Factsheet for Os01t0846500-02

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0923800-01
Os02t0510000-01
Os03t0401200-01
Os04t0388800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39740.1	Os01t0923800-01	AT2G05230.1	21798944
AT2G39740.1	Os02t0510000-01	AT2G05230.1	21798944
AT2G39740.1	Os03t0401200-01	AT2G05230.1	21798944
AT2G39740.1	Os04t0388800-01	AT2G05230.1	21798944
AT2G39740.1	Os01t0923800-01	AT2G05250.1	21798944
AT2G39740.1	Os02t0510000-01	AT2G05250.1	21798944
AT2G39740.1	Os03t0401200-01	AT2G05250.1	21798944
AT2G39740.1	Os04t0388800-01	AT2G05250.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0846450-01	Rice	cytosol	36.48	67.48
Solyc06g051780.2.1	Tomato	cytosol	30.18	47.92
OQU87849	Sorghum	cytosol	63.25	47.53
GSMUA_Achr6P34020_001	Banana	cytosol	50.66	45.95
PGSC0003DMT400061199	Potato	cytosol	32.02	43.57
KRG97851	Soybean	cytosol	39.9	36.63
VIT_13s0019g02230.t01	Wine grape	cytosol	42.26	35.54
KRH31028	Soybean	cytosol	39.9	33.41
AT2G39740.1	Thale cress	cytosol	41.99	31.31
CDX93239	Canola	cytosol	41.47	31.29
Bra017054.1-P	Field mustard	cytosol	40.94	30.89
CDY07030	Canola	cytosol	40.94	30.89
Os02t0122100-00	Rice	cytosol	18.37	19.07
Os09t0570600-01	Rice	cytosol	14.96	18.39
Os10t0188300-01	Rice	cytosol, nucleus, plastid	17.59	18.01
Os08t0559900-01	Rice	nucleus	23.1	15.15

Protein Annotations

EnsemblPlants:Os01t0846500-02	EnsemblPlantsGene:Os01g0846500	EntrezGene:4327467	Gene3D:1.10.1410.10	Gene3D:3.30.460.10	PANTHER:PTHR12271
PANTHER:PTHR12271:SF94	ProteinID:BAD81828.1	ProteinID:BAD82657.1	ProteinID:BAF06704.1	ProteinID:BAS75203.1	ProteinID:EEE55664.1
RefSeq:XP_015626517.1	SEG:seg	SUPFAM:SSF81301	SUPFAM:SSF81631	UniParc:UPI000049E8C0	UniProt:Q5N789
MapMan:16.10.2.6.1	:	:	:	:	:

Description

Hypothetical conserved gene. (Os01t0846500-01);PAP/25A core domain containing protein. (Os01t0846500-02)

Coordinates

chr1:+:36359740..36365448

Molecular Weight (calculated)

43392.8 Da

IEP (calculated)

8.710

GRAVY (calculated)

-0.327

Length

381 amino acids

Sequence
(BLAST)

001: MSIWRVPNYD VLEKCTEDIL SLIKPVEGDR NKRIYAIQEL ADTIYSAGAL RGASVKPFGS FVSQLYAKSG DLDVSVELFN ALNLPISKRK KQDTLREVRR
101: ALQKRGIARH MEFIPNARVP VLQYVSNQYG ISCDISISNY PGRIKSKIFY WINTLDDRFG DMVLLVKEWA KAQNINDPKN GTLNSYSLCL LVLFHFQTCE
201: PAILPPLKEI YEGNIMEDIS GRAYYNEKHL DEVCSINIER FRRQNMGQRN QSSLSHLLAS FFHKFFRIDA LSDKVISTYT GRLERIQDNP RWMDKSYSLF
301: VEDPFEKPDN AARAVGSFEF QDIVNAFSNA SNKFVSDAHA LTDRNGLLSL LCTPDVGSKL GGRASASRYT NTLVSPHDRF L

Best Arabidopsis Sequence Match ( AT2G39740.3 )
(BLAST)

001: MSRNPFLDPT LQEILQVIKP TRADRDTRIT VIDQLRDVLQ SVECLRGATV QPFGSFVSNL FTRWGDLDIS VDLFSGSSIL FTGKKQKQTL LGHLLRALRA
101: SGLWYKLQFV IHARVPILKV VSGHQRISCD ISIDNLDGLL KSRFLFWISE IDGRFRDLVL LVKEWAKAHN INDSKTGTFN SYSLSLLVIF HFQTCVPAIL
201: PPLRVIYPKS AVDDLTGVRK TAEESIAQVT AANIARFKSE RAKSVNRSSL SELLVSFFAK FSDINVKAQE FGVCPFTGRW ETISSNTTWL PKTYSLFVED
301: PFEQPVNAAR SVSRRNLDRI AQVFQITSRR LVSECNRNSI IGILTGQHIQ ESLYRTISLP SQHHANGMHN VRNLHGQARP QNQQMQQNWS QSYNTPNPPH
401: WPPLTQSRPQ QNWTQNNPRN LQGQPPVQGQ TWPVITQTQT QQKSPYKSGN RPLKNTSAGS SQNQGHIGKP SGHMNGVNSA RPAYTNGVNS ARPPSKIPSQ
501: GGQIWRPRHE Q

Arabidopsis Description

HESO1Protein HESO1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XET5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.