Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d012728_P001 | Maize | nucleus | 75.81 | 76.2 |
| Os01t0754500-01 | Rice | nucleus | 63.88 | 63.13 |
| TraesCS3D01G292600.1 | Wheat | nucleus | 58.77 | 56.93 |
| HORVU3Hr1G072520.1 | Barley | nucleus | 58.09 | 56.55 |
| TraesCS3B01G327600.1 | Wheat | nucleus | 57.92 | 56.38 |
| TraesCS3A01G292800.1 | Wheat | nucleus | 56.73 | 54.95 |
| KRH55962 | Soybean | nucleus | 16.7 | 48.04 |
| VIT_12s0028g03740.t01 | Wine grape | nucleus | 11.93 | 46.36 |
| GSMUA_Achr4P07980_001 | Banana | nucleus | 36.12 | 44.44 |
| Solyc07g053990.2.1 | Tomato | nucleus | 33.39 | 39.36 |
| GSMUA_Achr4P15050_001 | Banana | nucleus | 33.05 | 39.19 |
| KRH25575 | Soybean | nucleus | 34.92 | 38.39 |
| CDX89188 | Canola | nucleus | 30.15 | 37.66 |
| PGSC0003DMT400047245 | Potato | nucleus | 34.41 | 37.62 |
| Bra026268.1-P | Field mustard | nucleus | 30.49 | 37.6 |
| PGSC0003DMT400034191 | Potato | nucleus | 35.09 | 37.59 |
| AT4G28300.1 | Thale cress | nucleus | 31.52 | 37.3 |
| Bra010376.1-P | Field mustard | nucleus | 31.18 | 37.27 |
| Solyc10g008340.2.1 | Tomato | extracellular | 34.58 | 37.25 |
| CDY14248 | Canola | nucleus | 30.49 | 36.46 |
| CDY18985 | Canola | nucleus | 29.64 | 36.33 |
| CDY67879 | Canola | nucleus | 29.47 | 36.19 |
| CDY25250 | Canola | nucleus | 30.32 | 36.18 |
| CDX97433 | Canola | nucleus | 30.32 | 36.18 |
| CDY29896 | Canola | nucleus | 29.3 | 35.32 |
| Bra024211.1-P | Field mustard | nucleus | 29.3 | 35.32 |
| KRH26948 | Soybean | nucleus | 30.15 | 33.27 |
| KRH22387 | Soybean | nucleus | 29.47 | 32.22 |
| KRH55961 | Soybean | cytosol | 14.65 | 31.5 |
| OQU78421 | Sorghum | plastid | 26.92 | 30.44 |
| VIT_12s0028g03730.t01 | Wine grape | nucleus | 17.89 | 30.0 |
| EES03419 | Sorghum | nucleus | 25.04 | 27.32 |
| KXG31759 | Sorghum | nucleus | 23.34 | 23.3 |
| EES19114 | Sorghum | nucleus | 20.61 | 20.79 |
Protein Annotations
| EnsemblPlants:EES03625 | EnsemblPlantsGene:SORBI_3003G299000 | EntrezGene:8075592 | InterPro:DUF1421 | ncoils:Coil | PANTHER:PTHR31805 |
| PANTHER:PTHR31805:SF3 | PFAM:PF07223 | ProteinID:EES03625 | ProteinID:EES03625.1 | RefSeq:XP_002458505.1 | SEG:seg |
| unigene:Sbi.14532 | UniParc:UPI0001A84C8C | UniProt:C5XK67 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr3:-:63023213..63027714
Molecular Weight (calculated)
64669.4 Da
IEP (calculated)
6.723
GRAVY (calculated)
-0.994
Length
