Factsheet for Solyc06g051780.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc05g040050.1.1
Solyc07g047690.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39740.1	Solyc05g040050.1.1	AT2G05230.1	21798944
AT2G39740.1	Solyc07g047690.1.1	AT2G05230.1	21798944
AT2G39740.1	Solyc05g040050.1.1	AT2G05250.1	21798944
AT2G39740.1	Solyc07g047690.1.1	AT2G05250.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400061199	Potato	cytosol	86.25	73.93
Os01t0846450-01	Rice	cytosol	41.25	48.06
KRG97851	Soybean	cytosol	65.42	37.83
VIT_13s0019g02230.t01	Wine grape	cytosol	64.58	34.22
KRH31028	Soybean	cytosol	63.75	33.63
Os01t0846500-02	Rice	cytosol	47.92	30.18
GSMUA_Achr6P34020_001	Banana	cytosol	51.25	29.29
AT2G39740.1	Thale cress	cytosol	59.58	27.98
Bra017054.1-P	Field mustard	cytosol	56.25	26.73
CDY07030	Canola	cytosol	56.25	26.73
CDX93239	Canola	cytosol	56.25	26.73
OQU87849	Sorghum	cytosol	47.5	22.49
TraesCS3B01G394900.1	Wheat	cytosol	45.0	22.27
Zm00001d042885_P006	Maize	nucleus	45.42	18.76
KXG33685	Sorghum	nucleus	45.0	17.88
TraesCS3B01G394800.1	Wheat	nucleus	44.58	16.49
TraesCS3A01G362300.1	Wheat	nucleus	43.75	16.2
TraesCS3D01G356000.1	Wheat	nucleus	44.17	16.11
Solyc11g044900.1.1	Tomato	cytosol	28.75	12.5
Solyc09g091860.2.1	Tomato	nucleus	30.0	10.75
Solyc01g094000.2.1	Tomato	nucleus	22.92	7.1

Protein Annotations

EnsemblPlants:Solyc06g051780.2.1	EnsemblPlantsGene:Solyc06g051780.2	Gene3D:1.10.1410.10	Gene3D:3.30.460.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016779	InterPro:Polymerase_NTP_transf_dom	PANTHER:PTHR12271	PANTHER:PTHR12271:SF94	PFAM:PF01909
SEG:seg	SUPFAM:SSF81301	SUPFAM:SSF81631	UniParc:UPI00027670D7	UniProt:K4C5W7	MapMan:16.10.2.6.1

Description

No Description!

Coordinates

chr6:+:35440414..35456330

Molecular Weight (calculated)

26893.7 Da

IEP (calculated)

7.539

GRAVY (calculated)

0.044

Length

240 amino acids

Sequence
(BLAST)

001: MNGYSLLEHT LQNILHSINP SEEDWSMRFQ LIHELRAVVE SIEILRGATV EPFGSFVSNL FTRWGDVDIS IELPNGLHIS AAGKKYKLSL LGDVLKALRA
101: KGGCRKLQFI TNARVPILKF QGNNNISCDI SINNLSGQMK SKILYWINMI DGRFRDMVLL VKEWAKAHNI NDSKTGTLNS YSLSLLVVFH LQTCVPAILP
201: PLKEIYPGSM VDDLTVILSI CEHESQSVWP PGSPCSWAWA

Best Arabidopsis Sequence Match ( AT2G39740.3 )
(BLAST)

001: MSRNPFLDPT LQEILQVIKP TRADRDTRIT VIDQLRDVLQ SVECLRGATV QPFGSFVSNL FTRWGDLDIS VDLFSGSSIL FTGKKQKQTL LGHLLRALRA
101: SGLWYKLQFV IHARVPILKV VSGHQRISCD ISIDNLDGLL KSRFLFWISE IDGRFRDLVL LVKEWAKAHN INDSKTGTFN SYSLSLLVIF HFQTCVPAIL
201: PPLRVIYPKS AVDDLTGVRK TAEESIAQVT AANIARFKSE RAKSVNRSSL SELLVSFFAK FSDINVKAQE FGVCPFTGRW ETISSNTTWL PKTYSLFVED
301: PFEQPVNAAR SVSRRNLDRI AQVFQITSRR LVSECNRNSI IGILTGQHIQ ESLYRTISLP SQHHANGMHN VRNLHGQARP QNQQMQQNWS QSYNTPNPPH
401: WPPLTQSRPQ QNWTQNNPRN LQGQPPVQGQ TWPVITQTQT QQKSPYKSGN RPLKNTSAGS SQNQGHIGKP SGHMNGVNSA RPAYTNGVNS ARPPSKIPSQ
501: GGQIWRPRHE Q

Arabidopsis Description

HESO1Protein HESO1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XET5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.