CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56551	Soybean	nucleus	73.01	73.65
VIT_14s0066g00800.t01	Wine grape	nucleus	50.52	51.87
PGSC0003DMT400032802	Potato	nucleus	45.33	48.25
Solyc02g086520.2.1	Tomato	nucleus	43.43	46.05
CDX91045	Canola	nucleus	38.58	45.88
CDX85594	Canola	nucleus	37.54	44.56
AT3G01560.1	Thale cress	nucleus	38.58	43.64
Bra023474.1-P	Field mustard	nucleus	39.62	42.72
PGSC0003DMT400072130	Potato	nucleus	38.41	42.69
Solyc12g035240.1.1	Tomato	nucleus	36.33	42.6
Os01t0169900-01	Rice	plasma membrane	42.56	42.41
HORVU1Hr1G025020.4	Barley	nucleus	40.83	41.33
TraesCS1D01G115300.1	Wheat	nucleus	40.66	40.94
TraesCS1A01G113700.1	Wheat	nucleus	40.66	40.94
TraesCS1B01G134000.1	Wheat	nucleus	40.66	40.66
GSMUA_Achr6P03180_001	Banana	nucleus	37.89	39.82
Zm00001d039686_P001	Maize	nucleus	39.1	39.79
Zm00001d008708_P001	Maize	extracellular	38.58	39.61
AT5G14540.1	Thale cress	nucleus	37.37	39.49
EES19114	Sorghum	nucleus	39.27	39.0
GSMUA_Achr2P14190_001	Banana	nucleus	35.99	38.66
KXG31759	Sorghum	nucleus	39.27	38.61
Os05t0169400-01	Rice	plastid	35.29	38.06
TraesCS3A01G092900.1	Wheat	nucleus	38.41	36.82
TraesCS3D01G093200.1	Wheat	nucleus	37.2	36.5
TraesCS3B01G108100.1	Wheat	nucleus	37.89	36.32
HORVU3Hr1G016420.3	Barley	cytosol, nucleus	37.2	36.13
KRH55962	Soybean	nucleus	8.3	23.53
KRH55961	Soybean	cytosol	10.55	22.34
KRH25575	Soybean	nucleus	20.42	22.1
KRH26948	Soybean	nucleus	18.69	20.3
KRH22387	Soybean	nucleus	18.51	19.93

Protein Annotations

EMBL:ACUP02011541	EnsemblPlants:KRG93222	EnsemblPlantsGene:GLYMA_19G004100	EntrezGene:100778494	InterPro:DUF1421	ncoils:Coil
PANTHER:PTHR31805	PANTHER:PTHR31805:SF2	PFAM:PF07223	ProteinID:KRG93222	ProteinID:KRG93222.1	SEG:seg
UniParc:UPI000233F194	UniProt:I1N5J4	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:325512..330426

Molecular Weight (calculated)

62849.8 Da

IEP (calculated)

6.251

GRAVY (calculated)

-0.885

Length

578 amino acids

Sequence
(BLAST)

001: MNTTPFMDKQ IMDLTHAHGS SSSSSTTQLQ SKDFIDLMKE PPQNQHNHHH HHLEDEDEEE KASRGNGISK DDIVPSYDFQ PIRPLAASNS NNFDSAAFSR
101: PWNSDSNSNA SPPILKNYNS LDSMEPAKVI VEKDQSAFDA TMLSEIDRTV KKHMENMLHV LEGVSARLTQ LETRTHHLEN SVDDLKVSVG NSHGSTDGKL
201: RQMENSLREV QSGVQTIKDK QDIVQAQLQL AKLEVSKTDP QSETQTSTIT DPVQQAAFAP GQTQPQLPTP ANLPQSIPIV PPPNAPPQPS PQQGLPPPVH
301: LPNQFPQNQI PAAPQRDQYF PPPVQSQETP NQQYQLPLSQ QPHAQPGAPP HQQYQQIPHP QYPQPAPHLP QQQPPSHPSM NPPQLQSSLG HHVEEPPYPP
401: QNYPPNVRQP PSQSPTGPPP PQQFYGTPPH AYEPPSSRSG SGYSSGYGTL SGPAEQYRYG GPPQYAGTPA LKPQQLPTAS VAPSGGSGYP QLPTARVLPQ
501: AIPTASAVSG GSGSAGTGGR VSVDDVVDKV STMGFPRDHV RATVRKLTEN GQSVDLNAVL DKLMNDGEVQ PPRGWFGR

Best Arabidopsis Sequence Match ( AT3G01560.1 )
(BLAST)

001: MNTCQFMDKQ IMDLSSSSSL PSTDFIDLMN NHDGDDHQKK QVIGDNGLDS KKEVIVPSYD FHPIRPTTAA RLSHSALDLA GSTTRVNWSA SDYKPVSTTS
101: PNTNFGSLDS IEPSKLVPDK GQNVFNTTIM SEIIDRTMKK HTDTLLHVME GVSARLSQLE TRTHNLENLV DDLKVSVDNS HGSTDGKMRQ LKNILVEVQS
201: GVQLLKDKQE ILEAQLSKHQ VSNQHAKTHS LHVDPTAQSP APVPMQQFPL TSFPQPPSST AAPSQPPSSQ LPPQLPTQFS SQQEPYCPPP SHPQPPPSNP
301: PPYQAPQTQT PHQPSYQSPP QQPQYPQQPP PSSGYNPEEQ PPYQMQSYPP NPPRQQPPAG STPSQQFYNP PQPQPSMYDG AGGRSNSGFP SGYLSEPYTY
401: SGSPMSSAKP PHISSNGTGY PQLSNSRPLP HALPMVSAVS SGGGSSSPRS ESRAPIDDVI DRVTTMGFPR DQVRATVRKL TENGQAVDLN VVLDKLMNEG
501: GAPPGGFFGG R

Arabidopsis Description

Proline-rich receptor-like kinase, putative (DUF1421) [Source:UniProtKB/TrEMBL;Acc:F4J3J5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.