587 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVPGAPSGR GSGGGGGSRS FDFGADDVLC SYDDFAAPSE PKRPDPADKD FHDSRLGRPF VKPYEQESYG KEDVLSAVEK CMKKYADNLL RSLEGITSRL
101: SQLEIYCYKL ERSIGELRSD VLRDETDHRL KSLEKHLHEV HRSIQILRDK QELAEAQKEL AKFQLTQDTS KKKEDVPTPS IPEQKKLEEN PDTSNQQLAL
201: VLPHQVNLPS LAPRASESVQ QYKDQPVQQS APTPPVPQQD RYVLSQAIVY YPQCQAPGIQ DTQGQPLQPE VQYLPSRPAA QDVPVHAPSQ PPQTGNQTQP
301: QPYPPYQQQW HQQSPQPTPA PVAQTQQTFS QPFPPPAQKP QLSNVQQFSP QPVQQPQSNA QQYPPPVQPQ QSSPQLPQAM QPQHPPVQTQ MRPQTPPNYT
401: HYPPHQPLNP STETLPANVA MQGPYNTAAP SGASRSEPPY SYGGPGIPPS QPPPQHNMQR HQLPPSSQSS FGPPPSKGSY ASPTQYAPQG NPQGYNTGYA
501: YPPSGPPAVQ PQQMPPGGVG MSHPGSHMMR GHPYGEMMEK AITMGYPRDQ VLNVTQRMAE SGQPMDFNTL LDRLNEAGSG APPPRAW
101: SQLEIYCYKL ERSIGELRSD VLRDETDHRL KSLEKHLHEV HRSIQILRDK QELAEAQKEL AKFQLTQDTS KKKEDVPTPS IPEQKKLEEN PDTSNQQLAL
201: VLPHQVNLPS LAPRASESVQ QYKDQPVQQS APTPPVPQQD RYVLSQAIVY YPQCQAPGIQ DTQGQPLQPE VQYLPSRPAA QDVPVHAPSQ PPQTGNQTQP
301: QPYPPYQQQW HQQSPQPTPA PVAQTQQTFS QPFPPPAQKP QLSNVQQFSP QPVQQPQSNA QQYPPPVQPQ QSSPQLPQAM QPQHPPVQTQ MRPQTPPNYT
401: HYPPHQPLNP STETLPANVA MQGPYNTAAP SGASRSEPPY SYGGPGIPPS QPPPQHNMQR HQLPPSSQSS FGPPPSKGSY ASPTQYAPQG NPQGYNTGYA
501: YPPSGPPAVQ PQQMPPGGVG MSHPGSHMMR GHPYGEMMEK AITMGYPRDQ VLNVTQRMAE SGQPMDFNTL LDRLNEAGSG APPPRAW
001: MASGSSGRVN SGSKGFDFGS DDILCSYDDY TNQDSSNGPH SDPAIAASNS NKEFHKTRMA RSSVFPTSSY SPPEDSLSQD ITDTVERTMK MYADNMMRFL
101: EGLSSRLSQL ELYCYNLDKT IGEMRSELTH AHEDADVKLR SLDKHLQEVH RSVQILRDKQ ELADTQKELA KLQLVQKESS SSSHSQHGED RVATPVPEPK
201: KSENTSDAHN QQLALALPHQ IAPQPQVQPQ PQPQQHQYYM PPPPTQLQNT PAPVPVSTPP SQLQAPPAQS QFMPPPPAPS HPSSAQTQSF PQYQQNWPPQ
301: PQARPQSSGG YPTYSPAPPG NQPPVESLPS SMQMQSPYSG PPQQSMQAYG YGAAPPPQAP PQQTKMSYSP QTGDGYLPSG PPPPSGYANA MYEGGRMQYP
401: PPQPQQQQQQ AHYLQGPQGG GYSPQPHQAG GGNIGAPPVL RSKYGELIEK LVSMGFRGDH VMAVIQRMEE SGQPIDFNTL LDRLSGQSSG GPPRGW
101: EGLSSRLSQL ELYCYNLDKT IGEMRSELTH AHEDADVKLR SLDKHLQEVH RSVQILRDKQ ELADTQKELA KLQLVQKESS SSSHSQHGED RVATPVPEPK
201: KSENTSDAHN QQLALALPHQ IAPQPQVQPQ PQPQQHQYYM PPPPTQLQNT PAPVPVSTPP SQLQAPPAQS QFMPPPPAPS HPSSAQTQSF PQYQQNWPPQ
301: PQARPQSSGG YPTYSPAPPG NQPPVESLPS SMQMQSPYSG PPQQSMQAYG YGAAPPPQAP PQQTKMSYSP QTGDGYLPSG PPPPSGYANA MYEGGRMQYP
401: PPQPQQQQQQ AHYLQGPQGG GYSPQPHQAG GGNIGAPPVL RSKYGELIEK LVSMGFRGDH VMAVIQRMEE SGQPIDFNTL LDRLSGQSSG GPPRGW
Arabidopsis Description
Formin-like protein (DUF1421) [Source:UniProtKB/TrEMBL;Acc:Q8VZR8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.