Factsheet for Zm00001d019808_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0570600-01	Rice	cytosol	61.48	50.97
OQU89042	Sorghum	cytosol	75.1	38.76
TraesCS4A01G311100.1	Wheat	nucleus	62.26	28.78
HORVU4Hr1G000070.38	Barley	cytosol	63.81	28.32
TraesCS4D01G002900.1	Wheat	nucleus, peroxisome, plastid	60.31	27.63
KRH53978	Soybean	cytosol	39.3	26.86
TraesCS4B01G003200.1	Wheat	nucleus	59.14	26.81
Zm00001d049928_P005	Maize	nucleus	54.47	20.29
VIT_07s0031g02870.t01	Wine grape	cytosol	43.19	20.0
Solyc11g044900.1.1	Tomato	cytosol	40.86	19.02
Bra038277.1-P	Field mustard	cytosol	33.46	18.94
CDX99148	Canola	cytosol	33.46	18.9
AT3G45760.1	Thale cress	nucleus	33.07	17.93
CDX86037	Canola	cytosol	32.3	17.77
PGSC0003DMT400076240	Potato	nucleus	41.63	17.4
Solyc09g091860.2.1	Tomato	nucleus	41.63	15.97
AT3G45750.1	Thale cress	cytosol	36.58	13.78
PGSC0003DMT400059048	Potato	plastid	18.68	12.9
Zm00001d042885_P006	Maize	nucleus	22.18	9.81
Zm00001d015059_P001	Maize	nucleus	21.01	8.9
Zm00001d014321_P007	Maize	plastid	19.07	6.21
Zm00001d019809_P001	Maize	mitochondrion	4.28	3.35

Protein Annotations

EnsemblPlants:Zm00001d019808_P003	EnsemblPlants:Zm00001d019808_T003	EnsemblPlantsGene:Zm00001d019808	Gene3D:1.10.1410.10	Gene3D:3.30.460.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0016740	PANTHER:PTHR12271	PANTHER:PTHR12271:SF62	ProteinID:ONM53750.1	SEG:seg
SUPFAM:SSF81301	SUPFAM:SSF81631	UniParc:UPI000842B82E	UniProt:A0A1D6I0E7	MapMan:35.1	:

Description

Nucleotidyltransferase family protein

Coordinates

chr7:+:63658397..63661214

Molecular Weight (calculated)

29259.8 Da

IEP (calculated)

7.406

GRAVY (calculated)

0.173

Length

257 amino acids

Sequence
(BLAST)

001: MILLFPCCRC SEASTWDSQV LSRHAECLEL EELTAISVNP SLLPALNQLL LEAYAILRPK PLDYDQRNTL VDVFRKMVNQ RFGSGIFCGV LPIVSARVPI
101: LKVIDRGTGV ECDISVENKD GMTRSMIIKF VSSLDERFQI LSYLVKFWAK VHDLNTPRQL TMSSMSIISL VAFHLQVPWV NYYFVQTRHP PILPAFSDLL
201: KDGLDCESIE RNALRFRDFG SRNKESVAEL FVSLISKVSN YKVHLLLMFA VEVTCHN

Best Arabidopsis Sequence Match ( AT3G45750.2 )
(BLAST)

001: MDMYSSQSDL DVSINFGNGT SEIPREKKLE ILKRFAKKLR SLQGKIFVPF FLLLSCMPIP LLFSIYTKNP NREGQVKNVE SIFSAKVPIV KFSDQGTGVE
101: CDLSVENKDG ILNSQIVRII SQIDGRFQKL CLLVKHWAKA HEVNSALHRT LNSVSITLLV ALHLQTQNPP ILPPFSMLLK DGMDPPNVEK RAQKFLNWGQ
201: RNQESLGRLF ATFFIKLQSV EFLWRQGLCV SVLNGLWISK KWKKVGVGSI SVEDFTNISQ NVARRVNGAG AKKIYSSINR TVEDIFEFLN DKVAGTDLRH
301: RLFGKGSVVQ IPPVAPLNGK TAGIHKVSGQ QAVVQPSPPV PRLNGKIAGT HRKQKVFAQQ AVVEPRPPVL PLNGNIAGTH FRHESFRQQA VLQPLPPLRP
401: VNGSIGGTHF RDRLFDQQVL VEPRPLLPPF SGSIAETHFR HRSFPQEAVL DPRPSVQSRN VYSQQLHNNY RNGFSGPPEE HHTKRLCLGN RYRALEETGN
501: WREEERYEDP RGKRNRYVGN FNGLEEFREI PRFGIHSNPL DDPYRQVPLN AGTNGHLVHH RHDGRYNGEE PMHVGQWQDY TRRVGSPPLQ QTPPPYDRVS
601: YEDFRPHLGR SFYH

Arabidopsis Description

Nucleotidyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q7Y216]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.