Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0169400-01 | Rice | plastid | 59.45 | 64.55 |
| TraesCS1A01G113700.1 | Wheat | nucleus | 61.86 | 62.72 |
| TraesCS1B01G134000.1 | Wheat | nucleus | 62.03 | 62.46 |
| HORVU1Hr1G025020.4 | Barley | nucleus | 60.65 | 61.82 |
| TraesCS1D01G115300.1 | Wheat | nucleus | 60.31 | 61.15 |
| KXG31759 | Sorghum | nucleus | 57.04 | 56.46 |
| GSMUA_Achr6P03180_001 | Banana | nucleus | 42.27 | 44.73 |
| VIT_14s0066g00800.t01 | Wine grape | nucleus | 42.1 | 43.52 |
| GSMUA_Achr2P14190_001 | Banana | nucleus | 37.8 | 40.89 |
| Solyc02g086520.2.1 | Tomato | nucleus | 37.63 | 40.18 |
| KRH56551 | Soybean | nucleus | 39.52 | 40.14 |
| KRG93222 | Soybean | nucleus | 39.0 | 39.27 |
| CDX91045 | Canola | nucleus | 31.79 | 38.07 |
| PGSC0003DMT400072130 | Potato | nucleus | 33.68 | 37.69 |
| PGSC0003DMT400032802 | Potato | nucleus | 35.05 | 37.57 |
| AT3G01560.1 | Thale cress | nucleus | 32.82 | 37.38 |
| CDX85594 | Canola | nucleus | 30.93 | 36.96 |
| VIT_17s0000g08970.t01 | Wine grape | nucleus | 29.55 | 36.67 |
| Solyc12g035240.1.1 | Tomato | nucleus | 30.76 | 36.31 |
| AT5G14540.1 | Thale cress | nucleus | 33.68 | 35.83 |
| Bra023474.1-P | Field mustard | nucleus | 32.47 | 35.26 |
| EES03625 | Sorghum | nucleus | 20.79 | 20.61 |
| OQU78421 | Sorghum | plastid | 18.04 | 20.23 |
| EES03419 | Sorghum | nucleus | 15.81 | 17.1 |
Protein Annotations
| EnsemblPlants:EES19114 | EnsemblPlantsGene:SORBI_3009G060400 | InterPro:DUF1421 | ncoils:Coil | PANTHER:PTHR31805 | PANTHER:PTHR31805:SF12 |
| PFAM:PF07223 | ProteinID:EES19114 | ProteinID:EES19114.1 | RefSeq:XP_002440684.1 | SEG:seg | unigene:Sbi.9785 |
| UniParc:UPI0001A88DD5 | UniProt:C5Z130 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:6343396..6347934
Molecular Weight (calculated)
60962.0 Da
IEP (calculated)
6.195
GRAVY (calculated)
-0.627
Length
582 amino acids
Sequence
(BLAST)
(BLAST)
001: MNASQFMDKQ IQGLAASASA SAAAASSPPA SGGLVDLMSP DPQEEAVSHG HGPGHRSLHG GANGTGNGAD EVLPSYDFQP IRPSAAAASA VPVGSAPATG
101: AWGSLDSKAA SPNLQGAGVL EPHVLKKVNH EEERSNFSAV TIADIDRTMK KYADNLLHAL ESVSSRLSQL EDRTYHLENS VGELKLTIGN NNGSTDGKLR
201: QFENTLREVQ AGVQILRDKQ EIVETQIQLA KLQMPKAEDV QSEAGQVDTM QQPAPSQPTI QSQNHAPPPS QPPVPLPALP APTAPPPPPA QNQPPTHFPG
