Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G090200.1 | Wheat | cytosol | 51.5 | 85.52 |
| HORVU6Hr1G012060.3 | Barley | cytosol, nucleus | 75.48 | 64.57 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus | 58.58 | 62.68 |
| Os10t0188300-01 | Rice | cytosol, nucleus, plastid | 57.49 | 56.72 |
| TraesCS6A01G067000.1 | Wheat | cytosol | 74.93 | 46.61 |
| TraesCSU01G117200.1 | Wheat | cytosol | 74.39 | 46.43 |
| Zm00001d015059_P001 | Maize | nucleus | 70.03 | 42.34 |
| OQU84248 | Sorghum | nucleus | 72.75 | 41.27 |
| VIT_15s0048g01340.t01 | Wine grape | nucleus | 62.67 | 31.81 |
| PGSC0003DMT400000387 | Potato | plastid | 59.67 | 30.89 |
| CDY27369 | Canola | nucleus | 58.86 | 30.0 |
| KRH48314 | Soybean | endoplasmic reticulum | 59.67 | 29.92 |
| CDY37053 | Canola | nucleus | 58.86 | 29.83 |
| KRH65203 | Soybean | nucleus | 59.4 | 29.82 |
| Bra039325.1-P | Field mustard | nucleus | 58.86 | 28.42 |
| AT2G45620.1 | Thale cress | nucleus | 58.86 | 28.27 |
| Solyc01g094000.2.1 | Tomato | nucleus | 59.67 | 28.26 |
| Os09t0570600-01 | Rice | cytosol | 19.35 | 22.9 |
| Os01t0846450-01 | Rice | cytosol | 11.44 | 20.39 |
| Os01t0846500-02 | Rice | cytosol | 19.07 | 18.37 |
| Os08t0559900-01 | Rice | nucleus | 22.07 | 13.94 |
Protein Annotations
| EnsemblPlants:Os02t0122100-00 | EnsemblPlantsGene:Os02g0122100 | Gene3D:1.10.1410.10 | Gene3D:3.30.460.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016740 | GO:GO:0016779 | InterPro:PAP_assoc | InterPro:Polymerase_NTP_transf_dom | PANTHER:PTHR12271 | PANTHER:PTHR12271:SF53 |
| PFAM:PF01909 | PFAM:PF03828 | ProteinID:BAS76718.1 | SEG:seg | SUPFAM:SSF81301 | SUPFAM:SSF81631 |
| UniParc:UPI000393C27B | UniProt:A0A0P0VE25 | MapMan:16.10.2.6.2 | : | : | : |
Description
Similar to JHL05D22.13 protein. (Os02t0122100-00)
Coordinates
chr2:+:1162134..1165062
Molecular Weight (calculated)
41846.2 Da
IEP (calculated)
4.825
GRAVY (calculated)
-0.412
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: NSSPCSPFQQ LGSPPDQPPP PPPRQRVGTR RWRVERRHDI DAFTPGLLSL YESLNPSEEH KAKQRQLIES LTNSVSKEWP NAQLHLYGSC ANSFGNSHSD
101: VDVCLQIDTA AEENIAELLL ALAETLRKDD FDNVEAITSA RVPIVKIADP GSGLSCDICV NNLFAVANTK LLKDYAQIDE RLLQLAFIVK HWAKLRGVNE
