CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH14137
KRH73997

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39740.1	KRH14137	AT2G05230.1	21798944
AT2G39740.1	KRH73997	AT2G05230.1	21798944
AT2G39740.1	KRH14137	AT2G05250.1	21798944
AT2G39740.1	KRH73997	AT2G05250.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31028	Soybean	cytosol	90.36	82.42
Solyc06g051780.2.1	Tomato	cytosol	37.83	65.42
PGSC0003DMT400061199	Potato	cytosol	39.28	58.21
VIT_13s0019g02230.t01	Wine grape	cytosol	55.42	50.77
Os01t0846450-01	Rice	cytosol	22.65	45.63
AT2G39740.1	Thale cress	cytosol	50.36	40.9
Os01t0846500-02	Rice	cytosol	36.63	39.9
CDY07030	Canola	cytosol	48.43	39.8
Bra017054.1-P	Field mustard	cytosol	48.19	39.6
CDX93239	Canola	cytosol	47.95	39.41
GSMUA_Achr6P34020_001	Banana	cytosol	39.52	39.05
OQU87849	Sorghum	cytosol	38.55	31.56
TraesCS3B01G394900.1	Wheat	cytosol	32.77	28.04
Zm00001d042885_P006	Maize	nucleus	35.66	25.47
KXG33685	Sorghum	nucleus	35.18	24.17
TraesCS3B01G394800.1	Wheat	nucleus	35.18	22.5
TraesCS3A01G362300.1	Wheat	nucleus	34.94	22.38
TraesCS3D01G356000.1	Wheat	nucleus	35.18	22.19
KRH53978	Soybean	cytosol	19.52	21.54
KRH48314	Soybean	endoplasmic reticulum	16.14	9.15
KRH65203	Soybean	nucleus	15.66	8.89

Protein Annotations

Gene3D:1.10.1410.10	EntrezGene:100800950	MapMan:16.10.2.6.1	Gene3D:3.30.460.10	EMBL:ACUP02010821	EnsemblPlantsGene:GLYMA_18G034900
GO:GO:0003674	GO:GO:0003824	GO:GO:0016740	GO:GO:0016779	UniProt:K7MPP3	ProteinID:KRG97848.1
ProteinID:KRG97849.1	ProteinID:KRG97850.1	EnsemblPlants:KRG97851	ProteinID:KRG97851	ProteinID:KRG97851.1	ProteinID:KRG97852.1
PFAM:PF01909	PANTHER:PTHR12271	PANTHER:PTHR12271:SF94	InterPro:Polymerase_NTP_transf_dom	SUPFAM:SSF81301	SUPFAM:SSF81631
UniParc:UPI000233E594	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:2710004..2718146

Molecular Weight (calculated)

46678.3 Da

IEP (calculated)

10.236

GRAVY (calculated)

-0.220

Length

415 amino acids

Sequence
(BLAST)

001: MSTHSTLDIV VNDILRVVTP VQEDWEIRFA IINDLRSIVE SVESLRGATV EPFGSFVSNL FTRWGDLDIS IELSNGLHIS SAGKKQKQTF LGDVLKALRM
101: KGGGSNLQFI SNARVPILKF KSYRQGVSCD ISINNLPGQM KSKILLWINK IDGRFRHMVL LVKEWAKAHK INNSKAGTFN SYSLSLLVIF YFQTCIPAIF
201: PPLKDIYPGN MVDDLIGVRS DAENLIAQTC DANINRFISN RARSINRKSV AELFVEFIGK FAKMDSMAVK MGICPYSGKW EQIEDNMIWL PKTYAIFVED
301: PFEQPQNTAR SVSAGQLKKI TEAFARTHDL LTSTNQNQIS LLSNMAPAHV IRCITRPYGG GYFHPTQPQV QRAIRPQLQS QRHFQNVSQG TSSNSSSSKG
401: HTLVHRGQQI WRPKS

Best Arabidopsis Sequence Match ( AT2G39740.1 )
(BLAST)

001: MSRNPFLDPT LQEILQVIKP TRADRDTRIT VIDQLRDVLQ SVECLRGATV QPFGSFVSNL FTRWGDLDIS VDLFSGSSIL FTGKKQKQTL LGHLLRALRA
101: SGLWYKLQFV IHARVPILKV VSGHQRISCD ISIDNLDGLL KSRFLFWISE IDGRFRDLVL LVKEWAKAHN INDSKTGTFN SYSLSLLVIF HFQTCVPAIL
201: PPLRVIYPKS AVDDLTGVRK TAEESIAQVT AANIARFKSE RAKSVNRSSL SELLVSFFAK FSDINVKAQE FGVCPFTGRW ETISSNTTWL PKTYSLFVED
301: PFEQPVNAAR SVSRRNLDRI AQVFQITSRR LVSECNRNSI IGILTGQHIQ ESLYRTISLP SQHHANGMHN VRNLHGQARP QNQQMQQNWS QSYNTPNPPH
401: WPPLTQSRPQ QNWTQNNPRN LQGQPPVQGQ TWPVITQTQT QQKSPYKSGN RPLKNTSAGS SQNQGHIGKP SGHMNGVNSA RPAYTNGVNS ARPPSKIPSQ
501: GGQIWRPRHE Q

Arabidopsis Description

HESO1Protein HESO1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XET5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.