Factsheet for Bra038277.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX99148	Canola	cytosol	98.02	97.8
AT3G45760.1	Thale cress	nucleus	53.52	51.27
AT3G45750.1	Thale cress	cytosol	63.22	42.08
KRH53978	Soybean	cytosol	32.38	39.1
Os09t0570600-01	Rice	cytosol	24.23	35.48
Zm00001d019808_P003	Maize	cytosol	18.94	33.46
VIT_07s0031g02870.t01	Wine grape	cytosol	36.12	29.55
OQU89042	Sorghum	cytosol	31.5	28.71
Solyc11g044900.1.1	Tomato	cytosol	34.58	28.44
TraesCS4B01G003200.1	Wheat	nucleus	34.58	27.69
TraesCS4A01G311100.1	Wheat	nucleus	33.7	27.52
TraesCS4D01G002900.1	Wheat	nucleus, peroxisome, plastid	33.7	27.27
HORVU4Hr1G000070.38	Barley	cytosol	34.14	26.77
Os08t0559900-01	Rice	nucleus	33.92	26.51
TraesCS7A01G280800.1	Wheat	cytosol	32.6	26.33
TraesCS7B01G180400.1	Wheat	cytosol	32.16	25.93
TraesCS7D01G279400.1	Wheat	cytosol	32.16	25.93
PGSC0003DMT400076240	Potato	nucleus	35.02	25.85
PGSC0003DMT400059048	Potato	plastid	20.48	25.0
Solyc09g091860.2.1	Tomato	nucleus	35.68	24.18
OQU80706	Sorghum	nucleus	35.02	23.04
Zm00001d049928_P005	Maize	nucleus	33.26	21.88
Bra017054.1-P	Field mustard	cytosol	19.16	17.23
Bra039325.1-P	Field mustard	nucleus	18.72	11.18
Zm00001d019809_P001	Maize	mitochondrion	7.71	10.67

Protein Annotations

EnsemblPlants:Bra038277.1	EnsemblPlants:Bra038277.1-P	EnsemblPlantsGene:Bra038277	Gene3D:1.10.1410.10	Gene3D:3.30.460.10	PANTHER:PTHR12271
PANTHER:PTHR12271:SF38	SEG:seg	SUPFAM:SSF81301	SUPFAM:SSF81631	UniParc:UPI000253EE96	UniProt:M4FB11
MapMan:35.1	:	:	:	:	:

Description

AT3G45750 (E=2e-145) | unknown protein

Coordinates

chrA06:+:11360980..11363282

Molecular Weight (calculated)

51430.5 Da

IEP (calculated)

8.225

GRAVY (calculated)

-0.381

Length

454 amino acids

Sequence
(BLAST)

001: MDSRSGVAEE NTVSSKGIRK KVKNSESVAL QRYKIDTYNL VDLDKVLNDV YCSCRPVSAD YEARKDTLKH INALAFDIYG DSKGDRPVLK AYGSFAMDMF
101: FARSDLDVSI NFGDGVSELP RDSKLQILER FAEKLHSLQG EGHVRNVVSI LSARVPIVRF LDQRTCVECD LAVDSKEGVL NSRIIQIISQ IDDRFHKLCL
201: LIKHWAKAHD VNSALSNTLN SISITLLVAH HLQTQDPPIL PPFSLLFKDG VDPPNVEKRT QEFLNKEKRN KESLGRLFVT FFVKLQSVEF LWRQGLCVSL
301: RSGLWISKRW RRAGVGINVE DFLDVSQNVA RVVNDRGAKK IYSSINQTVE ELFEFLNGKI DGAHLKDKLF VPQPLVEPPL VPQVEVYHQP PHHNYRCDEF
401: KGHHNKRPRF GNGGEEPIHA AGDDSHAIDL PPPPPPFGRV YRIYCDKFGP QNLP

Best Arabidopsis Sequence Match ( AT3G45750.1 )
(BLAST)

001: MGSRGNVAED KNVSSKVIRK KVNNTVSIAL KRYKIDSYIL LDLDKVLNDV YCSFRPVSAD YNTRKELVKN LNTMALDIYG KSEESSPVLE AYGSFVMDMY
101: SSQSDLDVSI NFGNGTSEIP REKKLEILKR FAKKLRSLQG EGQVKNVESI FSAKVPIVKF SDQGTGVECD LSVENKDGIL NSQIVRIISQ IDGRFQKLCL
201: LVKHWAKAHE VNSALHRTLN SVSITLLVAL HLQTQNPPIL PPFSMLLKDG MDPPNVEKRA QKFLNWGQRN QESLGRLFAT FFIKLQSVEF LWRQGLCVSV
301: LNGLWISKKW KKVGVGSISV EDFTNISQNV ARRVNGAGAK KIYSSINRTV EDIFEFLNDK VAGTDLRHRL FGKGSVVQIP PVAPLNGKTA GIHKVSGQQA
401: VVQPSPPVPR LNGKIAGTHR KQKVFAQQAV VEPRPPVLPL NGNIAGTHFR HESFRQQAVL QPLPPLRPVN GSIGGTHFRD RLFDQQVLVE PRPLLPPFSG
501: SIAETHFRHR SFPQEAVLDP RPSVQSRNVY SQQLHNNYRN GFSGPPEEHH TKRLCLGNRY RALEETGNWR EEERYEDPRG KRNRYVGNFN GLEEFREIPR
601: FGIHSNPLDD PYRQVPLNAG TNGHLVHHRH DGRYNGEEPM HVGQWQDYTR RVGSPPLQQT PPPYDRVSYE DFRPHLGRSF YH

Arabidopsis Description

Nucleotidyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q7Y216]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.