Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH03218 | Soybean | nucleus | 48.94 | 46.62 |
| KRH57138 | Soybean | nucleus | 47.52 | 46.53 |
| Bra013826.1-P | Field mustard | nucleus | 41.13 | 42.34 |
| AT4G24700.1 | Thale cress | nucleus | 38.3 | 37.76 |
| CDY11030 | Canola | nucleus | 35.46 | 35.71 |
| Zm00001d017086_P001 | Maize | cytosol | 35.46 | 31.25 |
| TraesCS6B01G238200.1 | Wheat | nucleus | 33.33 | 30.92 |
| TraesCS6D01G192700.1 | Wheat | nucleus | 33.33 | 30.72 |
| Os02t0595200-00 | Rice | nucleus | 35.46 | 28.57 |
| KXG30545 | Sorghum | nucleus | 38.3 | 28.27 |
| HORVU6Hr1G053590.1 | Barley | mitochondrion | 34.04 | 22.86 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400046830 | EnsemblPlantsGene:PGSC0003DMG400018186 | EntrezGene:102582940 | PANTHER:PTHR34665 | PANTHER:PTHR34665:SF1 | PGSC:PGSC0003DMG400018186 |
| RefSeq:XP_006344473.1 | UniParc:UPI00029639D2 | UniProt:M1BJQ4 | MapMan:35.2 | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400018186]
Coordinates
chr3:+:52007190..52008048
Molecular Weight (calculated)
16352.1 Da
IEP (calculated)
9.935
GRAVY (calculated)
-1.158
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKKQEPHQD EQHDVEILKA VAQAWHGHSS SRGTTTEFDA HRHNFKNKPS RFKLEAINKA TSREYDGTIS RWDFSQSLWD SYEILNVSKK LETGLMLDHP
101: LDGSIQIGQK RKESKNSLRK LLNRVSSRRY NEAESTLDKD G
101: LDGSIQIGQK RKESKNSLRK LLNRVSSRRY NEAESTLDKD G
001: MRKKREAKDE NEEEEEEKKK RLELMKAAAQ AWLSHSQTSK HTVLEFDAQR KHAFVKGKAS RFKTEALSAK HHPSFLDWEF GQSLWDPYEI LSVSKKLERE
101: LTLEEQTFSS SDNDGLKKMK KKKTRDSRNS LRSLFTRSSS KRF
101: LTLEEQTFSS SDNDGLKKMK KKKTRDSRNS LRSLFTRSSS KRF
Arabidopsis Description
Uncharacterized protein At4g24700 [Source:UniProtKB/TrEMBL;Acc:Q9SB65]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.