Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES03625 | Sorghum | nucleus | 76.2 | 75.81 |
| Os01t0754500-01 | Rice | nucleus | 66.95 | 65.82 |
| TraesCS3A01G292800.1 | Wheat | nucleus | 62.16 | 59.9 |
| HORVU3Hr1G072520.1 | Barley | nucleus | 58.56 | 56.72 |
| TraesCS3D01G292600.1 | Wheat | nucleus | 58.73 | 56.6 |
| TraesCS3B01G327600.1 | Wheat | nucleus | 58.39 | 56.55 |
| VIT_12s0028g03740.t01 | Wine grape | nucleus | 12.5 | 48.34 |
| KRH55962 | Soybean | nucleus | 16.44 | 47.06 |
| GSMUA_Achr4P07980_001 | Banana | nucleus | 35.45 | 43.4 |
| GSMUA_Achr4P15050_001 | Banana | nucleus | 34.93 | 41.21 |
| KRH25575 | Soybean | nucleus | 35.27 | 38.58 |
| Solyc07g053990.2.1 | Tomato | nucleus | 32.88 | 38.55 |
| AT4G28300.1 | Thale cress | nucleus | 32.71 | 38.51 |
| CDX89188 | Canola | nucleus | 30.82 | 38.3 |
| Bra026268.1-P | Field mustard | nucleus | 31.16 | 38.24 |
| Bra010376.1-P | Field mustard | nucleus | 32.02 | 38.09 |
| PGSC0003DMT400034191 | Potato | nucleus | 35.62 | 37.96 |
| CDX97433 | Canola | nucleus | 31.85 | 37.8 |
| CDY25250 | Canola | nucleus | 31.85 | 37.8 |
| Solyc10g008340.2.1 | Tomato | extracellular | 35.1 | 37.61 |
| CDY14248 | Canola | nucleus | 31.34 | 37.27 |
| PGSC0003DMT400047245 | Potato | nucleus | 34.25 | 37.24 |
| CDY18985 | Canola | nucleus | 30.48 | 37.16 |
| Bra024211.1-P | Field mustard | nucleus | 29.97 | 35.93 |
| CDY29896 | Canola | nucleus | 29.97 | 35.93 |
| CDY67879 | Canola | nucleus | 29.28 | 35.77 |
| KRH26948 | Soybean | nucleus | 30.82 | 33.83 |
| KRH55961 | Soybean | cytosol | 15.24 | 32.6 |
| KRH22387 | Soybean | nucleus | 29.79 | 32.4 |
| VIT_12s0028g03730.t01 | Wine grape | nucleus | 19.18 | 32.0 |
| Zm00001d038998_P001 | Maize | plastid | 26.71 | 29.77 |
| Zm00001d009555_P003 | Maize | endoplasmic reticulum, vacuole | 26.54 | 29.69 |
| Zm00001d043906_P002 | Maize | nucleus | 26.03 | 27.69 |
| Zm00001d011562_P003 | Maize | plastid | 25.86 | 26.12 |
| Zm00001d039686_P001 | Maize | nucleus | 21.06 | 21.65 |
| Zm00001d008708_P001 | Maize | extracellular | 20.21 | 20.96 |
Protein Annotations
| EnsemblPlants:Zm00001d012728_P001 | EnsemblPlants:Zm00001d012728_T001 | EnsemblPlantsGene:Zm00001d012728 | EntrezGene:100383096 | InterPro:DUF1421 | ncoils:Coil |
| PANTHER:PTHR31805 | PANTHER:PTHR31805:SF3 | PFAM:PF07223 | ProteinID:AQL00407.1 | SEG:seg | UniParc:UPI000221F4A4 |
| UniProt:K7VQ06 | MapMan:35.2 | : | : | : | : |
Description
Putative DUF1421 domain family protein
Coordinates
chr8:+:179391080..179396140
Molecular Weight (calculated)
