Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G180400.1 | Wheat | cytosol | 99.64 | 99.64 |
| TraesCS7A01G280800.1 | Wheat | cytosol | 89.88 | 90.04 |
| Os08t0559900-01 | Rice | nucleus | 63.41 | 61.45 |
| OQU80706 | Sorghum | nucleus | 57.02 | 46.52 |
| Zm00001d049928_P005 | Maize | nucleus | 56.84 | 46.38 |
| TraesCS4D01G002900.1 | Wheat | nucleus, peroxisome, plastid | 46.0 | 46.17 |
| KRH53978 | Soybean | cytosol | 27.89 | 41.76 |
| Solyc11g044900.1.1 | Tomato | cytosol | 33.21 | 33.88 |
| Bra038277.1-P | Field mustard | cytosol | 25.93 | 32.16 |
| CDX99148 | Canola | cytosol | 25.75 | 31.87 |
| VIT_07s0031g02870.t01 | Wine grape | cytosol | 31.26 | 31.71 |
| CDX86037 | Canola | cytosol | 25.4 | 30.62 |
| PGSC0003DMT400076240 | Potato | nucleus | 32.5 | 29.76 |
| Solyc09g091860.2.1 | Tomato | nucleus | 32.5 | 27.31 |
| AT3G45760.1 | Thale cress | nucleus | 22.2 | 26.37 |
| PGSC0003DMT400059048 | Potato | plastid | 16.87 | 25.54 |
| AT3G45750.1 | Thale cress | cytosol | 25.93 | 21.41 |
| TraesCS3D01G356000.1 | Wheat | nucleus | 15.63 | 13.37 |
| TraesCS1D01G133800.1 | Wheat | nucleus, plastid | 12.08 | 8.21 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G279400.1 | EnsemblPlantsGene:TraesCS7D01G279400 | Gene3D:1.10.1410.10 | Gene3D:3.30.460.10 | PANTHER:PTHR12271 | PANTHER:PTHR12271:SF38 |
| SEG:seg | SUPFAM:SSF81301 | SUPFAM:SSF81631 | TIGR:cd05402 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr7D:+:270773990..270781246
Molecular Weight (calculated)
63157.2 Da
IEP (calculated)
9.302
GRAVY (calculated)
-0.278
Length
563 amino acids
Sequence
(BLAST)
(BLAST)
001: MASVTVTPLS APEPEPSARP DNLPRPSVAI SWDTQALCKH AETCELGSEA FLIDPALLPT LEGLLLETYA MLRPKPVEYE QRRTMIDVFN KIAKDIFGKK
101: DDFPVVEPFG SFTMDLFTTK SDLDLSVNFS NDMDGQFARK DKISVIRKFA KVLHKHQSRG RCYGVLPVLS AIVPVLKVTD KGTGVECDIS VENKDGMSRS
201: MIFKLVSSID ERFQILCYLM KFWAKTHDVN CPKDRTMSSM AIISLVAFHL QTRHPPILPA FSGLLKDGAD FASVQRNVVL FKGFGSTNKE SVAELFVSLM
301: SKLLAVKDLW EQGLCASNFD GFWISKTWNR GIGNLSVEDF LDRSQNFARS VGKVEMQNIC ECLKDTVSKL TDFFRGKIDA LTLKILIFGA LNQDVPVSHP
401: SPKHVKSKRK RELRHDPGNS EKQQKKVKHA AQRGRAANRT DSILPTPTVF MPHVHQVGST QPFNQIVHPS QLPIPPRLSY GLPQAHFHPG PHMIGQPHGS
