Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG33685 | Sorghum | nucleus | 74.53 | 71.69 |
| Os01t0846450-01 | Rice | cytosol | 22.38 | 63.11 |
| TraesCS3B01G394800.1 | Wheat | nucleus | 51.46 | 46.07 |
| TraesCS3D01G356000.1 | Wheat | nucleus | 51.64 | 45.59 |
| Solyc06g051780.2.1 | Tomato | cytosol | 18.76 | 45.42 |
| TraesCS3A01G362300.1 | Wheat | nucleus | 49.91 | 44.75 |
| GSMUA_Achr6P34020_001 | Banana | cytosol | 32.01 | 44.29 |
| PGSC0003DMT400061199 | Potato | cytosol | 19.97 | 41.43 |
| KRG97851 | Soybean | cytosol | 25.47 | 35.66 |
| VIT_13s0019g02230.t01 | Wine grape | cytosol | 25.65 | 32.89 |
| KRH31028 | Soybean | cytosol | 24.61 | 31.43 |
| Bra017054.1-P | Field mustard | cytosol | 26.51 | 30.5 |
| CDY07030 | Canola | cytosol | 26.51 | 30.5 |
| AT2G39740.1 | Thale cress | cytosol | 26.51 | 30.14 |
| CDX93239 | Canola | cytosol | 25.82 | 29.7 |
| Zm00001d019808_P003 | Maize | cytosol | 9.81 | 22.18 |
| Zm00001d049928_P005 | Maize | nucleus | 15.66 | 13.19 |
| Zm00001d015059_P001 | Maize | nucleus | 11.88 | 11.37 |
| Zm00001d014321_P007 | Maize | plastid | 11.53 | 8.49 |
| Zm00001d019809_P001 | Maize | mitochondrion | 3.61 | 6.4 |
Protein Annotations
| EnsemblPlants:Zm00001d042885_P006 | EnsemblPlants:Zm00001d042885_T006 | EnsemblPlantsGene:Zm00001d042885 | EntrezGene:100383526 | Gene3D:1.10.1410.10 | Gene3D:3.30.460.10 |
| PANTHER:PTHR12271 | PANTHER:PTHR12271:SF94 | ProteinID:ONM36487.1 | SUPFAM:SSF81301 | SUPFAM:SSF81631 | UniParc:UPI0004DE815E |
| UniProt:A0A1D6N7B0 | MapMan:16.10.2.6.1 | : | : | : | : |
Description
Protein HESO1
Coordinates
chr3:-:182852880..182858783
Molecular Weight (calculated)
65509.5 Da
IEP (calculated)
9.739
GRAVY (calculated)
-0.565
Length
581 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDSVHDNIV LNKCIKDILA LIKPVEDDRS KRLSTIQELE NCIHSLASLS GAAVKPFGSF VSDLYSKSGD LDLSVQFGNG SNHPINKKKK QNALRDVRKA
101: LLSRGVTGYM QMQFIPHARV PVLQYVSKQF GISCDISIGN FAGRIKSKIF YWVNTVDERF GDMVLLIKEW AKAQNINDPK SGTLNSYSLC LLVLYHFQTS
201: EPPILPPLNE IYEGNIAGDV TEAALFDEQH LDEVCAANIE RFRLQNKGRR NETSTCRLLG TFFQKFAHIN ALTDNVISTY SGQIERIQNN PSWMRKSYHL
301: FVGMPMHLVE DPVERPDNAA RAVSMKGLDL IAIAFNDACH KFKSLEHIDR NELLALLCTP VVRLKLGVRV RENSYPKSPR NNVHSRIRGQ MWRDRGQAPS
401: ARGFTGTRSV HENPLANTTA HETAVQYHNH VQPTTVRQTA IRNQVTNTAV HQTAPYQNHT ARQVYPTWSQ TAEPYQNHNQ QVYATGFQTG PYQSHNQVHA
501: YRAGLPPGGI YEIHNQQVYN AGFQTDGPHQ NQQRRKGYPS NHQNNRLSAT AARYEPVRGQ FNNGSTWDSR SQAPGSAALR R
101: LLSRGVTGYM QMQFIPHARV PVLQYVSKQF GISCDISIGN FAGRIKSKIF YWVNTVDERF GDMVLLIKEW AKAQNINDPK SGTLNSYSLC LLVLYHFQTS
201: EPPILPPLNE IYEGNIAGDV TEAALFDEQH LDEVCAANIE RFRLQNKGRR NETSTCRLLG TFFQKFAHIN ALTDNVISTY SGQIERIQNN PSWMRKSYHL
301: FVGMPMHLVE DPVERPDNAA RAVSMKGLDL IAIAFNDACH KFKSLEHIDR NELLALLCTP VVRLKLGVRV RENSYPKSPR NNVHSRIRGQ MWRDRGQAPS
401: ARGFTGTRSV HENPLANTTA HETAVQYHNH VQPTTVRQTA IRNQVTNTAV HQTAPYQNHT ARQVYPTWSQ TAEPYQNHNQ QVYATGFQTG PYQSHNQVHA
501: YRAGLPPGGI YEIHNQQVYN AGFQTDGPHQ NQQRRKGYPS NHQNNRLSAT AARYEPVRGQ FNNGSTWDSR SQAPGSAALR R
001: MSRNPFLDPT LQEILQVIKP TRADRDTRIT VIDQLRDVLQ SVECLRGATV QPFGSFVSNL FTRWGDLDIS VDLFSGSSIL FTGKKQKQTL LGHLLRALRA
101: SGLWYKLQFV IHARVPILKV VSGHQRISCD ISIDNLDGLL KSRFLFWISE IDGRFRDLVL LVKEWAKAHN INDSKTGTFN SYSLSLLVIF HFQTCVPAIL
201: PPLRVIYPKS AVDDLTGVRK TAEESIAQVT AANIARFKSE RAKSVNRSSL SELLVSFFAK FSDINVKAQE FGVCPFTGRW ETISSNTTWL PKTYSLFVED
301: PFEQPVNAAR SVSRRNLDRI AQVFQITSRR LVSECNRNSI IGILTGQHIQ ESLYRTISLP SQHHANGMHN VRNLHGQARP QNQQMQQNWS QSYNTPNPPH
401: WPPLTQSRPQ QNWTQNNPRN LQGQPPVQGQ TWPVITQTQT QQKSPYKSGN RPLKNTSAGS SQNQGHIGKP SGHMNGVNSA RPAYTNGVNS ARPPSKIPSQ
501: GGQIWRPRHE Q
101: SGLWYKLQFV IHARVPILKV VSGHQRISCD ISIDNLDGLL KSRFLFWISE IDGRFRDLVL LVKEWAKAHN INDSKTGTFN SYSLSLLVIF HFQTCVPAIL
201: PPLRVIYPKS AVDDLTGVRK TAEESIAQVT AANIARFKSE RAKSVNRSSL SELLVSFFAK FSDINVKAQE FGVCPFTGRW ETISSNTTWL PKTYSLFVED
301: PFEQPVNAAR SVSRRNLDRI AQVFQITSRR LVSECNRNSI IGILTGQHIQ ESLYRTISLP SQHHANGMHN VRNLHGQARP QNQQMQQNWS QSYNTPNPPH
401: WPPLTQSRPQ QNWTQNNPRN LQGQPPVQGQ TWPVITQTQT QQKSPYKSGN RPLKNTSAGS SQNQGHIGKP SGHMNGVNSA RPAYTNGVNS ARPPSKIPSQ
501: GGQIWRPRHE Q
Arabidopsis Description
HESO1Protein HESO1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XET5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.