Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038277.1-P | Field mustard | cytosol | 42.08 | 63.22 |
| CDX99148 | Canola | cytosol | 41.94 | 62.86 |
| CDX86037 | Canola | cytosol | 41.35 | 60.39 |
| AT3G45760.1 | Thale cress | nucleus | 40.76 | 58.65 |
| KRH53978 | Soybean | cytosol | 22.73 | 41.22 |
| Zm00001d019808_P003 | Maize | cytosol | 13.78 | 36.58 |
| Os09t0570600-01 | Rice | cytosol | 16.28 | 35.81 |
| OQU89042 | Sorghum | cytosol | 23.31 | 31.93 |
| VIT_07s0031g02870.t01 | Wine grape | cytosol | 24.63 | 30.27 |
| TraesCS4A01G311100.1 | Wheat | nucleus | 24.49 | 30.04 |
| TraesCS4B01G003200.1 | Wheat | nucleus | 24.78 | 29.81 |
| Solyc11g044900.1.1 | Tomato | cytosol | 23.31 | 28.8 |
| TraesCS4D01G002900.1 | Wheat | nucleus, peroxisome, plastid | 23.46 | 28.52 |
| HORVU4Hr1G000070.38 | Barley | cytosol | 23.9 | 28.15 |
| PGSC0003DMT400076240 | Potato | nucleus | 24.93 | 27.64 |
| Os08t0559900-01 | Rice | nucleus | 23.17 | 27.19 |
| TraesCS7A01G280800.1 | Wheat | cytosol | 21.85 | 26.51 |
| TraesCS7B01G180400.1 | Wheat | cytosol | 21.41 | 25.93 |
| TraesCS7D01G279400.1 | Wheat | cytosol | 21.41 | 25.93 |
| Solyc09g091860.2.1 | Tomato | nucleus | 24.93 | 25.37 |
| PGSC0003DMT400059048 | Potato | plastid | 13.64 | 25.0 |
| OQU80706 | Sorghum | nucleus | 22.73 | 22.46 |
| Zm00001d049928_P005 | Maize | nucleus | 22.58 | 22.32 |
| AT2G39740.1 | Thale cress | cytosol | 13.34 | 17.81 |
| AT2G45620.1 | Thale cress | nucleus | 11.73 | 10.47 |
| Zm00001d019809_P001 | Maize | mitochondrion | 4.11 | 8.54 |
Protein Annotations
| Gene3D:1.10.1410.10 | Gene3D:3.30.460.10 | MapMan:35.1 | EntrezGene:823717 | ProteinID:AEE78066.1 | EMBL:AK229682 |
| ProteinID:ANM64895.1 | ArrayExpress:AT3G45750 | EnsemblPlantsGene:AT3G45750 | RefSeq:AT3G45750 | TAIR:AT3G45750 | RefSeq:AT3G45750-TAIR-G |
| EnsemblPlants:AT3G45750.1 | TAIR:AT3G45750.1 | Unigene:At.35992 | EMBL:BT008622 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0016740 | RefSeq:NP_001326897.1 | RefSeq:NP_190161.2 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR12271 | PANTHER:PTHR12271:SF38 | UniProt:Q7Y216 | SUPFAM:SSF81301 | SUPFAM:SSF81631 | UniParc:UPI000019AB08 |
| SEG:seg | : | : | : | : | : |
Description
Nucleotidyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q7Y216]
Coordinates
chr3:-:16793515..16797933
Molecular Weight (calculated)
77239.3 Da
IEP (calculated)
10.202
GRAVY (calculated)
-0.556
Length
682 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRGNVAED KNVSSKVIRK KVNNTVSIAL KRYKIDSYIL LDLDKVLNDV YCSFRPVSAD YNTRKELVKN LNTMALDIYG KSEESSPVLE AYGSFVMDMY
101: SSQSDLDVSI NFGNGTSEIP REKKLEILKR FAKKLRSLQG EGQVKNVESI FSAKVPIVKF SDQGTGVECD LSVENKDGIL NSQIVRIISQ IDGRFQKLCL
201: LVKHWAKAHE VNSALHRTLN SVSITLLVAL HLQTQNPPIL PPFSMLLKDG MDPPNVEKRA QKFLNWGQRN QESLGRLFAT FFIKLQSVEF LWRQGLCVSV
301: LNGLWISKKW KKVGVGSISV EDFTNISQNV ARRVNGAGAK KIYSSINRTV EDIFEFLNDK VAGTDLRHRL FGKGSVVQIP PVAPLNGKTA GIHKVSGQQA
401: VVQPSPPVPR LNGKIAGTHR KQKVFAQQAV VEPRPPVLPL NGNIAGTHFR HESFRQQAVL QPLPPLRPVN GSIGGTHFRD RLFDQQVLVE PRPLLPPFSG
501: SIAETHFRHR SFPQEAVLDP RPSVQSRNVY SQQLHNNYRN GFSGPPEEHH TKRLCLGNRY RALEETGNWR EEERYEDPRG KRNRYVGNFN GLEEFREIPR
601: FGIHSNPLDD PYRQVPLNAG TNGHLVHHRH DGRYNGEEPM HVGQWQDYTR RVGSPPLQQT PPPYDRVSYE DFRPHLGRSF YH
101: SSQSDLDVSI NFGNGTSEIP REKKLEILKR FAKKLRSLQG EGQVKNVESI FSAKVPIVKF SDQGTGVECD LSVENKDGIL NSQIVRIISQ IDGRFQKLCL
201: LVKHWAKAHE VNSALHRTLN SVSITLLVAL HLQTQNPPIL PPFSMLLKDG MDPPNVEKRA QKFLNWGQRN QESLGRLFAT FFIKLQSVEF LWRQGLCVSV
301: LNGLWISKKW KKVGVGSISV EDFTNISQNV ARRVNGAGAK KIYSSINRTV EDIFEFLNDK VAGTDLRHRL FGKGSVVQIP PVAPLNGKTA GIHKVSGQQA
401: VVQPSPPVPR LNGKIAGTHR KQKVFAQQAV VEPRPPVLPL NGNIAGTHFR HESFRQQAVL QPLPPLRPVN GSIGGTHFRD RLFDQQVLVE PRPLLPPFSG
501: SIAETHFRHR SFPQEAVLDP RPSVQSRNVY SQQLHNNYRN GFSGPPEEHH TKRLCLGNRY RALEETGNWR EEERYEDPRG KRNRYVGNFN GLEEFREIPR
601: FGIHSNPLDD PYRQVPLNAG TNGHLVHHRH DGRYNGEEPM HVGQWQDYTR RVGSPPLQQT PPPYDRVSYE DFRPHLGRSF YH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.