Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017086_P001 | Maize | cytosol | 54.45 | 65.0 |
| TraesCS6B01G238200.1 | Wheat | nucleus | 44.5 | 55.92 |
| TraesCS6D01G192700.1 | Wheat | nucleus | 42.41 | 52.94 |
| Os02t0595200-00 | Rice | nucleus | 45.03 | 49.14 |
| HORVU6Hr1G053590.1 | Barley | mitochondrion | 42.93 | 39.05 |
| PGSC0003DMT400046830 | Potato | nucleus | 28.27 | 38.3 |
| KRH57138 | Soybean | nucleus | 28.8 | 38.19 |
| KRH03218 | Soybean | nucleus | 28.8 | 37.16 |
| Bra013826.1-P | Field mustard | nucleus | 24.08 | 33.58 |
| AT4G24700.1 | Thale cress | nucleus | 23.56 | 31.47 |
| CDY11030 | Canola | nucleus | 20.94 | 28.57 |
Protein Annotations
| EnsemblPlants:KXG30545 | EnsemblPlantsGene:SORBI_3004G201800 | PANTHER:PTHR34665 | PANTHER:PTHR34665:SF1 | ProteinID:KXG30545 | ProteinID:KXG30545.1 |
| SEG:seg | UniParc:UPI0007F28628 | UniProt:A0A194YRU0 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr4:+:55381939..55385649
Molecular Weight (calculated)
20132.5 Da
IEP (calculated)
11.137
GRAVY (calculated)
-0.493
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSSSAGSRA SRDVDVDVEL LKAVAQAWHA QSGNPRPSSR AASGAGANDP AGGAGARARA GAAPHRPSRF KLEAMAAAAA PAPAPDARRA RQSSWDFAQS
101: LWDPYELVAV SRRLESGLVI ADHAAAAAAA PQDGGDARGA AEKRRRESGR SLRNLFLRST SKSAHRLYHP TDYPLSPVVE RTPLYFITPL S
101: LWDPYELVAV SRRLESGLVI ADHAAAAAAA PQDGGDARGA AEKRRRESGR SLRNLFLRST SKSAHRLYHP TDYPLSPVVE RTPLYFITPL S
001: MRKKREAKDE NEEEEEEKKK RLELMKAAAQ AWLSHSQTSK HTVLEFDAQR KHAFVKGKAS RFKTEALSAK HHPSFLDWEF GQSLWDPYEI LSVSKKLERE
101: LTLEEQTFSS SDNDGLKKMK KKKTRDSRNS LRSLFTRSSS KRF
101: LTLEEQTFSS SDNDGLKKMK KKKTRDSRNS LRSLFTRSSS KRF
Arabidopsis Description
Uncharacterized protein At4g24700 [Source:UniProtKB/TrEMBL;Acc:Q9SB65]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.