Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G394400.1 | Wheat | nucleus | 66.99 | 65.6 |
| TraesCS1B01G422400.1 | Wheat | nucleus | 66.8 | 65.53 |
| HORVU1Hr1G086930.4 | Barley | nucleus | 64.86 | 63.28 |
| OQU78421 | Sorghum | plastid | 62.16 | 62.04 |
| TraesCS1D01G402000.1 | Wheat | nucleus | 61.39 | 59.89 |
| Zm00001d038998_P001 | Maize | plastid | 58.49 | 57.82 |
| Zm00001d009555_P003 | Maize | endoplasmic reticulum, vacuole | 54.44 | 54.02 |
| Os01t0672800-01 | Rice | cytosol, nucleus | 37.26 | 42.42 |
| KRH55962 | Soybean | nucleus | 14.48 | 36.76 |
| VIT_12s0028g03740.t01 | Wine grape | nucleus | 10.23 | 35.1 |
| GSMUA_Achr4P07980_001 | Banana | nucleus | 31.08 | 33.75 |
| Os01t0754500-01 | Rice | nucleus | 34.17 | 29.8 |
| GSMUA_Achr4P15050_001 | Banana | nucleus | 26.06 | 27.27 |
| Solyc10g008340.2.1 | Tomato | extracellular | 28.57 | 27.16 |
| Solyc07g053990.2.1 | Tomato | nucleus | 26.06 | 27.11 |
| PGSC0003DMT400034191 | Potato | nucleus | 28.38 | 26.82 |
| CDY18985 | Canola | nucleus | 24.71 | 26.72 |
| AT4G28300.1 | Thale cress | nucleus | 24.71 | 25.81 |
| CDX89188 | Canola | nucleus | 23.36 | 25.74 |
| KRH25575 | Soybean | nucleus | 26.45 | 25.66 |
| Bra026268.1-P | Field mustard | nucleus | 23.55 | 25.63 |
| KRH26948 | Soybean | nucleus | 26.06 | 25.38 |
| CDY14248 | Canola | nucleus | 23.75 | 25.05 |
| PGSC0003DMT400047245 | Potato | nucleus | 25.87 | 24.95 |
| CDY67879 | Canola | nucleus | 22.97 | 24.9 |
| Bra010376.1-P | Field mustard | nucleus | 23.55 | 24.85 |
| CDY29896 | Canola | nucleus | 23.36 | 24.85 |
| Bra024211.1-P | Field mustard | nucleus | 23.36 | 24.85 |
| CDY25250 | Canola | nucleus | 23.36 | 24.59 |
| CDX97433 | Canola | nucleus | 23.36 | 24.59 |
| KRH22387 | Soybean | nucleus | 24.9 | 24.02 |
| VIT_12s0028g03730.t01 | Wine grape | nucleus | 14.67 | 21.71 |
| Os05t0169400-01 | Rice | plastid | 20.46 | 19.78 |
| KRH55961 | Soybean | cytosol | 10.04 | 19.05 |
| Os01t0169900-01 | Rice | plasma membrane | 21.24 | 18.97 |
Protein Annotations
| EMBL:AK241065 | EnsemblPlants:Os05t0561600-01 | EnsemblPlantsGene:Os05g0561600 | EntrezGene:4339604 | InterPro:DUF1421 | ncoils:Coil |
| PANTHER:PTHR31805 | PANTHER:PTHR31805:SF4 | PFAM:PF07223 | ProteinID:AAU10648.1 | ProteinID:BAS95325.1 | ProteinID:EEE64682.1 |
| RefSeq:XP_015639657.1 | SEG:seg | UniParc:UPI000042AB9D | UniProt:Q688Y1 | MapMan:35.2 | : |
Description
Protein of unknown function DUF1421 domain containing protein. (Os05t0561600-01)
