Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G016420.3 | Barley | cytosol, nucleus | 91.87 | 93.11 |
| TraesCS3B01G108100.1 | Wheat | nucleus | 92.7 | 92.7 |
| TraesCS3D01G093200.1 | Wheat | nucleus | 89.22 | 91.34 |
| Os01t0169900-01 | Rice | plasma membrane | 63.35 | 65.86 |
| Zm00001d008708_P001 | Maize | extracellular | 58.87 | 63.06 |
| Zm00001d039686_P001 | Maize | nucleus | 58.87 | 62.5 |
| KXG31759 | Sorghum | nucleus | 59.04 | 60.54 |
| TraesCS1A01G113700.1 | Wheat | nucleus | 54.56 | 57.32 |
| GSMUA_Achr6P03180_001 | Banana | nucleus | 39.14 | 42.91 |
| VIT_14s0066g00800.t01 | Wine grape | nucleus | 38.31 | 41.03 |
| GSMUA_Achr2P14190_001 | Banana | nucleus | 35.82 | 40.15 |
| KRH56551 | Soybean | nucleus | 38.14 | 40.14 |
| KRG93222 | Soybean | nucleus | 36.82 | 38.41 |
| Solyc02g086520.2.1 | Tomato | nucleus | 34.33 | 37.98 |
| PGSC0003DMT400032802 | Potato | nucleus | 34.16 | 37.94 |
| CDX91045 | Canola | nucleus | 29.35 | 36.42 |
| PGSC0003DMT400072130 | Potato | nucleus | 31.18 | 36.15 |
| CDX85594 | Canola | nucleus | 29.19 | 36.14 |
| AT3G01560.1 | Thale cress | nucleus | 30.51 | 36.01 |
| AT5G14540.1 | Thale cress | nucleus | 32.34 | 35.65 |
| VIT_17s0000g08970.t01 | Wine grape | nucleus | 27.69 | 35.61 |
| Solyc12g035240.1.1 | Tomato | nucleus | 28.69 | 35.09 |
| Bra023474.1-P | Field mustard | nucleus | 31.01 | 34.89 |
| TraesCS3A01G292800.1 | Wheat | nucleus | 20.9 | 20.79 |
| TraesCS1A01G394400.1 | Wheat | nucleus | 14.59 | 16.64 |
| TraesCS3A01G272000.1 | Wheat | plastid | 13.1 | 14.85 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G092900.1 | EnsemblPlantsGene:TraesCS3A01G092900 | InterPro:DUF1421 | ncoils:Coil | PANTHER:PTHR31805 | PANTHER:PTHR31805:SF12 |
| PFAM:PF07223 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr3A:+:58927249..58930973
Molecular Weight (calculated)
63975.1 Da
IEP (calculated)
6.195
GRAVY (calculated)
-0.733
Length
603 amino acids
Sequence
(BLAST)
(BLAST)
001: MNTSQFMDKQ ILGLAASAAP SPSLAGGGSG GSELLDLMGP DPQEESEDGL RRRHHHSANG TATDVLPSYD FQPMRTATAA PAAAPPSWGS LDSNSKPASV
101: SASASSPYNL KSAGILENRV PKNVNHEEDR SNFGLVTIAD IDRTMKKYSD NLLYALEGVS SRLSQLEGRT HHLESSVDDF KLTIGNFNGS TDGKLRQLEN
