Factsheet for VIT_07s0031g02870.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53978	Soybean	cytosol	32.25	47.61
Zm00001d019808_P003	Maize	cytosol	20.0	43.19
Os09t0570600-01	Rice	cytosol	22.88	40.97
Solyc11g044900.1.1	Tomato	cytosol	38.2	38.41
OQU89042	Sorghum	cytosol	32.61	36.35
Bra038277.1-P	Field mustard	cytosol	29.55	36.12
CDX99148	Canola	cytosol	29.37	35.82
PGSC0003DMT400076240	Potato	nucleus	39.64	35.77
CDX86037	Canola	cytosol	29.01	34.48
TraesCS4A01G311100.1	Wheat	nucleus	32.79	32.73
Solyc09g091860.2.1	Tomato	nucleus	39.28	32.54
TraesCS4D01G002900.1	Wheat	nucleus, peroxisome, plastid	32.43	32.09
PGSC0003DMT400059048	Potato	plastid	21.44	31.99
TraesCS4B01G003200.1	Wheat	nucleus	32.25	31.57
TraesCS7B01G180400.1	Wheat	cytosol	31.89	31.44
TraesCS7D01G279400.1	Wheat	cytosol	31.71	31.26
TraesCS7A01G280800.1	Wheat	cytosol	31.35	30.96
HORVU4Hr1G000070.38	Barley	cytosol	32.07	30.74
Os08t0559900-01	Rice	nucleus	32.07	30.64
AT3G45760.1	Thale cress	nucleus	25.05	29.32
OQU80706	Sorghum	nucleus	32.25	25.94
Zm00001d049928_P005	Maize	nucleus	31.89	25.65
AT3G45750.1	Thale cress	cytosol	30.27	24.63
VIT_13s0019g02230.t01	Wine grape	cytosol	17.48	21.41
Zm00001d019809_P001	Maize	mitochondrion	7.03	11.89
VIT_15s0048g01340.t01	Wine grape	nucleus	12.97	9.96

Protein Annotations

Gene3D:1.10.1410.10	EntrezGene:100247367	EntrezGene:100854980	wikigene:100854980	Gene3D:3.30.460.10	MapMan:35.1
ProteinID:CBI21636	ProteinID:CBI21636.3	UniProt:D7SWI7	EMBL:FN595233	EntrezGene:LOC100854980	wikigene:LOC100854980
PANTHER:PTHR12271	PANTHER:PTHR12271:SF38	SUPFAM:SSF81301	SUPFAM:SSF81631	UniParc:UPI0001BE20D5	ArrayExpress:VIT_07s0031g02870
EnsemblPlantsGene:VIT_07s0031g02870	EnsemblPlants:VIT_07s0031g02870.t01	RefSeq:XP_002272983	RefSeq:XP_002272983.2	RefSeq:XP_003632523	RefSeq:XP_003632523.1
RefSeq:XP_010652956.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7:-:19503377..19537846

Molecular Weight (calculated)

61468.3 Da

IEP (calculated)

9.065

GRAVY (calculated)

-0.195

Length

555 amino acids

Sequence
(BLAST)

001: MEKSEAVLLK KAKKLESQGL QQSIVKPERA PVFEELLHNV LHIRHPKPID YFNRIDLIRI FNVISKEIHG NGDDFTIVEG FGSFLMDMFS AGSDLDLSIN
101: FGNYEVEVSR AKRIQTLRKF EKKLKALQRI GHVSNVILIT GARVPILKIT DRGTGIECDI SVENRDGIAK SRIIRMVSSI DHRFQKLSFL MKAWAKAHDI
201: NSSKEHTLNS LSIILLVAFH LQTRDPPILP PFSVILKDGS DMETVTKNVI NFLGYGEVNK ESLAELFVTL LLKLQSIETL WSKGLCASIY DGSWIYKTWD
301: SGVGCINVED FTDRSQNVAR AVATKQVTKI YKCIHHSLHW ISVFMNGRME GPKLRRRLFG QDHVPKPLSG PGQLPVPEDG GKSLDENAAS ALTQDDFIQT
401: KKPRLMDGWA GQKHDSVELA SNVAWPSTQH LVYQAHQFAP GPPQLPFSPL QNPVCFAGSQ SLNVMPPMPS MGPMHGWGGQ QHAPGAATST AAGPFAIPFA
501: YQVLQAALGL PQLLDVPLQQ PASAPLQTML HSHGLQGSTT TVPRPSAELP YARHN

Best Arabidopsis Sequence Match ( AT3G45750.1 )
(BLAST)

001: MGSRGNVAED KNVSSKVIRK KVNNTVSIAL KRYKIDSYIL LDLDKVLNDV YCSFRPVSAD YNTRKELVKN LNTMALDIYG KSEESSPVLE AYGSFVMDMY
101: SSQSDLDVSI NFGNGTSEIP REKKLEILKR FAKKLRSLQG EGQVKNVESI FSAKVPIVKF SDQGTGVECD LSVENKDGIL NSQIVRIISQ IDGRFQKLCL
201: LVKHWAKAHE VNSALHRTLN SVSITLLVAL HLQTQNPPIL PPFSMLLKDG MDPPNVEKRA QKFLNWGQRN QESLGRLFAT FFIKLQSVEF LWRQGLCVSV
301: LNGLWISKKW KKVGVGSISV EDFTNISQNV ARRVNGAGAK KIYSSINRTV EDIFEFLNDK VAGTDLRHRL FGKGSVVQIP PVAPLNGKTA GIHKVSGQQA
401: VVQPSPPVPR LNGKIAGTHR KQKVFAQQAV VEPRPPVLPL NGNIAGTHFR HESFRQQAVL QPLPPLRPVN GSIGGTHFRD RLFDQQVLVE PRPLLPPFSG
501: SIAETHFRHR SFPQEAVLDP RPSVQSRNVY SQQLHNNYRN GFSGPPEEHH TKRLCLGNRY RALEETGNWR EEERYEDPRG KRNRYVGNFN GLEEFREIPR
601: FGIHSNPLDD PYRQVPLNAG TNGHLVHHRH DGRYNGEEPM HVGQWQDYTR RVGSPPLQQT PPPYDRVSYE DFRPHLGRSF YH

Arabidopsis Description

Nucleotidyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q7Y216]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.