Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d008708_P001 | Maize | extracellular | 74.31 | 76.55 |
| Zm00001d039686_P001 | Maize | nucleus | 73.62 | 75.18 |
| KXG31759 | Sorghum | nucleus | 75.69 | 74.66 |
| Os05t0169400-01 | Rice | plastid | 59.48 | 64.37 |
| TraesCS3A01G092900.1 | Wheat | nucleus | 65.86 | 63.35 |
| HORVU3Hr1G016420.3 | Barley | cytosol, nucleus | 64.48 | 62.86 |
| TraesCS3B01G108100.1 | Wheat | nucleus | 65.17 | 62.69 |
| TraesCS3D01G093200.1 | Wheat | nucleus | 61.72 | 60.78 |
| GSMUA_Achr6P03180_001 | Banana | nucleus | 44.83 | 47.27 |
| VIT_14s0066g00800.t01 | Wine grape | nucleus | 43.62 | 44.94 |
| GSMUA_Achr2P14190_001 | Banana | nucleus | 41.21 | 44.42 |
| KRH56551 | Soybean | nucleus | 43.45 | 43.98 |
| KRG93222 | Soybean | nucleus | 42.41 | 42.56 |
| Solyc02g086520.2.1 | Tomato | nucleus | 37.59 | 40.0 |
| AT3G01560.1 | Thale cress | nucleus | 35.0 | 39.73 |
| CDX91045 | Canola | nucleus | 32.59 | 38.89 |
| CDX85594 | Canola | nucleus | 32.41 | 38.6 |
| PGSC0003DMT400032802 | Potato | nucleus | 35.52 | 37.94 |
| PGSC0003DMT400072130 | Potato | nucleus | 33.45 | 37.31 |
| AT5G14540.1 | Thale cress | nucleus | 35.17 | 37.29 |
| Bra023474.1-P | Field mustard | nucleus | 34.14 | 36.94 |
| Solyc12g035240.1.1 | Tomato | nucleus | 30.86 | 36.31 |
| VIT_17s0000g08970.t01 | Wine grape | nucleus | 29.14 | 36.03 |
| Os01t0754500-01 | Rice | nucleus | 23.79 | 23.23 |
| Os05t0561600-01 | Rice | plastid | 18.97 | 21.24 |
| Os01t0672800-01 | Rice | cytosol, nucleus | 15.34 | 19.56 |
Protein Annotations
| EMBL:AK121293 | EnsemblPlants:Os01t0169900-01 | EnsemblPlantsGene:Os01g0169900 | EntrezGene:4325199 | InterPro:DUF1421 | ncoils:Coil |
| PANTHER:PTHR31805 | PANTHER:PTHR31805:SF12 | PFAM:PF07223 | ProteinID:BAD68319.1 | ProteinID:BAF04050.2 | ProteinID:BAS70607.1 |
| ProteinID:EAZ10703.1 | RefSeq:XP_015648026.1 | SEG:seg | UniParc:UPI0000457E16 | UniProt:Q5VQG6 | MapMan:35.2 |
Description
Protein of unknown function DUF1421 family protein. (Os01t0169900-01)
Coordinates
chr1:-:3591827..3596152
Molecular Weight (calculated)
61293.2 Da
IEP (calculated)
6.398
GRAVY (calculated)
-0.703
Length
580 amino acids
Sequence
(BLAST)
(BLAST)
001: MNTSQFMDKQ ILGLAASAST SSGVGVGGGG PELLDLMSPN PQEEGEDRLR RRHSSSNGSA DDVLPSYDFQ PIRTTAPSAA ASASAAPASW GSLDSGSKAA