Coordinates
chr5:+:27944014..27947970
Molecular Weight (calculated)
57466.7 Da
IEP (calculated)
6.822
GRAVY (calculated)
-0.566
Length
518 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPARPAAA SVSGAFGLSA DPARCSFDQT LRREDFQDNR LLRSLVNIHE QETYSREIIT EAIESCMKKQ ADNLVNTLDV ISGRLSQLEL YCYKLERSIG
101: ELRSDVMDYH GEANINFRCL EKHVKEVQNS VQVLQDKQEL AETQKELTKL QILHEESAQK SEGTAPSVLM TKEIDGSMPV AKHELALVPL HQVNAAQSPA
201: MQFQSCNGLV LQQLVPVSLS TQQDQQHMNQ ATLYCMQTQA HVEHRQAQPF QPAPQPVQRH TQNTPQTVVE AQQVTSQAPD FYIQPQQQWA HQTGQQVHQA
301: RQPQPQVVQQ QHYNNIQQVP AQIVQMQTSS PQAQSAPHVT LLYPPYGSQQ PACANSEPRS RSMAMQPSYS TISSSQRNHH EVAPVYVQSN TISVPLAEHS
401: IQSQQPPQLQ SFGNGSFKPS KVSLHGVASY TVQGNAQAYN TAYGNPSNNA ATVVAVLPQQ AQSSAPMVLH HLGPQSLQNH PIDMVEKVAR MGYFKDQAES
501: MALRMATAGQ NVEFKHLA
101: ELRSDVMDYH GEANINFRCL EKHVKEVQNS VQVLQDKQEL AETQKELTKL QILHEESAQK SEGTAPSVLM TKEIDGSMPV AKHELALVPL HQVNAAQSPA
201: MQFQSCNGLV LQQLVPVSLS TQQDQQHMNQ ATLYCMQTQA HVEHRQAQPF QPAPQPVQRH TQNTPQTVVE AQQVTSQAPD FYIQPQQQWA HQTGQQVHQA
301: RQPQPQVVQQ QHYNNIQQVP AQIVQMQTSS PQAQSAPHVT LLYPPYGSQQ PACANSEPRS RSMAMQPSYS TISSSQRNHH EVAPVYVQSN TISVPLAEHS
401: IQSQQPPQLQ SFGNGSFKPS KVSLHGVASY TVQGNAQAYN TAYGNPSNNA ATVVAVLPQQ AQSSAPMVLH HLGPQSLQNH PIDMVEKVAR MGYFKDQAES
501: MALRMATAGQ NVEFKHLA
001: MASGSSGRVN SGSKGFDFGS DDILCSYDDY TNQDSSNGPH SDPAIAASNS NKEFHKTRMA RSSVFPTSSY SPPEDSLSQD ITDTVERTMK MYADNMMRFL
101: EGLSSRLSQL ELYCYNLDKT IGEMRSELTH AHEDADVKLR SLDKHLQEVH RSVQILRDKQ ELADTQKELA KLQLVQKESS SSSHSQHGED RVATPVPEPK
201: KSENTSDAHN QQLALALPHQ IAPQPQVQPQ PQPQQHQYYM PPPPTQLQNT PAPVPVSTPP SQLQAPPAQS QFMPPPPAPS HPSSAQTQSF PQYQQNWPPQ
301: PQARPQSSGG YPTYSPAPPG NQPPVESLPS SMQMQSPYSG PPQQSMQAYG YGAAPPPQAP PQQTKMSYSP QTGDGYLPSG PPPPSGYANA MYEGGRMQYP
401: PPQPQQQQQQ AHYLQGPQGG GYSPQPHQAG GGNIGAPPVL RSKYGELIEK LVSMGFRGDH VMAVIQRMEE SGQPIDFNTL LDRLSGQSSG GPPRGW
101: EGLSSRLSQL ELYCYNLDKT IGEMRSELTH AHEDADVKLR SLDKHLQEVH RSVQILRDKQ ELADTQKELA KLQLVQKESS SSSHSQHGED RVATPVPEPK
201: KSENTSDAHN QQLALALPHQ IAPQPQVQPQ PQPQQHQYYM PPPPTQLQNT PAPVPVSTPP SQLQAPPAQS QFMPPPPAPS HPSSAQTQSF PQYQQNWPPQ
301: PQARPQSSGG YPTYSPAPPG NQPPVESLPS SMQMQSPYSG PPQQSMQAYG YGAAPPPQAP PQQTKMSYSP QTGDGYLPSG PPPPSGYANA MYEGGRMQYP
401: PPQPQQQQQQ AHYLQGPQGG GYSPQPHQAG GGNIGAPPVL RSKYGELIEK LVSMGFRGDH VMAVIQRMEE SGQPIDFNTL LDRLSGQSSG GPPRGW
Arabidopsis Description
Formin-like protein (DUF1421) [Source:UniProtKB/TrEMBL;Acc:Q8VZR8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.