Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G180400.1 | Wheat | cytosol | 90.21 | 90.05 |
| TraesCS7D01G279400.1 | Wheat | cytosol | 90.04 | 89.88 |
| Os08t0559900-01 | Rice | nucleus | 63.88 | 61.79 |
| OQU80706 | Sorghum | nucleus | 58.9 | 47.97 |
| Zm00001d049928_P005 | Maize | nucleus | 58.36 | 47.54 |
| TraesCS4A01G311100.1 | Wheat | nucleus | 46.8 | 47.3 |
| KRH53978 | Soybean | cytosol | 27.76 | 41.49 |
| Solyc11g044900.1.1 | Tomato | cytosol | 32.56 | 33.15 |
| Bra038277.1-P | Field mustard | cytosol | 26.33 | 32.6 |
| CDX99148 | Canola | cytosol | 26.33 | 32.53 |
| VIT_07s0031g02870.t01 | Wine grape | cytosol | 30.96 | 31.35 |
| CDX86037 | Canola | cytosol | 25.98 | 31.26 |
| PGSC0003DMT400076240 | Potato | nucleus | 32.38 | 29.59 |
| Solyc09g091860.2.1 | Tomato | nucleus | 32.38 | 27.16 |
| AT3G45760.1 | Thale cress | nucleus | 22.6 | 26.79 |
| PGSC0003DMT400059048 | Potato | plastid | 16.37 | 24.73 |
| AT3G45750.1 | Thale cress | cytosol | 26.51 | 21.85 |
| TraesCS3A01G362300.1 | Wheat | nucleus | 15.84 | 13.73 |
| TraesCS6A01G067000.1 | Wheat | cytosol | 13.52 | 12.88 |
| TraesCS1A01G139400.1 | Wheat | nucleus | 11.92 | 8.09 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G280800.1 | EnsemblPlantsGene:TraesCS7A01G280800 | Gene3D:1.10.1410.10 | Gene3D:3.30.460.10 | PANTHER:PTHR12271 | PANTHER:PTHR12271:SF38 |
| SEG:seg | SUPFAM:SSF81301 | SUPFAM:SSF81631 | TIGR:cd05402 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr7A:+:301098239..301117773
Molecular Weight (calculated)
63024.0 Da
IEP (calculated)
9.172
GRAVY (calculated)
-0.266
Length
562 amino acids
Sequence
(BLAST)
(BLAST)
001: MASVTVTPLS APEPEPSARP DNLPRPSVAI SWDTQALCKH AETCELGSEA FLIDPALLPT LEGLLLETYA MLRPKPVEYE QRRTMIDVFN KIAKDIFGKK
101: DDFPVVEPFG SFTMDLFTTK SDLDLSVNFS NDMDGQFARK DKISVIRKFA KVLHKHQSRG RCYGVLPVLS AIVPVLKVTD KGTGVECDIS VENKDGMSRS
201: MIFKLVSSID ERFQILCYLI KFWAKTHDVN CPKDRTMSSM AIISLVAFHL QTRHPPILPA FSGLLKDGAD FASVQRNVVL FKGFGSTNKE SVAELFVSLM
301: SKLLAVKDLW EQGLCASNFD GFWISKTWNR GIGNLSVEDF LDRSQNFARS VGKVEMQNIC ECLKDTVSKL TDFFRGKIDA PTLKILIFGA LNQDVPVSHP
401: SPKHVKSKRK RELRHDPANS EKQQKKVKHA AQRGRAANRI DSILPTPTVF MPHVHQVGST QPFNQIVHPS QLPIPQLSYG LPQAHFHPGP HMIGQPHGSF
