CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES07899
EES10633
EES10933
KXG34016
OQU85000

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39740.1	EES07899	AT2G05230.1	21798944
AT2G39740.1	EES10633	AT2G05230.1	21798944
AT2G39740.1	EES10933	AT2G05230.1	21798944
AT2G39740.1	KXG34016	AT2G05230.1	21798944
AT2G39740.1	OQU85000	AT2G05230.1	21798944
AT2G39740.1	EES07899	AT2G05250.1	21798944
AT2G39740.1	EES10633	AT2G05250.1	21798944
AT2G39740.1	EES10933	AT2G05250.1	21798944
AT2G39740.1	KXG34016	AT2G05250.1	21798944
AT2G39740.1	OQU85000	AT2G05250.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0846500-02	Rice	cytosol	47.53	63.25
Solyc06g051780.2.1	Tomato	cytosol	22.49	47.5
PGSC0003DMT400061199	Potato	cytosol	23.67	42.86
GSMUA_Achr6P34020_001	Banana	cytosol	35.11	42.38
KXG33685	Sorghum	nucleus	46.75	39.24
KRG97851	Soybean	cytosol	31.56	38.55
VIT_13s0019g02230.t01	Wine grape	cytosol	31.36	35.1
KRH31028	Soybean	cytosol	31.16	34.73
AT2G39740.1	Thale cress	cytosol	33.33	33.07
CDY07030	Canola	cytosol	32.74	32.87
Bra017054.1-P	Field mustard	cytosol	32.74	32.87
CDX93239	Canola	cytosol	32.35	32.48
KXG32580	Sorghum	cytosol	11.05	24.03
OQU89042	Sorghum	cytosol	15.98	16.27
OQU80706	Sorghum	nucleus	17.16	12.61
OQU84248	Sorghum	nucleus	14.0	10.97
KXG38754	Sorghum	plastid	7.5	5.4

Protein Annotations

EnsemblPlants:OQU87849	EnsemblPlantsGene:SORBI_3003G354232	Gene3D:1.10.1410.10	Gene3D:3.30.460.10	PANTHER:PTHR12271	PANTHER:PTHR12271:SF94
ProteinID:OQU87849	ProteinID:OQU87849.1	ProteinID:OQU87850.1	SUPFAM:SSF81301	SUPFAM:SSF81631	UniParc:UPI0009DC8595
UniProt:A0A1W0W0E0	MapMan:16.10.2.6.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:67288801..67295735

Molecular Weight (calculated)

57645.5 Da

IEP (calculated)

9.600

GRAVY (calculated)

-0.522

Length

507 amino acids

Sequence
(BLAST)

001: MIEYVLNYDL LKACIEDILS TINPVEDDKR KRLSAIQELA DSIYSVGPLR GAAVKPFGSF LSNLYAKSGD LDVSVDLRNG SRLPISKKKK QNALRELMKA
101: LQMRGVARCM EFIPTARVPI LKYMSNHFGI SCDVSVNNYP GQIKSRILYW IGTIDERFGD MVLLVKEWAK ARNINDPKNG TLNSYSLCLL VIFHFQTCEP
201: AILPPLKDVF DVKAAEELVL YDENNVDALC LANIERFLRQ NAGHKNQSSL SHVLESFFHK FFSIQKLSNK VVSTYTGRLE KIQDNTSWMA KSYSLFVEDP
301: FERPDNASRA VRAEELKRIE WAFNHVNYNF TARALNRDEL LSLLCTPPVQ SIIAKRPPNC QSTVAARLYD DQHHLQARGS TGSISSSQGH ATGRQMAHTD
401: QYLKQPQPYN AERMKAGQYQ SINRPQVNTT GLEIAVPVQY HSHTTSLQRA GRRTVSQYQN QQRRMEYSPY QRSGTTRYDP AGRRWSHNGS TWDSASQAST
501: SNTSWQR

Best Arabidopsis Sequence Match ( AT2G39740.3 )
(BLAST)

001: MSRNPFLDPT LQEILQVIKP TRADRDTRIT VIDQLRDVLQ SVECLRGATV QPFGSFVSNL FTRWGDLDIS VDLFSGSSIL FTGKKQKQTL LGHLLRALRA
101: SGLWYKLQFV IHARVPILKV VSGHQRISCD ISIDNLDGLL KSRFLFWISE IDGRFRDLVL LVKEWAKAHN INDSKTGTFN SYSLSLLVIF HFQTCVPAIL
201: PPLRVIYPKS AVDDLTGVRK TAEESIAQVT AANIARFKSE RAKSVNRSSL SELLVSFFAK FSDINVKAQE FGVCPFTGRW ETISSNTTWL PKTYSLFVED
301: PFEQPVNAAR SVSRRNLDRI AQVFQITSRR LVSECNRNSI IGILTGQHIQ ESLYRTISLP SQHHANGMHN VRNLHGQARP QNQQMQQNWS QSYNTPNPPH
401: WPPLTQSRPQ QNWTQNNPRN LQGQPPVQGQ TWPVITQTQT QQKSPYKSGN RPLKNTSAGS SQNQGHIGKP SGHMNGVNSA RPAYTNGVNS ARPPSKIPSQ
501: GGQIWRPRHE Q

Arabidopsis Description

HESO1Protein HESO1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XET5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.