Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU80706 | Sorghum | nucleus | 85.07 | 85.07 |
| TraesCS7A01G280800.1 | Wheat | cytosol | 47.54 | 58.36 |
| Os08t0559900-01 | Rice | nucleus | 49.13 | 58.35 |
| TraesCS7B01G180400.1 | Wheat | cytosol | 46.38 | 56.84 |
| TraesCS7D01G279400.1 | Wheat | cytosol | 46.38 | 56.84 |
| Zm00001d019808_P003 | Maize | cytosol | 20.29 | 54.47 |
| KRH53978 | Soybean | cytosol | 22.03 | 40.43 |
| Bra038277.1-P | Field mustard | cytosol | 21.88 | 33.26 |
| CDX99148 | Canola | cytosol | 21.74 | 32.97 |
| Solyc11g044900.1.1 | Tomato | cytosol | 25.8 | 32.25 |
| CDX86037 | Canola | cytosol | 21.59 | 31.91 |
| VIT_07s0031g02870.t01 | Wine grape | cytosol | 25.65 | 31.89 |
| PGSC0003DMT400076240 | Potato | nucleus | 24.78 | 27.8 |
| AT3G45760.1 | Thale cress | nucleus | 18.99 | 27.64 |
| Solyc09g091860.2.1 | Tomato | nucleus | 25.8 | 26.57 |
| PGSC0003DMT400059048 | Potato | plastid | 13.91 | 25.81 |
| AT3G45750.1 | Thale cress | cytosol | 22.32 | 22.58 |
| Zm00001d019809_P001 | Maize | mitochondrion | 8.26 | 17.38 |
| Zm00001d042885_P006 | Maize | nucleus | 13.19 | 15.66 |
| Zm00001d015059_P001 | Maize | nucleus | 11.59 | 13.18 |
| Zm00001d014321_P007 | Maize | plastid | 11.01 | 9.63 |
Protein Annotations
| EMBL:EU952091 | EnsemblPlants:Zm00001d049928_P005 | EnsemblPlants:Zm00001d049928_T005 | EnsemblPlantsGene:Zm00001d049928 | EntrezGene:100274680 | Gene3D:1.10.1410.10 |
| Gene3D:3.30.460.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 | GO:GO:0016779 | InterPro:Polymerase_NTP_transf_dom |
| PANTHER:PTHR12271 | PANTHER:PTHR12271:SF38 | PFAM:PF01909 | ProteinID:AQK51593.1 | SEG:seg | SUPFAM:SSF81301 |
| SUPFAM:SSF81631 | UniParc:UPI000182BAF8 | UniProt:B6SH76 | MapMan:35.1 | : | : |
Description
Nucleotidyltransferase family protein
Coordinates
chr4:-:53483182..53499946
Molecular Weight (calculated)
76566.9 Da
IEP (calculated)
9.642
GRAVY (calculated)
-0.420
Length
690 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAASPPV PLGPDASDLL DGDLRLKPAV AISWDSEALH SHAERCEIES KVCVIDPSLL PALDDLLQDI YESLQPQPVD YEHRNLMVNV FNKIVGEIFG
101: KNNELPIVEP FGSFTMDLFT PQSDLDLSVN FNTDANDQYP RKNKISAIRK LAHVLFSHQR HGRCYGVSPI VTARVPVLKV IDKGTGVECD ISVENKDGMS
201: RSAIFKFISS IDKRFRILCY LMKFWAKVHD VNCPKDRTMS SMAIISLVSF HLQTRCPPIL PAFSAVLKDG TDFASIEKNV SLFQGFGHSN KESIAELFVS
301: LMSKLVSVEG LWEQGLCASN FEGTWISKTW AKGVGNLNVE DFLDRSQNFA RSVGVKEMQK ICECLRASVS DLSKFSKGEI AAPKLKALLF KPLNQVNPVI
401: KPHQKTIKRK RTNPNKTRTN PIQKNAKKKK ALEQDKLAIS PGQKDGKKTL DQEKSVSSPI QKGAKKTKPL NQDKLVISPG QEDDKKPLVQ DEPIVVSPIQ