501: FIYSTDPGIQ LQQQARHMFV PLPVHQPAIN RSFHPHGFNG AHEVLYDDNS WLPYGINPNY RRV
101: DDFPVVEPFG SFTMDLFTTK SDLDLSVNFS NDMDGQFARK DKISVIRKFA KVLHKHQSRG RCYGVLPVLS AIVPVLKVTD KGTGVECDIS VENKDGMSRS
201: MIFKLVSSID ERFQILCYLM KFWAKTHDVN CPKDRTMSSM AIISLVAFHL QTRHPPILPA FSGLLKDGAD FASVQRNVVL FKGFGSTNKE SVAELFVSLM
301: SKLLAVKDLW EQGLCASNFD GFWISKTWNR GIGNLSVEDF LDRSQNFARS VGKVEMQNIC ECLKDTVSKL TDFFRGKIDA LTLKILIFGA LNQDVPVSHP
401: SPKHVKSKRK RELRHDPGNS EKQQKKVKHA AQRGRAANRT DSILPTPTVF MPHVHQVGST QPFNQIVHPS QLPIPPRLSY GLPQAHFHPG PHMIGQPHGS
501: FIYSTDPGIQ LQQQARHMFV PLPVHQPAIN RSFHPHGFNG AHEVLYDDNS WLPYGINPNY RRV
001: MGSRGNVAED KNVSSKVIRK KVNNTVSIAL KRYKIDSYIL LDLDKVLNDV YCSFRPVSAD YNTRKELVKN LNTMALDIYG KSEESSPVLE AYGSFVMDMY
101: SSQSDLDVSI NFGNGTSEIP REKKLEILKR FAKKLRSLQG EGQVKNVESI FSAKVPIVKF SDQGTGVECD LSVENKDGIL NSQIVRIISQ IDGRFQKLCL
201: LVKHWAKAHE VNSALHRTLN SVSITLLVAL HLQTQNPPIL PPFSMLLKDG MDPPNVEKRA QKFLNWGQRN QESLGRLFAT FFIKLQSVEF LWRQGLCVSV
301: LNGLWISKKW KKVGVGSISV EDFTNISQNV ARRVNGAGAK KIYSSINRTV EDIFEFLNDK VAGTDLRHRL FGKGSVVQIP PVAPLNGKTA GIHKVSGQQA
401: VVQPSPPVPR LNGKIAGTHR KQKVFAQQAV VEPRPPVLPL NGNIAGTHFR HESFRQQAVL QPLPPLRPVN GSIGGTHFRD RLFDQQVLVE PRPLLPPFSG
501: SIAETHFRHR SFPQEAVLDP RPSVQSRNVY SQQLHNNYRN GFSGPPEEHH TKRLCLGNRY RALEETGNWR EEERYEDPRG KRNRYVGNFN GLEEFREIPR
601: FGIHSNPLDD PYRQVPLNAG TNGHLVHHRH DGRYNGEEPM HVGQWQDYTR RVGSPPLQQT PPPYDRVSYE DFRPHLGRSF YH
101: SSQSDLDVSI NFGNGTSEIP REKKLEILKR FAKKLRSLQG EGQVKNVESI FSAKVPIVKF SDQGTGVECD LSVENKDGIL NSQIVRIISQ IDGRFQKLCL
201: LVKHWAKAHE VNSALHRTLN SVSITLLVAL HLQTQNPPIL PPFSMLLKDG MDPPNVEKRA QKFLNWGQRN QESLGRLFAT FFIKLQSVEF LWRQGLCVSV
301: LNGLWISKKW KKVGVGSISV EDFTNISQNV ARRVNGAGAK KIYSSINRTV EDIFEFLNDK VAGTDLRHRL FGKGSVVQIP PVAPLNGKTA GIHKVSGQQA
401: VVQPSPPVPR LNGKIAGTHR KQKVFAQQAV VEPRPPVLPL NGNIAGTHFR HESFRQQAVL QPLPPLRPVN GSIGGTHFRD RLFDQQVLVE PRPLLPPFSG
501: SIAETHFRHR SFPQEAVLDP RPSVQSRNVY SQQLHNNYRN GFSGPPEEHH TKRLCLGNRY RALEETGNWR EEERYEDPRG KRNRYVGNFN GLEEFREIPR
601: FGIHSNPLDD PYRQVPLNAG TNGHLVHHRH DGRYNGEEPM HVGQWQDYTR RVGSPPLQQT PPPYDRVSYE DFRPHLGRSF YH
Arabidopsis Description
Nucleotidyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q7Y216]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.