Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d042885_P006 | Maize | nucleus | 71.69 | 74.53 |
| Os01t0846450-01 | Rice | cytosol | 21.52 | 63.11 |
| TraesCS3B01G394800.1 | Wheat | nucleus | 52.81 | 49.15 |
| TraesCS3D01G356000.1 | Wheat | nucleus | 53.48 | 49.09 |
| TraesCS3A01G362300.1 | Wheat | nucleus | 52.48 | 48.92 |
| OQU87849 | Sorghum | cytosol | 39.24 | 46.75 |
| Solyc06g051780.2.1 | Tomato | cytosol | 17.88 | 45.0 |
| GSMUA_Achr6P34020_001 | Banana | cytosol | 28.97 | 41.67 |
| PGSC0003DMT400061199 | Potato | cytosol | 19.04 | 41.07 |
| KRG97851 | Soybean | cytosol | 24.17 | 35.18 |
| VIT_13s0019g02230.t01 | Wine grape | cytosol | 24.67 | 32.89 |
| KRH31028 | Soybean | cytosol | 24.01 | 31.87 |
| AT2G39740.1 | Thale cress | cytosol | 25.5 | 30.14 |
| Bra017054.1-P | Field mustard | cytosol | 25.0 | 29.9 |
| CDY07030 | Canola | cytosol | 25.0 | 29.9 |
| CDX93239 | Canola | cytosol | 24.67 | 29.5 |
| KXG32580 | Sorghum | cytosol | 8.94 | 23.18 |
| OQU89042 | Sorghum | cytosol | 14.07 | 17.07 |
| OQU80706 | Sorghum | nucleus | 15.56 | 13.62 |
| OQU84248 | Sorghum | nucleus | 11.09 | 10.36 |
| KXG38754 | Sorghum | plastid | 7.45 | 6.39 |
Protein Annotations
| EnsemblPlants:KXG33685 | EnsemblPlantsGene:SORBI_3003G354100 | Gene3D:1.10.1410.10 | Gene3D:3.30.460.10 | PANTHER:PTHR12271 | PANTHER:PTHR12271:SF94 |
| ProteinID:KXG33685 | ProteinID:KXG33685.1 | SEG:seg | SUPFAM:SSF81301 | SUPFAM:SSF81631 | UniParc:UPI00081AC4D0 |
| UniProt:A0A1B6Q6Z3 | MapMan:16.10.2.6.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:67281611..67286572
Molecular Weight (calculated)
68031.8 Da
IEP (calculated)
9.472
GRAVY (calculated)
-0.654
Length
604 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSVFSDAD FSMVDSVHDN IVLNKCIKDI LALIKPVEDD RSRRLSTIQE LENCIHSQAS LSGAAVKPFG SFVSDLYSKS GDLDLSIQLW NGSNHPINKR
101: KKQNTLREVR KTLLSQGVTG YMQFIPHARV PVLQYVSNRF GISCDISIDN FAGRIKSKIF YWINTLDERF GDMVLLIKEW AKAQNINDPK SGSLNSYSLC
201: LLVLFHFQTS DPPILPPLNE IYEGNIAGDV TALYNEQHLD EVCAANIARF RLQNKGRRNE TSICRLLGTF FQKFARINAF TDNVISTYSG QIGRIQDDPS
301: WMTKSYHLFV EDPVERPDNA ARAVSMKGLD RIASAFNDAC HKFNSLEHID RNELLALLCT PVVGLKLGGK VIANSYQKTP QRNNQHTTTG GRAGRDQGQA
401: PRARGFAGIR PVHKDPLANT TAHETAVQYH NHQQATTVRQ TAIPYPGRNP QTHTTVHQTT PYQNHTVPQV YPTWPQTAEP YHNHNQQVYA TGLQTGPYQS
501: HNQVYAPRFQ TGPYQSRHHQ VYRAGLQPGG TYQIHNQHQQ VYNAGFQTDG PHQNQQRRKG YTPNHQTNRY TAMAARYEPV RGQFNNGSTR DSKSQAADTA
601: ASQR
101: KKQNTLREVR KTLLSQGVTG YMQFIPHARV PVLQYVSNRF GISCDISIDN FAGRIKSKIF YWINTLDERF GDMVLLIKEW AKAQNINDPK SGSLNSYSLC
201: LLVLFHFQTS DPPILPPLNE IYEGNIAGDV TALYNEQHLD EVCAANIARF RLQNKGRRNE TSICRLLGTF FQKFARINAF TDNVISTYSG QIGRIQDDPS
301: WMTKSYHLFV EDPVERPDNA ARAVSMKGLD RIASAFNDAC HKFNSLEHID RNELLALLCT PVVGLKLGGK VIANSYQKTP QRNNQHTTTG GRAGRDQGQA
401: PRARGFAGIR PVHKDPLANT TAHETAVQYH NHQQATTVRQ TAIPYPGRNP QTHTTVHQTT PYQNHTVPQV YPTWPQTAEP YHNHNQQVYA TGLQTGPYQS
501: HNQVYAPRFQ TGPYQSRHHQ VYRAGLQPGG TYQIHNQHQQ VYNAGFQTDG PHQNQQRRKG YTPNHQTNRY TAMAARYEPV RGQFNNGSTR DSKSQAADTA
601: ASQR
001: MSRNPFLDPT LQEILQVIKP TRADRDTRIT VIDQLRDVLQ SVECLRGATV QPFGSFVSNL FTRWGDLDIS VDLFSGSSIL FTGKKQKQTL LGHLLRALRA
101: SGLWYKLQFV IHARVPILKV VSGHQRISCD ISIDNLDGLL KSRFLFWISE IDGRFRDLVL LVKEWAKAHN INDSKTGTFN SYSLSLLVIF HFQTCVPAIL
201: PPLRVIYPKS AVDDLTGVRK TAEESIAQVT AANIARFKSE RAKSVNRSSL SELLVSFFAK FSDINVKAQE FGVCPFTGRW ETISSNTTWL PKTYSLFVED
301: PFEQPVNAAR SVSRRNLDRI AQVFQITSRR LVSECNRNSI IGILTGQHIQ ESLYRTISLP SQHHANGMHN VRNLHGQARP QNQQMQQNWS QSYNTPNPPH
401: WPPLTQSRPQ QNWTQNNPRN LQGQPPVQGQ TWPVITQTQT QQKSPYKSGN RPLKNTSAGS SQNQGHIGKP SGHMNGVNSA RPAYTNGVNS ARPPSKIPSQ
501: GGQIWRPRHE Q
101: SGLWYKLQFV IHARVPILKV VSGHQRISCD ISIDNLDGLL KSRFLFWISE IDGRFRDLVL LVKEWAKAHN INDSKTGTFN SYSLSLLVIF HFQTCVPAIL
201: PPLRVIYPKS AVDDLTGVRK TAEESIAQVT AANIARFKSE RAKSVNRSSL SELLVSFFAK FSDINVKAQE FGVCPFTGRW ETISSNTTWL PKTYSLFVED
301: PFEQPVNAAR SVSRRNLDRI AQVFQITSRR LVSECNRNSI IGILTGQHIQ ESLYRTISLP SQHHANGMHN VRNLHGQARP QNQQMQQNWS QSYNTPNPPH
401: WPPLTQSRPQ QNWTQNNPRN LQGQPPVQGQ TWPVITQTQT QQKSPYKSGN RPLKNTSAGS SQNQGHIGKP SGHMNGVNSA RPAYTNGVNS ARPPSKIPSQ
501: GGQIWRPRHE Q
Arabidopsis Description
HESO1Protein HESO1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XET5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.