501: IYSTDPGIQL QQQARHMFVP LPVHQPAINR SFHPHGFNGA HEVLYDDNSW LPYGINPNYR RV
101: DDFPVVEPFG SFTMDLFTTK SDLDLSVNFS NDMDGQFARK DKISVIRKFA KVLHKHQSRG RCYGVLPVLS AIVPVLKVTD KGTGVECDIS VENKDGMSRS
201: MIFKLVSSID ERFQILCYLI KFWAKTHDVN CPKDRTMSSM AIISLVAFHL QTRHPPILPA FSGLLKDGAD FASVQRNVVL FKGFGSTNKE SVAELFVSLM
301: SKLLAVKDLW EQGLCASNFD GFWISKTWNR GIGNLSVEDF LDRSQNFARS VGKVEMQNIC ECLKDTVSKL TDFFRGKIDA PTLKILIFGA LNQDVPVSHP
401: SPKHVKSKRK RELRHDPANS EKQQKKVKHA AQRGRAANRI DSILPTPTVF MPHVHQVGST QPFNQIVHPS QLPIPQLSYG LPQAHFHPGP HMIGQPHGSF
501: IYSTDPGIQL QQQARHMFVP LPVHQPAINR SFHPHGFNGA HEVLYDDNSW LPYGINPNYR RV
001: MGSRGNVAED KNVSSKVIRK KVNNTVSIAL KRYKIDSYIL LDLDKVLNDV YCSFRPVSAD YNTRKELVKN LNTMALDIYG KSEESSPVLE AYGSFVMDMY
101: SSQSDLDVSI NFGNGTSEIP REKKLEILKR FAKKLRSLQG EGQVKNVESI FSAKVPIVKF SDQGTGVECD LSVENKDGIL NSQIVRIISQ IDGRFQKLCL
201: LVKHWAKAHE VNSALHRTLN SVSITLLVAL HLQTQNPPIL PPFSMLLKDG MDPPNVEKRA QKFLNWGQRN QESLGRLFAT FFIKLQSVEF LWRQGLCVSV
301: LNGLWISKKW KKVGVGSISV EDFTNISQNV ARRVNGAGAK KIYSSINRTV EDIFEFLNDK VAGTDLRHRL FGKGSVVQIP PVAPLNGKTA GIHKVSGQQA
401: VVQPSPPVPR LNGKIAGTHR KQKVFAQQAV VEPRPPVLPL NGNIAGTHFR HESFRQQAVL QPLPPLRPVN GSIGGTHFRD RLFDQQVLVE PRPLLPPFSG
501: SIAETHFRHR SFPQEAVLDP RPSVQSRNVY SQQLHNNYRN GFSGPPEEHH TKRLCLGNRY RALEETGNWR EEERYEDPRG KRNRYVGNFN GLEEFREIPR
601: FGIHSNPLDD PYRQVPLNAG TNGHLVHHRH DGRYNGEEPM HVGQWQDYTR RVGSPPLQQT PPPYDRVSYE DFRPHLGRSF YH
101: SSQSDLDVSI NFGNGTSEIP REKKLEILKR FAKKLRSLQG EGQVKNVESI FSAKVPIVKF SDQGTGVECD LSVENKDGIL NSQIVRIISQ IDGRFQKLCL
201: LVKHWAKAHE VNSALHRTLN SVSITLLVAL HLQTQNPPIL PPFSMLLKDG MDPPNVEKRA QKFLNWGQRN QESLGRLFAT FFIKLQSVEF LWRQGLCVSV
301: LNGLWISKKW KKVGVGSISV EDFTNISQNV ARRVNGAGAK KIYSSINRTV EDIFEFLNDK VAGTDLRHRL FGKGSVVQIP PVAPLNGKTA GIHKVSGQQA
401: VVQPSPPVPR LNGKIAGTHR KQKVFAQQAV VEPRPPVLPL NGNIAGTHFR HESFRQQAVL QPLPPLRPVN GSIGGTHFRD RLFDQQVLVE PRPLLPPFSG
501: SIAETHFRHR SFPQEAVLDP RPSVQSRNVY SQQLHNNYRN GFSGPPEEHH TKRLCLGNRY RALEETGNWR EEERYEDPRG KRNRYVGNFN GLEEFREIPR
601: FGIHSNPLDD PYRQVPLNAG TNGHLVHHRH DGRYNGEEPM HVGQWQDYTR RVGSPPLQQT PPPYDRVSYE DFRPHLGRSF YH
Arabidopsis Description
Nucleotidyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q7Y216]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.