301: HVPHPQVPSM PPALPAPSVT TIPQESYYPP SAQPTEATHQ QYQAPPAPQQ PQAPQPAPPQ HYQTLPQYAQ YSQPPPSASV NPTAALPPPV PQQPEEPAPY
401: GPPSQGYPPN VRAPPPYMPP PSGPAAPFYG PNPGMFDVSA ARPNSGPPLP YNAGYKPPAA GGFSESYGYA GSPSHHGNAG MKPPSPFALP GGSSGSYGRL
501: PTAQVLPQAA PVRSTPSSGS SGARVPIDDV IEKVATMGFS KEQVRATVRK LTENGQNVDL NVVLDKLMND TDAQPQRSWY GR
101: AWGSLDSKAA SPNLQGAGVL EPHVLKKVNH EEERSNFSAV TIADIDRTMK KYADNLLHAL ESVSSRLSQL EDRTYHLENS VGELKLTIGN NNGSTDGKLR
201: QFENTLREVQ AGVQILRDKQ EIVETQIQLA KLQMPKAEDV QSEAGQVDTM QQPAPSQPTI QSQNHAPPPS QPPVPLPALP APTAPPPPPA QNQPPTHFPG
301: HVPHPQVPSM PPALPAPSVT TIPQESYYPP SAQPTEATHQ QYQAPPAPQQ PQAPQPAPPQ HYQTLPQYAQ YSQPPPSASV NPTAALPPPV PQQPEEPAPY
401: GPPSQGYPPN VRAPPPYMPP PSGPAAPFYG PNPGMFDVSA ARPNSGPPLP YNAGYKPPAA GGFSESYGYA GSPSHHGNAG MKPPSPFALP GGSSGSYGRL
501: PTAQVLPQAA PVRSTPSSGS SGARVPIDDV IEKVATMGFS KEQVRATVRK LTENGQNVDL NVVLDKLMND TDAQPQRSWY GR
001: MQSFDLIKSA LFSDKQIMDL MNDNSNNSQD GDHQNYRVGD NGLESKKEAI FPSYDFQPMR PNASAGLSHH ALDLAGSVNS TAARVWDASD PKPVSASSAR
101: SYGSMDSLEP SKLFAEKDRN SPESAIISAI DRTMKAHADK LLHVMEGVSA RLTQLETRTR DLENLVDDVK VSVGNSHGKT DGKLRQLENI MLEVQNGVQL
201: LKDKQEIVEA QLQLSKLQLS KVNQQPETHS THVEPTAQPP ASLPQPPASA AAPPSLTQQG LPPQQFIQPP ASQHGLSPPS LQLPQLPNQF SPQQEPYFPP
301: SGQSQPPPTI QPPYQPPPPT QSLHQPPYQP PPQQPQYPQQ PPPQLQHPSG YNPEEPPYPQ QSYPPNPPRQ PPSHPPPGSA PSQQYYNAPP TPPSMYDGPG
401: GRSNSGFPSG YSPESYPYTG PPSQYGNTPS VKPTHQSGSG SGAYPQLPMA RPLPQGLPMA SAISSGGSGG GSDSPRSGNR APVDDVIDKV VSMGFPRDQV
501: RGTVRTLTEN GQAVDLNVVL DKLMNGDRGA MMQQQQQQPP RGWFGGR
101: SYGSMDSLEP SKLFAEKDRN SPESAIISAI DRTMKAHADK LLHVMEGVSA RLTQLETRTR DLENLVDDVK VSVGNSHGKT DGKLRQLENI MLEVQNGVQL
201: LKDKQEIVEA QLQLSKLQLS KVNQQPETHS THVEPTAQPP ASLPQPPASA AAPPSLTQQG LPPQQFIQPP ASQHGLSPPS LQLPQLPNQF SPQQEPYFPP
301: SGQSQPPPTI QPPYQPPPPT QSLHQPPYQP PPQQPQYPQQ PPPQLQHPSG YNPEEPPYPQ QSYPPNPPRQ PPSHPPPGSA PSQQYYNAPP TPPSMYDGPG
401: GRSNSGFPSG YSPESYPYTG PPSQYGNTPS VKPTHQSGSG SGAYPQLPMA RPLPQGLPMA SAISSGGSGG GSDSPRSGNR APVDDVIDKV VSMGFPRDQV
501: RGTVRTLTEN GQAVDLNVVL DKLMNGDRGA MMQQQQQQPP RGWFGGR
Arabidopsis Description
AT5G14540 protein [Source:UniProtKB/TrEMBL;Acc:B9DHK3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.