CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH14137
KRH73997

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39740.1	KRH14137	AT2G05230.1	21798944
AT2G39740.1	KRH73997	AT2G05230.1	21798944
AT2G39740.1	KRH14137	AT2G05250.1	21798944
AT2G39740.1	KRH73997	AT2G05250.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97851	Soybean	cytosol	82.42	90.36
Solyc06g051780.2.1	Tomato	cytosol	33.63	63.75
PGSC0003DMT400061199	Potato	cytosol	35.82	58.21
VIT_13s0019g02230.t01	Wine grape	cytosol	49.89	50.11
Os01t0846450-01	Rice	cytosol	20.44	45.15
AT2G39740.1	Thale cress	cytosol	45.27	40.31
Os01t0846500-02	Rice	cytosol	33.41	39.9
GSMUA_Achr6P34020_001	Banana	cytosol	36.7	39.76
CDX93239	Canola	cytosol	43.3	39.01
CDY07030	Canola	cytosol	43.08	38.81
Bra017054.1-P	Field mustard	cytosol	42.86	38.61
OQU87849	Sorghum	cytosol	34.73	31.16
TraesCS3B01G394900.1	Wheat	cytosol	30.99	29.07
Zm00001d042885_P006	Maize	nucleus	31.43	24.61
KXG33685	Sorghum	nucleus	31.87	24.01
TraesCS3A01G362300.1	Wheat	nucleus	31.87	22.38
TraesCS3B01G394800.1	Wheat	nucleus	31.87	22.34
KRH53978	Soybean	cytosol	18.46	22.34
TraesCS3D01G356000.1	Wheat	nucleus	32.09	22.19
KRH48314	Soybean	endoplasmic reticulum	15.16	9.43
KRH65203	Soybean	nucleus	14.73	9.17

Protein Annotations

EMBL:ACUP02007119	EnsemblPlants:KRH31028	EnsemblPlantsGene:GLYMA_11G222700	EntrezGene:100791794	Gene3D:1.10.1410.10	Gene3D:3.30.460.10
PANTHER:PTHR12271	PANTHER:PTHR12271:SF94	ProteinID:KRH31028	ProteinID:KRH31028.1	ProteinID:KRH31029.1	SEG:seg
SUPFAM:SSF81301	SUPFAM:SSF81631	UniParc:UPI00023CC713	UniProt:I1LMI9	MapMan:16.10.2.6.1	:

Description

hypothetical protein

Coordinates

chr11:-:31776993..31783480

Molecular Weight (calculated)

51098.4 Da

IEP (calculated)

10.161

GRAVY (calculated)

-0.291

Length

455 amino acids

Sequence
(BLAST)

001: MSTHSMLDIV VNDILRVVTP LQEDWEIRFA IINDFRSIVE SVESLRGATV EPYGSFVSNL FTRWGDLDIS IELSNGLHIS SAGKKQKQTL LGEVLKALRM
101: KGGGSNLQFI SNARVPILKF KSYRQGVSCD ISINNLPGQM KSKILLWINK IDGRFRHMVL LVKEWAKAHK INNSKAGTFN SYSLSLLVIF YFQTCIPAIF
201: PPLKDIYPGN MIDDLIGIRS DAENLIAETC DANINRFISN RARSINRKSV AELFVDFVGK FAKMDSMAVE MGICPYTGKW EQIEDNMIWL PKTYAIFVED
301: PFEQPQNTAR SVSAGQLKKI TETFARTHDL LTSTNQNQIS LLSNLAPAHV IRCITRPYGG GYIHPTQPQV QRGVAYFHPT QPQVFRPTQP QVQRAIRPLQ
401: PQSQHHFQNA SQGTSSNSSF STGQIQARKG VSSNSSSSKG HTPVHRGQQM WRPKS

Best Arabidopsis Sequence Match ( AT2G39740.3 )
(BLAST)

001: MSRNPFLDPT LQEILQVIKP TRADRDTRIT VIDQLRDVLQ SVECLRGATV QPFGSFVSNL FTRWGDLDIS VDLFSGSSIL FTGKKQKQTL LGHLLRALRA
101: SGLWYKLQFV IHARVPILKV VSGHQRISCD ISIDNLDGLL KSRFLFWISE IDGRFRDLVL LVKEWAKAHN INDSKTGTFN SYSLSLLVIF HFQTCVPAIL
201: PPLRVIYPKS AVDDLTGVRK TAEESIAQVT AANIARFKSE RAKSVNRSSL SELLVSFFAK FSDINVKAQE FGVCPFTGRW ETISSNTTWL PKTYSLFVED
301: PFEQPVNAAR SVSRRNLDRI AQVFQITSRR LVSECNRNSI IGILTGQHIQ ESLYRTISLP SQHHANGMHN VRNLHGQARP QNQQMQQNWS QSYNTPNPPH
401: WPPLTQSRPQ QNWTQNNPRN LQGQPPVQGQ TWPVITQTQT QQKSPYKSGN RPLKNTSAGS SQNQGHIGKP SGHMNGVNSA RPAYTNGVNS ARPPSKIPSQ
501: GGQIWRPRHE Q

Arabidopsis Description

HESO1Protein HESO1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XET5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.