CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
plasma membrane 1
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019808_P003	Maize	cytosol	26.86	39.3
Os09t0570600-01	Rice	cytosol	31.38	38.06
Bra038277.1-P	Field mustard	cytosol	39.1	32.38
VIT_07s0031g02870.t01	Wine grape	cytosol	47.61	32.25
CDX99148	Canola	cytosol	38.56	31.87
OQU89042	Sorghum	cytosol	41.22	31.12
CDX86037	Canola	cytosol	37.77	30.41
Solyc11g044900.1.1	Tomato	cytosol	43.88	29.89
TraesCS4A01G311100.1	Wheat	nucleus	42.29	28.6
TraesCS4D01G002900.1	Wheat	nucleus, peroxisome, plastid	42.02	28.16
TraesCS7B01G180400.1	Wheat	cytosol	41.76	27.89
TraesCS7D01G279400.1	Wheat	cytosol	41.76	27.89
TraesCS7A01G280800.1	Wheat	cytosol	41.49	27.76
HORVU4Hr1G000070.38	Barley	cytosol	42.29	27.46
TraesCS4B01G003200.1	Wheat	nucleus	41.22	27.34
PGSC0003DMT400076240	Potato	nucleus	44.41	27.15
AT3G45760.1	Thale cress	nucleus	33.51	26.58
Os08t0559900-01	Rice	nucleus	40.96	26.51
Solyc09g091860.2.1	Tomato	nucleus	43.88	24.63
AT3G45750.1	Thale cress	cytosol	41.22	22.73
Zm00001d049928_P005	Maize	nucleus	40.43	22.03
OQU80706	Sorghum	nucleus	40.43	22.03
PGSC0003DMT400059048	Potato	plastid	19.68	19.89
KRG97851	Soybean	cytosol	21.54	19.52
KRH31028	Soybean	cytosol	22.34	18.46
KRH65203	Soybean	nucleus	21.01	10.81
KRH48314	Soybean	endoplasmic reticulum	20.48	10.52
Zm00001d019809_P001	Maize	mitochondrion	4.79	5.49

Protein Annotations

EMBL:ACUP02003491	EnsemblPlants:KRH53978	EnsemblPlantsGene:GLYMA_06G158600	Gene3D:1.10.1410.10	Gene3D:3.30.460.10	PANTHER:PTHR12271
PANTHER:PTHR12271:SF38	ProteinID:KRH53978	ProteinID:KRH53978.1	SUPFAM:SSF81301	SUPFAM:SSF81631	UniParc:UPI000294EE12
UniProt:K7KVB1	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:13037862..13055507

Molecular Weight (calculated)

43318.2 Da

IEP (calculated)

8.988

GRAVY (calculated)

-0.268

Length

376 amino acids

Sequence
(BLAST)

001: MYWCPKQNSP KGRSERENHF FHFKPLCPLS AHRFLSWFRE VKMESEDSFS DLIKMAKKLE SDILAKINFS SAHVIDLDRL LCDTFIRQCP TPLDYDNRRD
101: LVHIFNTMTK EIYGNGDGSP VVEEYGSFVM DMFDGKSDID LSLNFNNSIE VSRQKKISAL YRFNKKLQSI QSKGHVTGLQ LIFSARVPII KVTDSGTGIE
201: CDLSVDNRDG INKSHIIRAI SDIDERFRKL CFLMKSWAKV HDINSPKDST LSSFSIVSFV AFHLQTRNPP ILPPFSILLK EGDNPAYVAK VVETYFNYGK
301: QNKESLAMLF ITLLVKLASV ENLWQKGFCA SLYEGSWILK SWKCSYSMSV EDFIDRSQNV ARAVRKKVKF NLWMYP

Best Arabidopsis Sequence Match ( AT3G45750.1 )
(BLAST)

001: MGSRGNVAED KNVSSKVIRK KVNNTVSIAL KRYKIDSYIL LDLDKVLNDV YCSFRPVSAD YNTRKELVKN LNTMALDIYG KSEESSPVLE AYGSFVMDMY
101: SSQSDLDVSI NFGNGTSEIP REKKLEILKR FAKKLRSLQG EGQVKNVESI FSAKVPIVKF SDQGTGVECD LSVENKDGIL NSQIVRIISQ IDGRFQKLCL
201: LVKHWAKAHE VNSALHRTLN SVSITLLVAL HLQTQNPPIL PPFSMLLKDG MDPPNVEKRA QKFLNWGQRN QESLGRLFAT FFIKLQSVEF LWRQGLCVSV
301: LNGLWISKKW KKVGVGSISV EDFTNISQNV ARRVNGAGAK KIYSSINRTV EDIFEFLNDK VAGTDLRHRL FGKGSVVQIP PVAPLNGKTA GIHKVSGQQA
401: VVQPSPPVPR LNGKIAGTHR KQKVFAQQAV VEPRPPVLPL NGNIAGTHFR HESFRQQAVL QPLPPLRPVN GSIGGTHFRD RLFDQQVLVE PRPLLPPFSG
501: SIAETHFRHR SFPQEAVLDP RPSVQSRNVY SQQLHNNYRN GFSGPPEEHH TKRLCLGNRY RALEETGNWR EEERYEDPRG KRNRYVGNFN GLEEFREIPR
601: FGIHSNPLDD PYRQVPLNAG TNGHLVHHRH DGRYNGEEPM HVGQWQDYTR RVGSPPLQQT PPPYDRVSYE DFRPHLGRSF YH

Arabidopsis Description

Nucleotidyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q7Y216]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.