Factsheet for Os09t0570600-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019808_P003	Maize	cytosol	50.97	61.48
OQU89042	Sorghum	cytosol	59.03	36.75
HORVU4Hr1G000070.38	Barley	cytosol	68.06	36.44
TraesCS4A01G311100.1	Wheat	nucleus	63.23	35.25
TraesCS4D01G002900.1	Wheat	nucleus, peroxisome, plastid	62.26	34.4
TraesCS4B01G003200.1	Wheat	nucleus	60.97	33.33
KRH53978	Soybean	cytosol	38.06	31.38
Os08t0559900-01	Rice	nucleus	55.81	29.78
Bra038277.1-P	Field mustard	cytosol	35.48	24.23
CDX99148	Canola	cytosol	35.16	23.96
VIT_07s0031g02870.t01	Wine grape	cytosol	40.97	22.88
CDX86037	Canola	cytosol	34.19	22.7
Solyc11g044900.1.1	Tomato	cytosol	39.68	22.28
PGSC0003DMT400076240	Potato	nucleus	40.65	20.49
Os01t0846450-01	Rice	cytosol	12.9	19.42
Os02t0122100-00	Rice	cytosol	22.9	19.35
AT3G45760.1	Thale cress	nucleus	29.03	18.99
Solyc09g091860.2.1	Tomato	nucleus	40.0	18.51
PGSC0003DMT400059048	Potato	plastid	20.65	17.2
Os10t0188300-01	Rice	cytosol, nucleus, plastid	20.32	16.94
AT3G45750.1	Thale cress	cytosol	35.81	16.28
Os01t0846500-02	Rice	cytosol	18.39	14.96

Protein Annotations

EnsemblPlants:Os09t0570600-01	EnsemblPlantsGene:Os09g0570600	Gene3D:1.10.1410.10	Gene3D:3.30.460.10	PANTHER:PTHR12271	PANTHER:PTHR12271:SF62
ProteinID:BAD46233.1	ProteinID:BAF25902.1	ProteinID:BAT09515.1	SEG:seg	SUPFAM:SSF81301	SUPFAM:SSF81631
UniParc:UPI000043A51C	UniProt:Q652N4	MapMan:35.1	:	:	:

Description

PAP/25A core domain containing protein. (Os09t0570600-01);Non-protein coding transcript. (Os09t0570600-02)

Coordinates

chr9:+:22778763..22783735

Molecular Weight (calculated)

34524.3 Da

IEP (calculated)

5.212

GRAVY (calculated)

-0.086

Length

310 amino acids

Sequence
(BLAST)

001: MTGEDTTRSP PPSPPAVFSM PSSSSESTQS SDSEVSAWDP QVLRAHAECL ESEELAALSV NRTLLPILDN LLLQVYTMLR PKPLDYEQRT TLVHVFNNIA
101: NQIFGNGIFC GVLPVVTARV PIVNVIDRGT GIECDITVEN KDGMTRSMIF KFISSLDPRF QILSYLVKFW AKIHDVNSPR ERTLSSMSIV SLVAFHLQTR
201: DPPILPPLSA LLKDGSDFES VERNTLAFKG FGRTNKETVA ELFVSLISKL LSAESLWEHG LCASNFEASW ISKTWKKGIG NLNVSWEKGD AEDLQMSSRL
301: CFELVRFHEG

Best Arabidopsis Sequence Match ( AT3G45750.1 )
(BLAST)

001: MGSRGNVAED KNVSSKVIRK KVNNTVSIAL KRYKIDSYIL LDLDKVLNDV YCSFRPVSAD YNTRKELVKN LNTMALDIYG KSEESSPVLE AYGSFVMDMY
101: SSQSDLDVSI NFGNGTSEIP REKKLEILKR FAKKLRSLQG EGQVKNVESI FSAKVPIVKF SDQGTGVECD LSVENKDGIL NSQIVRIISQ IDGRFQKLCL
201: LVKHWAKAHE VNSALHRTLN SVSITLLVAL HLQTQNPPIL PPFSMLLKDG MDPPNVEKRA QKFLNWGQRN QESLGRLFAT FFIKLQSVEF LWRQGLCVSV
301: LNGLWISKKW KKVGVGSISV EDFTNISQNV ARRVNGAGAK KIYSSINRTV EDIFEFLNDK VAGTDLRHRL FGKGSVVQIP PVAPLNGKTA GIHKVSGQQA
401: VVQPSPPVPR LNGKIAGTHR KQKVFAQQAV VEPRPPVLPL NGNIAGTHFR HESFRQQAVL QPLPPLRPVN GSIGGTHFRD RLFDQQVLVE PRPLLPPFSG
501: SIAETHFRHR SFPQEAVLDP RPSVQSRNVY SQQLHNNYRN GFSGPPEEHH TKRLCLGNRY RALEETGNWR EEERYEDPRG KRNRYVGNFN GLEEFREIPR
601: FGIHSNPLDD PYRQVPLNAG TNGHLVHHRH DGRYNGEEPM HVGQWQDYTR RVGSPPLQQT PPPYDRVSYE DFRPHLGRSF YH

Arabidopsis Description

Nucleotidyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q7Y216]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.