64461.3 Da
IEP (calculated)
6.569
GRAVY (calculated)
-0.964
Length
584 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVPGAPAGG GSRSFDFGAD DVLCSYDDFA ASSEPKRPDP ADSAPDFHDS RLGRPFVKPY EQESYGKEDV LSAVEKCMKK YADNLLRSLE GITSRLSQLE
101: IYCYKLERSI GELRSDVLRD ETDHRLKSLE KHLNEVHRSI QILRDKQELA EAQKELAKFQ LTQDTSKKKE DVPTSIPEQK KLEENPDTSN QQLALVLPHQ
201: VNLPSLAPRA SESVQQYKNQ PVQPSDPTPP VPQQDRYVLS QAIVYYPQRQ APGIQDTQGQ KLQPEVQYLP ARSPAQDVPV HAPSQPPQAG NQTQPQPYPP
301: YQQQWHQQSS QPAPAPVAQT QQTFSQPFPP PAQQPQLSNV QQFPPQPVQQ PQSNAQQYPP PVQPQQSSPQ LPQAMQPQHP PMQTQMRPQT PPNYPHYPPH
401: QPLNPTPETL PGNVAMQGSY NTAVPSGANR PELPYSYGGA GIPLSQSQPL PQHNMQRHQL PPSSQGSFGP PPSKGSYAGS PQYAPQGNPQ GYSTGYAYPP
501: NGPPAVQPQQ MPPGGVGMSH PASHMMRGHP YGEMMEKAIT MGYPRDQVLN VTQRMAESGQ SMDFNTLLDR LNEAGSGAPP PRAW
101: IYCYKLERSI GELRSDVLRD ETDHRLKSLE KHLNEVHRSI QILRDKQELA EAQKELAKFQ LTQDTSKKKE DVPTSIPEQK KLEENPDTSN QQLALVLPHQ
201: VNLPSLAPRA SESVQQYKNQ PVQPSDPTPP VPQQDRYVLS QAIVYYPQRQ APGIQDTQGQ KLQPEVQYLP ARSPAQDVPV HAPSQPPQAG NQTQPQPYPP
301: YQQQWHQQSS QPAPAPVAQT QQTFSQPFPP PAQQPQLSNV QQFPPQPVQQ PQSNAQQYPP PVQPQQSSPQ LPQAMQPQHP PMQTQMRPQT PPNYPHYPPH
401: QPLNPTPETL PGNVAMQGSY NTAVPSGANR PELPYSYGGA GIPLSQSQPL PQHNMQRHQL PPSSQGSFGP PPSKGSYAGS PQYAPQGNPQ GYSTGYAYPP
501: NGPPAVQPQQ MPPGGVGMSH PASHMMRGHP YGEMMEKAIT MGYPRDQVLN VTQRMAESGQ SMDFNTLLDR LNEAGSGAPP PRAW
001: MASGSSGRVN SGSKGFDFGS DDILCSYDDY TNQDSSNGPH SDPAIAASNS NKEFHKTRMA RSSVFPTSSY SPPEDSLSQD ITDTVERTMK MYADNMMRFL
101: EGLSSRLSQL ELYCYNLDKT IGEMRSELTH AHEDADVKLR SLDKHLQEVH RSVQILRDKQ ELADTQKELA KLQLVQKESS SSSHSQHGED RVATPVPEPK
201: KSENTSDAHN QQLALALPHQ IAPQPQVQPQ PQPQQHQYYM PPPPTQLQNT PAPVPVSTPP SQLQAPPAQS QFMPPPPAPS HPSSAQTQSF PQYQQNWPPQ
301: PQARPQSSGG YPTYSPAPPG NQPPVESLPS SMQMQSPYSG PPQQSMQAYG YGAAPPPQAP PQQTKMSYSP QTGDGYLPSG PPPPSGYANA MYEGGRMQYP
401: PPQPQQQQQQ AHYLQGPQGG GYSPQPHQAG GGNIGAPPVL RSKYGELIEK LVSMGFRGDH VMAVIQRMEE SGQPIDFNTL LDRLSGQSSG GPPRGW
101: EGLSSRLSQL ELYCYNLDKT IGEMRSELTH AHEDADVKLR SLDKHLQEVH RSVQILRDKQ ELADTQKELA KLQLVQKESS SSSHSQHGED RVATPVPEPK
201: KSENTSDAHN QQLALALPHQ IAPQPQVQPQ PQPQQHQYYM PPPPTQLQNT PAPVPVSTPP SQLQAPPAQS QFMPPPPAPS HPSSAQTQSF PQYQQNWPPQ
301: PQARPQSSGG YPTYSPAPPG NQPPVESLPS SMQMQSPYSG PPQQSMQAYG YGAAPPPQAP PQQTKMSYSP QTGDGYLPSG PPPPSGYANA MYEGGRMQYP
401: PPQPQQQQQQ AHYLQGPQGG GYSPQPHQAG GGNIGAPPVL RSKYGELIEK LVSMGFRGDH VMAVIQRMEE SGQPIDFNTL LDRLSGQSSG GPPRGW
Arabidopsis Description
Formin-like protein (DUF1421) [Source:UniProtKB/TrEMBL;Acc:Q8VZR8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.