201: MLREVQAGVQ IMRDKQEIVE TQLHLAKLQI PKTETQSSEN SGVGQADSRH QSVAAQQAGV QPQHQPQTFP ALPAPNAPPP PPTLQSQPPA QFLGHSSAPS
301: VPALPQEPYY TPSAQTTEAI HQQYQAPPVP QPQAPPAPQQ QYQAPPVPQP QAPPAPPQQY QAPPVPQAHA PPAPPQQYQA PPVPQAQAPP APPQQYQTPS
401: QFSQYSQQPQ STIVNPSSPL APPAPQQTEY APSHSYPPNV RTPSAYMPPP NESAPPFYGQ NPSMYEPPAV RPNSGPPPSY GAPGYGPQGG SSFSESYGYT
501: GSPSYRGNAG MKPTPFAPSG PSSGGSGNSY GTRLPTARIL PQAEPVSSSP TAASGNRVAL DDVVEKVATM GFSREQVRAT VRRLTENGQN VDLNVVLDKL
601: MNG
101: SASASSPYNL KSAGILENRV PKNVNHEEDR SNFGLVTIAD IDRTMKKYSD NLLYALEGVS SRLSQLEGRT HHLESSVDDF KLTIGNFNGS TDGKLRQLEN
201: MLREVQAGVQ IMRDKQEIVE TQLHLAKLQI PKTETQSSEN SGVGQADSRH QSVAAQQAGV QPQHQPQTFP ALPAPNAPPP PPTLQSQPPA QFLGHSSAPS
301: VPALPQEPYY TPSAQTTEAI HQQYQAPPVP QPQAPPAPQQ QYQAPPVPQP QAPPAPPQQY QAPPVPQAHA PPAPPQQYQA PPVPQAQAPP APPQQYQTPS
401: QFSQYSQQPQ STIVNPSSPL APPAPQQTEY APSHSYPPNV RTPSAYMPPP NESAPPFYGQ NPSMYEPPAV RPNSGPPPSY GAPGYGPQGG SSFSESYGYT
501: GSPSYRGNAG MKPTPFAPSG PSSGGSGNSY GTRLPTARIL PQAEPVSSSP TAASGNRVAL DDVVEKVATM GFSREQVRAT VRRLTENGQN VDLNVVLDKL
601: MNG
001: MNTCQFMDKQ IMDLSSSSSL PSTDFIDLMN NHDGDDHQKK QVIGDNGLDS KKEVIVPSYD FHPIRPTTAA RLSHSALDLA GSTTRVNWSA SDYKPVSTTS
101: PNTNFGSLDS IEPSKLVPDK GQNVFNTTIM SEIIDRTMKK HTDTLLHVME GVSARLSQLE TRTHNLENLV DDLKVSVDNS HGSTDGKMRQ LKNILVEVQS
201: GVQLLKDKQE ILEAQLSKHQ VSNQHAKTHS LHVDPTAQSP APVPMQQFPL TSFPQPPSST AAPSQPPSSQ LPPQLPTQFS SQQEPYCPPP SHPQPPPSNP
301: PPYQAPQTQT PHQPSYQSPP QQPQYPQQPP PSSGYNPEEQ PPYQMQSYPP NPPRQQPPAG STPSQQFYNP PQPQPSMYDG AGGRSNSGFP SGYLSEPYTY
401: SGSPMSSAKP PHISSNGTGY PQLSNSRPLP HALPMVSAVS SGGGSSSPRS ESRAPIDDVI DRVTTMGFPR DQVRATVRKL TENGQAVDLN VVLDKLMNEG
501: GAPPGGFFGG R
101: PNTNFGSLDS IEPSKLVPDK GQNVFNTTIM SEIIDRTMKK HTDTLLHVME GVSARLSQLE TRTHNLENLV DDLKVSVDNS HGSTDGKMRQ LKNILVEVQS
201: GVQLLKDKQE ILEAQLSKHQ VSNQHAKTHS LHVDPTAQSP APVPMQQFPL TSFPQPPSST AAPSQPPSSQ LPPQLPTQFS SQQEPYCPPP SHPQPPPSNP
301: PPYQAPQTQT PHQPSYQSPP QQPQYPQQPP PSSGYNPEEQ PPYQMQSYPP NPPRQQPPAG STPSQQFYNP PQPQPSMYDG AGGRSNSGFP SGYLSEPYTY
401: SGSPMSSAKP PHISSNGTGY PQLSNSRPLP HALPMVSAVS SGGGSSSPRS ESRAPIDDVI DRVTTMGFPR DQVRATVRKL TENGQAVDLN VVLDKLMNEG
501: GAPPGGFFGG R
Arabidopsis Description
Proline-rich receptor-like kinase, putative (DUF1421) [Source:UniProtKB/TrEMBL;Acc:F4J3J5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.