101: SASYNLKSAG VLEPHVLKKV SHEEDRSNFG TVTMADIDRT MKKYSDNLLH ALEGVSSRLS QLEGRTHHLE NSVDDLKITI GNYNGSTDGK LRQLENMLRE
201: VQAGVQILRD KQEIVETQLH LAKLQPPKSD ALASDNVGSS QTDSHQHAVA PQQAAIQPQH QALTSSQPLA LPALPAPNAP PPPPTLQSQP PSQYPGHLPH
301: SQVPPVPPSA PVPSVPALPR DPYYAPPAQP TETMHQQYQA PPVPQPQAPP APPQQYQTPP QFPQYSQPPQ SGMVNPSTPL PPAAPQQPEE AMSYAPPQSY
401: PPNVRPPSPY MPPPSGPAPP FYGQNQSMYE PPVGRPNSGP PPSYGAGGYG PQGGSGFSES YGYSGSPSHR GNAGMKSSPS PFAPSGPSSG GSGNYGRLPT
501: AQILPQAVPI NSSPSGSSGN RVPVDDVVEK VATMGFSREQ VRATVRRLTE NGQNVDLNVV LDKLMNDSDV QQPQKGWFGR
101: SASYNLKSAG VLEPHVLKKV SHEEDRSNFG TVTMADIDRT MKKYSDNLLH ALEGVSSRLS QLEGRTHHLE NSVDDLKITI GNYNGSTDGK LRQLENMLRE
201: VQAGVQILRD KQEIVETQLH LAKLQPPKSD ALASDNVGSS QTDSHQHAVA PQQAAIQPQH QALTSSQPLA LPALPAPNAP PPPPTLQSQP PSQYPGHLPH
301: SQVPPVPPSA PVPSVPALPR DPYYAPPAQP TETMHQQYQA PPVPQPQAPP APPQQYQTPP QFPQYSQPPQ SGMVNPSTPL PPAAPQQPEE AMSYAPPQSY
401: PPNVRPPSPY MPPPSGPAPP FYGQNQSMYE PPVGRPNSGP PPSYGAGGYG PQGGSGFSES YGYSGSPSHR GNAGMKSSPS PFAPSGPSSG GSGNYGRLPT
501: AQILPQAVPI NSSPSGSSGN RVPVDDVVEK VATMGFSREQ VRATVRRLTE NGQNVDLNVV LDKLMNDSDV QQPQKGWFGR
001: MNTCQFMDKQ IMDLSSSSSL PSTDFIDLMN NHDGDDHQKK QVIGDNGLDS KKEVIVPSYD FHPIRPTTAA RLSHSALDLA GSTTRVNWSA SDYKPVSTTS
101: PNTNFGSLDS IEPSKLVPDK GQNVFNTTIM SEIIDRTMKK HTDTLLHVME GVSARLSQLE TRTHNLENLV DDLKVSVDNS HGSTDGKMRQ LKNILVEVQS
201: GVQLLKDKQE ILEAQLSKHQ VSNQHAKTHS LHVDPTAQSP APVPMQQFPL TSFPQPPSST AAPSQPPSSQ LPPQLPTQFS SQQEPYCPPP SHPQPPPSNP
301: PPYQAPQTQT PHQPSYQSPP QQPQYPQQPP PSSGYNPEEQ PPYQMQSYPP NPPRQQPPAG STPSQQFYNP PQPQPSMYDG AGGRSNSGFP SGYLSEPYTY
401: SGSPMSSAKP PHISSNGTGY PQLSNSRPLP HALPMVSAVS SGGGSSSPRS ESRAPIDDVI DRVTTMGFPR DQVRATVRKL TENGQAVDLN VVLDKLMNEG
501: GAPPGGFFGG R
101: PNTNFGSLDS IEPSKLVPDK GQNVFNTTIM SEIIDRTMKK HTDTLLHVME GVSARLSQLE TRTHNLENLV DDLKVSVDNS HGSTDGKMRQ LKNILVEVQS
201: GVQLLKDKQE ILEAQLSKHQ VSNQHAKTHS LHVDPTAQSP APVPMQQFPL TSFPQPPSST AAPSQPPSSQ LPPQLPTQFS SQQEPYCPPP SHPQPPPSNP
301: PPYQAPQTQT PHQPSYQSPP QQPQYPQQPP PSSGYNPEEQ PPYQMQSYPP NPPRQQPPAG STPSQQFYNP PQPQPSMYDG AGGRSNSGFP SGYLSEPYTY
401: SGSPMSSAKP PHISSNGTGY PQLSNSRPLP HALPMVSAVS SGGGSSSPRS ESRAPIDDVI DRVTTMGFPR DQVRATVRKL TENGQAVDLN VVLDKLMNEG
501: GAPPGGFFGG R
Arabidopsis Description
Proline-rich receptor-like kinase, putative (DUF1421) [Source:UniProtKB/TrEMBL;Acc:F4J3J5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.