501: KNNNKYVDQE KSLQQEKQII SPGQKDDKKS SKVGPDSACN HVQQKKVKAT VSTGRAANTH VSSSRPRSVF IPQAHWPSQP IVDRFAHIPE HLISPSAFSY
601: GLPQPLMHPA YPHPHSHQGL VGQGQGNFLH FNPGIELQHQ GQAFFGPPAV YHPMVNGFHP FGINGAQQVQ YIDNRMVQRP PYGFGPGFWG
101: KNNELPIVEP FGSFTMDLFT PQSDLDLSVN FNTDANDQYP RKNKISAIRK LAHVLFSHQR HGRCYGVSPI VTARVPVLKV IDKGTGVECD ISVENKDGMS
201: RSAIFKFISS IDKRFRILCY LMKFWAKVHD VNCPKDRTMS SMAIISLVSF HLQTRCPPIL PAFSAVLKDG TDFASIEKNV SLFQGFGHSN KESIAELFVS
301: LMSKLVSVEG LWEQGLCASN FEGTWISKTW AKGVGNLNVE DFLDRSQNFA RSVGVKEMQK ICECLRASVS DLSKFSKGEI AAPKLKALLF KPLNQVNPVI
401: KPHQKTIKRK RTNPNKTRTN PIQKNAKKKK ALEQDKLAIS PGQKDGKKTL DQEKSVSSPI QKGAKKTKPL NQDKLVISPG QEDDKKPLVQ DEPIVVSPIQ
501: KNNNKYVDQE KSLQQEKQII SPGQKDDKKS SKVGPDSACN HVQQKKVKAT VSTGRAANTH VSSSRPRSVF IPQAHWPSQP IVDRFAHIPE HLISPSAFSY
601: GLPQPLMHPA YPHPHSHQGL VGQGQGNFLH FNPGIELQHQ GQAFFGPPAV YHPMVNGFHP FGINGAQQVQ YIDNRMVQRP PYGFGPGFWG
001: MGSRGNVAED KNVSSKVIRK KVNNTVSIAL KRYKIDSYIL LDLDKVLNDV YCSFRPVSAD YNTRKELVKN LNTMALDIYG KSEESSPVLE AYGSFVMDMY
101: SSQSDLDVSI NFGNGTSEIP REKKLEILKR FAKKLRSLQG EGQVKNVESI FSAKVPIVKF SDQGTGVECD LSVENKDGIL NSQIVRIISQ IDGRFQKLCL
201: LVKHWAKAHE VNSALHRTLN SVSITLLVAL HLQTQNPPIL PPFSMLLKDG MDPPNVEKRA QKFLNWGQRN QESLGRLFAT FFIKLQSVEF LWRQGLCVSV
301: LNGLWISKKW KKVGVGSISV EDFTNISQNV ARRVNGAGAK KIYSSINRTV EDIFEFLNDK VAGTDLRHRL FGKGSVVQIP PVAPLNGKTA GIHKVSGQQA
401: VVQPSPPVPR LNGKIAGTHR KQKVFAQQAV VEPRPPVLPL NGNIAGTHFR HESFRQQAVL QPLPPLRPVN GSIGGTHFRD RLFDQQVLVE PRPLLPPFSG
501: SIAETHFRHR SFPQEAVLDP RPSVQSRNVY SQQLHNNYRN GFSGPPEEHH TKRLCLGNRY RALEETGNWR EEERYEDPRG KRNRYVGNFN GLEEFREIPR
601: FGIHSNPLDD PYRQVPLNAG TNGHLVHHRH DGRYNGEEPM HVGQWQDYTR RVGSPPLQQT PPPYDRVSYE DFRPHLGRSF YH
101: SSQSDLDVSI NFGNGTSEIP REKKLEILKR FAKKLRSLQG EGQVKNVESI FSAKVPIVKF SDQGTGVECD LSVENKDGIL NSQIVRIISQ IDGRFQKLCL
201: LVKHWAKAHE VNSALHRTLN SVSITLLVAL HLQTQNPPIL PPFSMLLKDG MDPPNVEKRA QKFLNWGQRN QESLGRLFAT FFIKLQSVEF LWRQGLCVSV
301: LNGLWISKKW KKVGVGSISV EDFTNISQNV ARRVNGAGAK KIYSSINRTV EDIFEFLNDK VAGTDLRHRL FGKGSVVQIP PVAPLNGKTA GIHKVSGQQA
401: VVQPSPPVPR LNGKIAGTHR KQKVFAQQAV VEPRPPVLPL NGNIAGTHFR HESFRQQAVL QPLPPLRPVN GSIGGTHFRD RLFDQQVLVE PRPLLPPFSG
501: SIAETHFRHR SFPQEAVLDP RPSVQSRNVY SQQLHNNYRN GFSGPPEEHH TKRLCLGNRY RALEETGNWR EEERYEDPRG KRNRYVGNFN GLEEFREIPR
601: FGIHSNPLDD PYRQVPLNAG TNGHLVHHRH DGRYNGEEPM HVGQWQDYTR RVGSPPLQQT PPPYDRVSYE DFRPHLGRSF YH
Arabidopsis Description
Nucleotidyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q7Y216]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.