201: TYRGTLSSYA YVLMCISFLQ QREPKILPCL QAMEPTYTVV VDGTECAYFD QVDQLKDFGA ENKESIAELL WAFFHYWAFH HDYRNDVISV RMGNTISKQE
301: KNWTTRVGND RHLICIEDPF ETSHDLGRVV DRQTIRVLRE EFERAATILQ YDDDPCVALF EPYDYES
101: VDVCLQIDTA AEENIAELLL ALAETLRKDD FDNVEAITSA RVPIVKIADP GSGLSCDICV NNLFAVANTK LLKDYAQIDE RLLQLAFIVK HWAKLRGVNE
201: TYRGTLSSYA YVLMCISFLQ QREPKILPCL QAMEPTYTVV VDGTECAYFD QVDQLKDFGA ENKESIAELL WAFFHYWAFH HDYRNDVISV RMGNTISKQE
301: KNWTTRVGND RHLICIEDPF ETSHDLGRVV DRQTIRVLRE EFERAATILQ YDDDPCVALF EPYDYES
001: MADGGAEPPA PPSSINAGEF LLSILHGSPS PSSQGPQHHQ SFALDPAIAA IGPTVNNPFP PSNWQSNGHR PSNHNPPSWP LAFSPPHNLS PNFLGFPQFP
101: PSPFTTNQFD GNQRVSPEDA YRLGFPGTTN PAIQSMVQQQ QQQQLPPPQS ETRKLVFGSF SGDATQSLNG LHNGNLKYDS NQHEQLMRHP QSTLSNSNMD
201: PNLSHHRNHD LHEQRGGHSG RGNWGHIGNN GRGLKSTPPP PPPGFSSNQR GWDMSLGSKD DDRGMGRNHD QAMGEHSKVW NQSVDFSAEA NRLRGLSIQN
301: ESKFNLSQQI DHPGPPKGAS LHSVSAADAA DSFSMLNKEA RRGGERREEL GQLSKAKREG NANSDEIEDF GEDIVKSLLL EDETGEKDAN DGKKDSKTSR
401: EKESRVDNRG QRLLGQKARM VKMYMACRND IHRYDATFIA IYKSLIPAEE ELEKQRQLMA HLENLVAKEW PHAKLYLYGS CANSFGFPKS DIDVCLAIEG
501: DDINKSEMLL KLAEILESDN LQNVQALTRA RVPIVKLMDP VTGISCDICI NNVLAVVNTK LLRDYAQIDV RLRQLAFIVK HWAKSRRVNE TYQGTLSSYA
601: YVLMCIHFLQ QRRPPILPCL QEMEPTYSVR VDNIRCTYFD NVDRLRNFGS NNRETIAELV WGFFNYWAYA HDYAYNVVSV RTGSILGKRE KDWTRRVGND
701: RHLICIEDPF ETSHDLGRVV DKFSIRVLRE EFERAARIMH QDPNPCAKLL EPYIPEDNNG QGHN
101: PSPFTTNQFD GNQRVSPEDA YRLGFPGTTN PAIQSMVQQQ QQQQLPPPQS ETRKLVFGSF SGDATQSLNG LHNGNLKYDS NQHEQLMRHP QSTLSNSNMD
201: PNLSHHRNHD LHEQRGGHSG RGNWGHIGNN GRGLKSTPPP PPPGFSSNQR GWDMSLGSKD DDRGMGRNHD QAMGEHSKVW NQSVDFSAEA NRLRGLSIQN
301: ESKFNLSQQI DHPGPPKGAS LHSVSAADAA DSFSMLNKEA RRGGERREEL GQLSKAKREG NANSDEIEDF GEDIVKSLLL EDETGEKDAN DGKKDSKTSR
401: EKESRVDNRG QRLLGQKARM VKMYMACRND IHRYDATFIA IYKSLIPAEE ELEKQRQLMA HLENLVAKEW PHAKLYLYGS CANSFGFPKS DIDVCLAIEG
501: DDINKSEMLL KLAEILESDN LQNVQALTRA RVPIVKLMDP VTGISCDICI NNVLAVVNTK LLRDYAQIDV RLRQLAFIVK HWAKSRRVNE TYQGTLSSYA
601: YVLMCIHFLQ QRRPPILPCL QEMEPTYSVR VDNIRCTYFD NVDRLRNFGS NNRETIAELV WGFFNYWAYA HDYAYNVVSV RTGSILGKRE KDWTRRVGND
701: RHLICIEDPF ETSHDLGRVV DKFSIRVLRE EFERAARIMH QDPNPCAKLL EPYIPEDNNG QGHN
Arabidopsis Description
URT1UTP:RNA uridylyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:O64642]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.