene3D:3.30.460.10 | EntrezGene:8068263 | UniProt:A0A1Z5RKJ6 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0016740 | GO:GO:0016779 | EnsemblPlants:OQU84248 | ProteinID:OQU84248 | ProteinID:OQU84248.1 |
InterPro:PAP_assoc | PFAM:PF01909 | PFAM:PF03828 | PANTHER:PTHR12271 | PANTHER:PTHR12271:SF53 | InterPro:Polymerase_NTP_transf_dom |
EnsemblPlantsGene:SORBI_3004G019700 | SUPFAM:SSF81301 | SUPFAM:SSF81631 | UniParc:UPI0001A8528D | RefSeq:XP_002451420.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr4:+:1567080..1570659
Molecular Weight (calculated)
71784.6 Da
IEP (calculated)
6.554
GRAVY (calculated)
-0.628
Length
647 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGDDAQDH AATEDPPQRA PDPFLRFLIP APKPRRAAPT ALLQPPHRLI APPELVMRPE ERLFIVPPTR PDWLPPPPRS YQHSPSSSSS TGAVARPRPP
101: VPPPPPPPSP SRRYHSSSPS PRPRPRPPFP PPTNDPWARN AGRFARQFAG VHVNGNARRG RSPVVPLPHD GGARFLPVPL PHDVGFQRPK AAAAAPHKEK
201: EKKAWVAVQR KAESGARDED RAAALSEGYS GGDEGSVEAE DVLQPQGKGE QQEDDDANRR LLLIDQQDDD VESSLPTDGT LDCSGRAGGG DRPSEVTPGP
301: DQVPRLQGRM RRPEAECRHD IDTFTPGLLA LYESLKPSEE HRSKQKQLVD SLAKSVSKEW PNAQMHLYGS CANSFGTSHS DVDVCLEMET GTQDAIEVLV
401: KLADVLRTDG FENVEAITSA RVPIVRMSDP GSGFSCDICI NNLLAVANTK LLKDYAQIDQ RLLQLAFLVK HWAKQRGVNE TYRGTLSSYA YVLMCINFLQ
501: QCEPKILPCL QAMEPTYKLT VDGTECAYFD KVDQLQGFGA DNKASVAELL WGFFHYWASQ HHYKRDVISV RLGKTISKQE KRWTTRVGND RHLVCIEDPF
601: EVSHDLGRVV DRQTIRILRE EMERAAVVLQ HDDDPCVTLF EPYGCEN
101: VPPPPPPPSP SRRYHSSSPS PRPRPRPPFP PPTNDPWARN AGRFARQFAG VHVNGNARRG RSPVVPLPHD GGARFLPVPL PHDVGFQRPK AAAAAPHKEK
201: EKKAWVAVQR KAESGARDED RAAALSEGYS GGDEGSVEAE DVLQPQGKGE QQEDDDANRR LLLIDQQDDD VESSLPTDGT LDCSGRAGGG DRPSEVTPGP
301: DQVPRLQGRM RRPEAECRHD IDTFTPGLLA LYESLKPSEE HRSKQKQLVD SLAKSVSKEW PNAQMHLYGS CANSFGTSHS DVDVCLEMET GTQDAIEVLV
401: KLADVLRTDG FENVEAITSA RVPIVRMSDP GSGFSCDICI NNLLAVANTK LLKDYAQIDQ RLLQLAFLVK HWAKQRGVNE TYRGTLSSYA YVLMCINFLQ
501: QCEPKILPCL QAMEPTYKLT VDGTECAYFD KVDQLQGFGA DNKASVAELL WGFFHYWASQ HHYKRDVISV RLGKTISKQE KRWTTRVGND RHLVCIEDPF
601: EVSHDLGRVV DRQTIRILRE EMERAAVVLQ HDDDPCVTLF EPYGCEN
001: MADGGAEPPA PPSSINAGEF LLSILHGSPS PSSQGPQHHQ SFALDPAIAA IGPTVNNPFP PSNWQSNGHR PSNHNPPSWP LAFSPPHNLS PNFLGFPQFP
101: PSPFTTNQFD GNQRVSPEDA YRLGFPGTTN PAIQSMVQQQ QQQQLPPPQS ETRKLVFGSF SGDATQSLNG LHNGNLKYDS NQHEQLMRHP QSTLSNSNMD
201: PNLSHHRNHD LHEQRGGHSG RGNWGHIGNN GRGLKSTPPP PPPGFSSNQR GWDMSLGSKD DDRGMGRNHD QAMGEHSKVW NQSVDFSAEA NRLRGLSIQN
301: ESKFNLSQQI DHPGPPKGAS LHSVSAADAA DSFSMLNKEA RRGGERREEL GQLSKAKREG NANSDEIEDF GEDIVKSLLL EDETGEKDAN DGKKDSKTSR
401: EKESRVDNRG QRLLGQKARM VKMYMACRND IHRYDATFIA IYKSLIPAEE ELEKQRQLMA HLENLVAKEW PHAKLYLYGS CANSFGFPKS DIDVCLAIEG
501: DDINKSEMLL KLAEILESDN LQNVQALTRA RVPIVKLMDP VTGISCDICI NNVLAVVNTK LLRDYAQIDV RLRQLAFIVK HWAKSRRVNE TYQGTLSSYA
601: YVLMCIHFLQ QRRPPILPCL QEMEPTYSVR VDNIRCTYFD NVDRLRNFGS NNRETIAELV WGFFNYWAYA HDYAYNVVSV RTGSILGKRE KDWTRRVGND
701: RHLICIEDPF ETSHDLGRVV DKFSIRVLRE EFERAARIMH QDPNPCAKLL EPYIPEDNNG QGHN
101: PSPFTTNQFD GNQRVSPEDA YRLGFPGTTN PAIQSMVQQQ QQQQLPPPQS ETRKLVFGSF SGDATQSLNG LHNGNLKYDS NQHEQLMRHP QSTLSNSNMD
201: PNLSHHRNHD LHEQRGGHSG RGNWGHIGNN GRGLKSTPPP PPPGFSSNQR GWDMSLGSKD DDRGMGRNHD QAMGEHSKVW NQSVDFSAEA NRLRGLSIQN
301: ESKFNLSQQI DHPGPPKGAS LHSVSAADAA DSFSMLNKEA RRGGERREEL GQLSKAKREG NANSDEIEDF GEDIVKSLLL EDETGEKDAN DGKKDSKTSR
401: EKESRVDNRG QRLLGQKARM VKMYMACRND IHRYDATFIA IYKSLIPAEE ELEKQRQLMA HLENLVAKEW PHAKLYLYGS CANSFGFPKS DIDVCLAIEG
501: DDINKSEMLL KLAEILESDN LQNVQALTRA RVPIVKLMDP VTGISCDICI NNVLAVVNTK LLRDYAQIDV RLRQLAFIVK HWAKSRRVNE TYQGTLSSYA
601: YVLMCIHFLQ QRRPPILPCL QEMEPTYSVR VDNIRCTYFD NVDRLRNFGS NNRETIAELV WGFFNYWAYA HDYAYNVVSV RTGSILGKRE KDWTRRVGND
701: RHLICIEDPF ETSHDLGRVV DKFSIRVLRE EFERAARIMH QDPNPCAKLL EPYIPEDNNG QGHN
Arabidopsis Description
URT1UTP:RNA uridylyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:O64642]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.