Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0846450-01 | Rice | cytosol | 26.43 | 53.88 |
| Solyc06g051780.2.1 | Tomato | cytosol | 29.29 | 51.25 |
| Os01t0846500-02 | Rice | cytosol | 45.95 | 50.66 |
| PGSC0003DMT400061199 | Potato | cytosol | 30.24 | 45.36 |
| KRG97851 | Soybean | cytosol | 39.05 | 39.52 |
| VIT_13s0019g02230.t01 | Wine grape | cytosol | 41.9 | 38.85 |
| TraesCS3B01G394900.1 | Wheat | cytosol | 42.86 | 37.11 |
| KRH31028 | Soybean | cytosol | 39.76 | 36.7 |
| OQU87849 | Sorghum | cytosol | 42.38 | 35.11 |
| CDX93239 | Canola | cytosol | 41.43 | 34.46 |
| CDY07030 | Canola | cytosol | 41.43 | 34.46 |
| Bra017054.1-P | Field mustard | cytosol | 41.19 | 34.26 |
| AT2G39740.1 | Thale cress | cytosol | 41.67 | 34.25 |
| Zm00001d042885_P006 | Maize | nucleus | 44.29 | 32.01 |
| KXG33685 | Sorghum | nucleus | 41.67 | 28.97 |
| TraesCS3A01G362300.1 | Wheat | nucleus | 42.86 | 27.78 |
| TraesCS3B01G394800.1 | Wheat | nucleus | 42.62 | 27.58 |
| TraesCS3D01G356000.1 | Wheat | nucleus | 42.38 | 27.05 |
| GSMUA_Achr2P01000_001 | Banana | cytosol, mitochondrion, nucleus | 16.67 | 20.41 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus | 16.19 | 19.83 |
| GSMUA_Achr11P... | Banana | cytosol | 16.9 | 19.29 |
Protein Annotations
| Gene3D:1.10.1410.10 | MapMan:16.10.2.6.1 | Gene3D:3.30.460.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0016779 |
| GO:GO:0019538 | GO:GO:0040029 | GO:GO:0050265 | GO:GO:0060964 | GO:GO:0071076 | EnsemblPlantsGene:GSMUA_Achr6G34020_001 |
| EnsemblPlants:GSMUA_Achr6P34020_001 | EnsemblPlants:GSMUA_Achr6T34020_001 | UniProt:M0TCJ5 | PANTHER:PTHR12271 | PANTHER:PTHR12271:SF94 | SUPFAM:SSF81301 |
| SUPFAM:SSF81631 | UniParc:UPI0002968BF5 | SEG:seg | : | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G34020_001]
Coordinates
chr6:-:32884400..32889522
Molecular Weight (calculated)
47797.8 Da
IEP (calculated)
9.428
GRAVY (calculated)
-0.333
Length
420 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYYNSSSIS SDRLGVLGLC LRDILAEIKP EDSDRIKRLN AINQFSDYLR TVQSLRGAVV RPFGSFVSNL YTKWGDLDVS VQLDNGLGDS ASKTVKRNLL
101: RDIMRALRRY GVARYIHFIP NARVPLLIFE GNYHNISFDV SIDNHLGIMK SKILLWISQM DERFRDMVLL TKEWAKAQNI NDPKSGTLNS YSLCLMVIFH
201: FQTCEPPILP PLKEIYGGNI SDDITGWSSI SERHIEDVCA ANIERFRSRN FRRRNQSSLA QLVVSFFDKF SEVETVASEY AICTHTGRWE RIDSNLGWVR
301: TSRSMLIEDP FERPENAART VGPSELRVVS NAFTDTYNKL SSSSMLANRN SLISSLSRPR VSSQLGVRSR VHYNTTGTAA IDSVVLDRFE NVMRLDRQSH
401: ASTSAATVSR RANENNTLRW
101: RDIMRALRRY GVARYIHFIP NARVPLLIFE GNYHNISFDV SIDNHLGIMK SKILLWISQM DERFRDMVLL TKEWAKAQNI NDPKSGTLNS YSLCLMVIFH
201: FQTCEPPILP PLKEIYGGNI SDDITGWSSI SERHIEDVCA ANIERFRSRN FRRRNQSSLA QLVVSFFDKF SEVETVASEY AICTHTGRWE RIDSNLGWVR
301: TSRSMLIEDP FERPENAART VGPSELRVVS NAFTDTYNKL SSSSMLANRN SLISSLSRPR VSSQLGVRSR VHYNTTGTAA IDSVVLDRFE NVMRLDRQSH
401: ASTSAATVSR RANENNTLRW
001: MSRNPFLDPT LQEILQVIKP TRADRDTRIT VIDQLRDVLQ SVECLRGATV QPFGSFVSNL FTRWGDLDIS VDLFSGSSIL FTGKKQKQTL LGHLLRALRA
101: SGLWYKLQFV IHARVPILKV VSGHQRISCD ISIDNLDGLL KSRFLFWISE IDGRFRDLVL LVKEWAKAHN INDSKTGTFN SYSLSLLVIF HFQTCVPAIL
201: PPLRVIYPKS AVDDLTGVRK TAEESIAQVT AANIARFKSE RAKSVNRSSL SELLVSFFAK FSDINVKAQE FGVCPFTGRW ETISSNTTWL PKTYSLFVED
301: PFEQPVNAAR SVSRRNLDRI AQVFQITSRR LVSECNRNSI IGILTGQHIQ ESLYRTISLP SQHHANGMHN VRNLHGQARP QNQQMQQNWS QSYNTPNPPH
401: WPPLTQSRPQ QNWTQNNPRN LQGQPPVQGQ TWPVITQTQT QQKSPYKSGN RPLKNTSAGS SQNQGHIGKP SGHMNGVNSA RPAYTNGVNS ARPPSKIPSQ
501: GGQIWRPRHE Q
101: SGLWYKLQFV IHARVPILKV VSGHQRISCD ISIDNLDGLL KSRFLFWISE IDGRFRDLVL LVKEWAKAHN INDSKTGTFN SYSLSLLVIF HFQTCVPAIL
201: PPLRVIYPKS AVDDLTGVRK TAEESIAQVT AANIARFKSE RAKSVNRSSL SELLVSFFAK FSDINVKAQE FGVCPFTGRW ETISSNTTWL PKTYSLFVED
301: PFEQPVNAAR SVSRRNLDRI AQVFQITSRR LVSECNRNSI IGILTGQHIQ ESLYRTISLP SQHHANGMHN VRNLHGQARP QNQQMQQNWS QSYNTPNPPH
401: WPPLTQSRPQ QNWTQNNPRN LQGQPPVQGQ TWPVITQTQT QQKSPYKSGN RPLKNTSAGS SQNQGHIGKP SGHMNGVNSA RPAYTNGVNS ARPPSKIPSQ
501: GGQIWRPRHE Q
Arabidopsis Description
HESO1Protein HESO1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XET5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.